Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:13:51 (4162137): wrapper (7.7.26015): starting
10:13:51 (4162137): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 10:13:52] Arguments: --nthreads 12
[2025-11-22 10:13:52] Threads: 12
[2025-11-22 10:13:52] Checking for CVMFS
[2025-11-22 10:13:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 10:13:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 10:13:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 10:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 10:13:55] 2.13.0.0 2291514 5076 162192 153166 0 85 3793937 4096000 14400 130560 0 30854761 99.976 837753 578 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-22 10:13:55] CVMFS is ok
[2025-11-22 10:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 10:13:55] Checking for apptainer binary...
[2025-11-22 10:13:55] apptainer is not installed, using version from CVMFS
[2025-11-22 10:13:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 10:14:32] epyc7v12
[2025-11-22 10:14:32] apptainer works
[2025-11-22 10:14:32] Set ATHENA_PROC_NUMBER=12
[2025-11-22 10:14:32] Set ATHENA_CORE_NUMBER=12
[2025-11-22 10:14:32] Starting ATLAS job with PandaID=6891567937
[2025-11-22 10:14:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:49:35]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:49:35] 2025-11-22 19:48:12,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:49:35] 2025-11-22 19:48:12,951 | INFO     | time since job start (34127s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:14,861 | INFO     | monitor loop #2175: job 0:6891567937 is in state 'finished'
[2025-11-22 19:49:35] 2025-11-22 19:48:14,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:49:35] 2025-11-22 19:48:14,959 | INFO     | time since job start (34129s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:16,963 | INFO     | time since job start (34131s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:17,367 | INFO     | monitor loop #2176: job 0:6891567937 is in state 'finished'
[2025-11-22 19:49:35] 2025-11-22 19:48:17,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:49:35] 2025-11-22 19:48:18,971 | INFO     | time since job start (34133s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:19,881 | INFO     | monitor loop #2177: job 0:6891567937 is in state 'finished'
[2025-11-22 19:49:35] 2025-11-22 19:48:19,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:49:35] 2025-11-22 19:48:20,983 | INFO     | time since job start (34135s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:22,387 | INFO     | monitor loop #2178: job 0:6891567937 is in state 'finished'
[2025-11-22 19:49:35] 2025-11-22 19:48:22,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:49:35] 2025-11-22 19:48:22,991 | INFO     | time since job start (34137s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,028 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 19:49:35] 2025-11-22 19:48:24,076 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2390.7184296875007
[2025-11-22 19:49:35] 2025-11-22 19:48:24,133 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-6891567937/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,134 | INFO     | extracted standard info from prmon json
[2025-11-22 19:49:35] 2025-11-22 19:48:24,134 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:49:35] 2025-11-22 19:48:24,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:49:35] 2025-11-22 19:48:24,156 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:49:35] 2025-11-22 19:48:24,157 | INFO     | sum of square deviations: 50472209128.38278
[2025-11-22 19:49:35] 2025-11-22 19:48:24,166 | INFO     | sum of deviations: 606947221856.1875
[2025-11-22 19:49:35] 2025-11-22 19:48:24,166 | INFO     | mean x: 1763824118.7710624
[2025-11-22 19:49:35] 2025-11-22 19:48:24,166 | INFO     | mean y: 3062271.3534798534
[2025-11-22 19:49:35] 2025-11-22 19:48:24,167 | INFO     | intersect: -21207583492.297417
[2025-11-22 19:49:35] 2025-11-22 19:48:24,168 | INFO     | chi2: 63.48530254139415
[2025-11-22 19:49:35] 2025-11-22 19:48:24,169 | INFO     | sum of square deviations: 49098469447.73009
[2025-11-22 19:49:35] 2025-11-22 19:48:24,177 | INFO     | sum of deviations: 809549208400.6274
[2025-11-22 19:49:35] 2025-11-22 19:48:24,178 | INFO     | mean x: 1763823966.2828095
[2025-11-22 19:49:35] 2025-11-22 19:48:24,178 | INFO     | mean y: 3084754.6691312385
[2025-11-22 19:49:35] 2025-11-22 19:48:24,178 | INFO     | intersect: -29079334956.65077
[2025-11-22 19:49:35] 2025-11-22 19:48:24,179 | INFO     | chi2: 59.154978855581774
[2025-11-22 19:49:35] 2025-11-22 19:48:24,179 | INFO     | current chi2=59.154978855581774 (change=6.820986137679482 %)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,179 | INFO     | right removable region: 540
[2025-11-22 19:49:35] 2025-11-22 19:48:24,180 | INFO     | sum of square deviations: 49098046107.73006
[2025-11-22 19:49:35] 2025-11-22 19:48:24,191 | INFO     | sum of deviations: 352560695117.1545
[2025-11-22 19:49:35] 2025-11-22 19:48:24,191 | INFO     | mean x: 1763824271.2828095
[2025-11-22 19:49:35] 2025-11-22 19:48:24,191 | INFO     | mean y: 3090505.0055452865
[2025-11-22 19:49:35] 2025-11-22 19:48:24,192 | INFO     | intersect: -12662487057.562065
[2025-11-22 19:49:35] 2025-11-22 19:48:24,192 | INFO     | chi2: 57.68250517983616
[2025-11-22 19:49:35] 2025-11-22 19:48:24,192 | INFO     | current chi2=57.68250517983616 (change=9.140379157482007 %)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,192 | INFO     | left removable region: 10
[2025-11-22 19:49:35] 2025-11-22 19:48:24,193 | INFO     | sum of square deviations: 46163642705.752625
[2025-11-22 19:49:35] 2025-11-22 19:48:24,218 | INFO     | sum of deviations: 355304086643.59467
[2025-11-22 19:49:35] 2025-11-22 19:48:24,218 | INFO     | mean x: 1763824240.809434
[2025-11-22 19:49:35] 2025-11-22 19:48:24,218 | INFO     | mean y: 3146653.520754717
[2025-11-22 19:49:35] 2025-11-22 19:48:24,218 | INFO     | intersect: -13572340984.557968
[2025-11-22 19:49:35] 2025-11-22 19:48:24,219 | INFO     | chi2: 47.17014062737276
[2025-11-22 19:49:35] 2025-11-22 19:48:24,219 | INFO     | current memory leak: 7.70 B/s (using 530 data points, chi2=47.17)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,220 | INFO     | could have reported an average CPU frequency of 2393 MHz (21 samples)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | ..............................
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . Timing measurements:
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . get job = 0 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . initial setup = 12 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . payload setup = 211 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . stage-in = 0 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . payload execution = 33491 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . stage-out = 6 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,221 | INFO     | . log creation = 2 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,222 | INFO     | ..............................
[2025-11-22 19:49:35] 2025-11-22 19:48:24,823 | INFO     | 
[2025-11-22 19:49:35] 2025-11-22 19:48:24,823 | INFO     | job summary report
[2025-11-22 19:49:35] 2025-11-22 19:48:24,823 | INFO     | --------------------------------------------------
[2025-11-22 19:49:35] 2025-11-22 19:48:24,823 | INFO     | PanDA job id: 6891567937
[2025-11-22 19:49:35] 2025-11-22 19:48:24,823 | INFO     | task id: 47493068
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | errors: (none)
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | pilot state: finished 
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | transexitcode: 0
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | exeerrorcode: 0
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | exeerrordiag: 
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | exitcode: 0
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | exitmsg: OK
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | cpuconsumptiontime: 254357 s
[2025-11-22 19:49:35] 2025-11-22 19:48:24,824 | INFO     | nevents: 1000
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | neventsw: 0
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | pid: 4581
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | pgrp: 4581
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | corecount: 12
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | event service: False
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | sizes: {0: 2298592, 1: 2298847, 2: 2298847, 13: 2298875, 23: 2298931, 34: 2298959, 45: 2299115, 56: 2299143, 66: 2299171, 77: 2299199, 88: 2299255, 99: 2299563, 11
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | --------------------------------------------------
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | 
[2025-11-22 19:49:35] 2025-11-22 19:48:24,825 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-11-22 19:49:35] 2025-11-22 19:48:25,007 | INFO     | time since job start (34140s) is within the limit (172800.0s)
[2025-11-22 19:49:35] 2025-11-22 19:48:25,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,743 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,743 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | job 6891567937 has completed (purged errors)
[2025-11-22 19:49:35] 2025-11-22 19:48:25,745 | INFO     | overall cleanup function is called
[2025-11-22 19:49:35] 2025-11-22 19:48:26,795 | INFO     | --- collectZombieJob: --- 10, [4581]
[2025-11-22 19:49:35] 2025-11-22 19:48:26,795 | INFO     | zombie collector waiting for pid 4581
[2025-11-22 19:49:35] 2025-11-22 19:48:26,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:49:35] 2025-11-22 19:48:26,795 | INFO     | collected zombie processes
[2025-11-22 19:49:35] 2025-11-22 19:48:26,795 | INFO     | will attempt to kill all subprocesses of pid=4581
[2025-11-22 19:49:35] 2025-11-22 19:48:28,073 | INFO     | process IDs to be killed: [4581] (in reverse order)
[2025-11-22 19:49:35] 2025-11-22 19:48:37,806 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:49:35] 2025-11-22 19:48:37,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:49:35] 2025-11-22 19:48:37,837 | INFO     | did not find any defunct processes belonging to 4581
[2025-11-22 19:49:35] 2025-11-22 19:48:37,856 | INFO     | did not find any defunct processes belonging to 4581
[2025-11-22 19:49:35] 2025-11-22 19:48:37,858 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:49:35] 2025-11-22 19:48:37,858 | INFO     | ready for new job
[2025-11-22 19:49:35] 2025-11-22 19:48:37,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:49:35] 2025-11-22 19:48:37,863 | INFO     | ***************************************
[2025-11-22 19:49:35] 2025-11-22 19:48:37,863 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:49:35] 2025-11-22 19:48:37,863 | INFO     | ***************************************
[2025-11-22 19:49:35] 2025-11-22 19:48:37,863 | INFO     | 
[2025-11-22 19:49:35] 2025-11-22 19:48:37,897 | INFO     | architecture information:
[2025-11-22 19:49:35] 2025-11-22 19:48:37,899 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:49:35] 2025-11-22 19:48:37,993 | INFO     | cat /etc/os-release:
[2025-11-22 19:49:35] NAME="CentOS Linux"
[2025-11-22 19:49:35] VERSION="7 (Core)"
[2025-11-22 19:49:35] ID="centos"
[2025-11-22 19:49:35] ID_LIKE="rhel fedora"
[2025-11-22 19:49:35] VERSION_ID="7"
[2025-11-22 19:49:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:49:35] ANSI_COLOR="0;31"
[2025-11-22 19:49:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:49:35] HOME_URL="https://www.centos.org/"
[2025-11-22 19:49:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:49:35] 
[2025-11-22 19:49:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:49:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:49:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:49:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:49:35] 
[2025-11-22 19:49:35] 2025-11-22 19:48:37,994 | INFO     | ***************************************
[2025-11-22 19:49:35] 2025-11-22 19:48:38,499 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-11-22 19:49:35] 2025-11-22 19:48:38,952 | INFO     | sufficient remaining disk space (327408418816 B)
[2025-11-22 19:49:35] 2025-11-22 19:48:38,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:49:35] 2025-11-22 19:48:38,953 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:49:35] 2025-11-22 19:48:38,953 | INFO     | update_server=False
[2025-11-22 19:49:35] 2025-11-22 19:48:38,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:49:35] 2025-11-22 19:48:38,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:49:35] 2025-11-22 19:48:38,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:49:35] 2025-11-22 19:48:38,955 | INFO     | aborting loop
[2025-11-22 19:49:35] 2025-11-22 19:48:39,351 | INFO     | all data control threads have been joined
[2025-11-22 19:49:35] 2025-11-22 19:48:39,707 | INFO     | all payload control threads have been joined
[2025-11-22 19:49:35] 2025-11-22 19:48:39,959 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:39,963 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:39,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:49:35] 2025-11-22 19:48:40,099 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,255 | INFO     | all job control threads have been joined
[2025-11-22 19:49:35] 2025-11-22 19:48:40,331 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,347 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,355 | INFO     | [data] control thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,487 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,535 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,715 | INFO     | [payload] control thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,851 | INFO     | [job] validate thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,963 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:40,979 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:41,263 | INFO     | [job] control thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:41,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:41,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:49:35] 2025-11-22 19:48:42,495 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:43,999 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:49:35] 2025-11-22 19:48:59,278 | INFO     | PID=4181427 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 19:49:35] 2025-11-22 19:48:59,278 | INFO     | .. there are 16 such processes running
[2025-11-22 19:49:35] 2025-11-22 19:48:59,279 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:49:35] 2025-11-22 19:48:59,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:49:35] 2025-11-22 19:48:59,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:49:35] 2025-11-22 19:49:22,648 [wrapper] supervise_pilot (15 min periods counter: 39)
[2025-11-22 19:49:35] 2025-11-22 19:49:23,195 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:49:35] 2025-11-22 19:49:24,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691323852608)>', '<ExcThread(monitor, started 140690864445184)>']
[2025-11-22 19:49:35] 2025-11-22 19:49:25,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:49:35] 2025-11-22 19:49:25,411 | INFO     | [monitor] control thread has ended
[2025-11-22 19:49:35] 2025-11-22 19:49:29,715 | INFO     | all workflow threads have been joined
[2025-11-22 19:49:35] 2025-11-22 19:49:29,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:49:35] 2025-11-22 19:49:29,717 | INFO     | traces error code: 0
[2025-11-22 19:49:35] 2025-11-22 19:49:29,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:49:35] 2025-11-22 19:49:29,969 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:49:35] 2025-11-22 19:49:30,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:49:35] 2025-11-22 19:49:30,203 [wrapper] pilotpid: 4181427
[2025-11-22 19:49:35] 2025-11-22 19:49:30,327 [wrapper] Pilot exit status: 0
[2025-11-22 19:49:35] 2025-11-22 19:49:30,815 [wrapper] pandaids: 6891567937
[2025-11-22 19:49:35] 2025-11-22 19:49:31,435 [wrapper] cleanup supervisor_pilot 1029902 4181428
[2025-11-22 19:49:35] 2025-11-22 19:49:31,515 [wrapper] Test setup, not cleaning
[2025-11-22 19:49:35] 2025-11-22 19:49:31,575 [wrapper] apfmon messages muted
[2025-11-22 19:49:35] 2025-11-22 19:49:31,735 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:49:35] 2025-11-22 19:49:31,915 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:49:35]  *** Error codes and diagnostics ***
[2025-11-22 19:49:35]     "exeErrorCode": 0,
[2025-11-22 19:49:35]     "exeErrorDiag": "",
[2025-11-22 19:49:35]     "pilotErrorCode": 0,
[2025-11-22 19:49:35]     "pilotErrorDiag": "",
[2025-11-22 19:49:35]  *** Listing of results directory ***
[2025-11-22 19:49:35] total 1311260
[2025-11-22 19:49:35] -rw-r--r-- 1 boinc boinc    576529 Nov 18 15:15 pilot3.tar.gz
[2025-11-22 19:49:35] -rw-r--r-- 1 boinc boinc      5112 Nov 18 15:32 queuedata.json
[2025-11-22 19:49:35] -rwx------ 1 boinc boinc     36292 Nov 18 15:33 runpilot2-wrapper.sh
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc       100 Nov 22 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:49:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 10:13 run_atlas
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc       105 Nov 22 10:13 job.xml
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc 408127498 Nov 22 10:13 EVNT.47493065._000180.pool.root.1
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc     15120 Nov 22 10:13 start_atlas.sh
[2025-11-22 19:49:35] drwxrwx--x 2 boinc boinc      4096 Nov 22 10:13 shared
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc    590102 Nov 22 10:13 input.tar.gz
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc      7040 Nov 22 10:13 init_data.xml
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc         0 Nov 22 10:13 boinc_setup_complete
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc         0 Nov 22 10:13 boinc_lockfile
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc      2773 Nov 22 10:14 pandaJob.out
[2025-11-22 19:49:35] -rw------- 1 boinc boinc    989768 Nov 22 10:19 agis_schedconf.cvmfs.json
[2025-11-22 19:49:35] drwx------ 5 boinc boinc      4096 Nov 22 10:19 pilot3
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc       533 Nov 22 19:04 boinc_task_state.xml
[2025-11-22 19:49:35] -rw------- 1 boinc boinc 917302549 Nov 22 19:45 HITS.47493068._001800.pool.root.1
[2025-11-22 19:49:35] -rw------- 1 boinc boinc      1038 Nov 22 19:46 memory_monitor_summary.json
[2025-11-22 19:49:35] -rw------- 1 boinc boinc   1526164 Nov 22 19:46 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:49:35] -rw------- 1 boinc boinc   2237589 Nov 22 19:46 log.47493068._001800.job.log.tgz.1
[2025-11-22 19:49:35] -rw------- 1 boinc boinc      8565 Nov 22 19:48 heartbeat.json
[2025-11-22 19:49:35] -rw------- 1 boinc boinc        95 Nov 22 19:48 pilot_heartbeat.json
[2025-11-22 19:49:35] -rw------- 1 boinc boinc      4848 Nov 22 19:49 pilotlog.txt
[2025-11-22 19:49:35] -rw------- 1 boinc boinc   4450584 Nov 22 19:49 log.47493068._001800.job.log.1
[2025-11-22 19:49:35] -rw------- 1 boinc boinc       353 Nov 22 19:49 output.list
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc       620 Nov 22 19:49 runtime_log
[2025-11-22 19:49:35] -rw------- 1 boinc boinc   6707200 Nov 22 19:49 result.tar.gz
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc      8192 Nov 22 19:49 boinc_mmap_file
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc        29 Nov 22 19:49 wrapper_checkpoint.txt
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc      9008 Nov 22 19:49 runtime_log.err
[2025-11-22 19:49:35] -rw------- 1 boinc boinc       660 Nov 22 19:49 halLDmXtcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFKFKDm4goohm.diag
[2025-11-22 19:49:35] -rw-rw-r-- 1 boinc boinc     21570 Nov 22 19:49 stderr.txt
[2025-11-22 19:49:35] HITS file was successfully produced:
[2025-11-22 19:49:35] -rw------- 1 boinc boinc 917302549 Nov 22 19:45 shared/HITS.pool.root.1
[2025-11-22 19:49:35]  *** Contents of shared directory: ***
[2025-11-22 19:49:35] total 1301524
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc 408127498 Nov 22 10:13 ATLAS.root_0
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc     15120 Nov 22 10:13 start_atlas.sh
[2025-11-22 19:49:35] -rw-r--r-- 2 boinc boinc    590102 Nov 22 10:13 input.tar.gz
[2025-11-22 19:49:35] -rw------- 1 boinc boinc 917302549 Nov 22 19:45 HITS.pool.root.1
[2025-11-22 19:49:35] -rw------- 1 boinc boinc   6707200 Nov 22 19:49 result.tar.gz
19:49:37 (4162137): run_atlas exited; CPU time 255444.909794
19:49:37 (4162137): called boinc_finish(0)

</stderr_txt>
]]>

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