Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:52:30 (15035): wrapper (7.7.26015): starting
20:52:30 (15035): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 20:52:30] Arguments: --nthreads 8
[2025-11-21 20:52:30] Threads: 8
[2025-11-21 20:52:30] Checking for CVMFS
[2025-11-21 20:52:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:52:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:52:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:52:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:52:33] 2.11.2.0 27084 278440 140044 153141 3 241 14598108 25165824 4009 130560 2 134575314 99.878 76279355 3058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 20:52:33] CVMFS is ok
[2025-11-21 20:52:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:52:33] Checking for apptainer binary...
[2025-11-21 20:52:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 20:52:33] Running /usr/bin/apptainer --version
[2025-11-21 20:52:33] apptainer version 1.3.2-1.el7
[2025-11-21 20:52:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:52:36] cg-vwn405.simple-grid.lan
[2025-11-21 20:52:36] apptainer works
[2025-11-21 20:52:36] Set ATHENA_PROC_NUMBER=8
[2025-11-21 20:52:36] Set ATHENA_CORE_NUMBER=8
[2025-11-21 20:52:36] Starting ATLAS job with PandaID=6891589336
[2025-11-21 20:52:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:45:30]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:45:30] 2025-11-22 21:44:48,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:45:30] 2025-11-22 21:44:48,986 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:45:30] 2025-11-22 21:44:48,987 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 22:45:30] 2025-11-22 21:44:48,989 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6891589336/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:45:30] 2025-11-22 21:44:48,990 | INFO     | extracted standard info from prmon json
[2025-11-22 22:45:30] 2025-11-22 21:44:48,990 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:45:30] 2025-11-22 21:44:48,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:45:30] 2025-11-22 21:44:49,020 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:45:30] 2025-11-22 21:44:49,022 | INFO     | sum of square deviations: 1086802971648.0405
[2025-11-22 22:45:30] 2025-11-22 21:44:49,146 | INFO     | sum of deviations: 3358139469943.0356
[2025-11-22 22:45:30] 2025-11-22 21:44:49,146 | INFO     | mean x: 1763801479.3265307
[2025-11-22 22:45:30] 2025-11-22 21:44:49,147 | INFO     | mean y: 2865988.423304806
[2025-11-22 22:45:30] 2025-11-22 21:44:49,147 | INFO     | intersect: -5447147969.385896
[2025-11-22 22:45:30] 2025-11-22 21:44:49,149 | INFO     | chi2: 10.694187613712282
[2025-11-22 22:45:30] 2025-11-22 21:44:49,151 | INFO     | sum of square deviations: 1076106762396.7129
[2025-11-22 22:45:30] 2025-11-22 21:44:49,214 | INFO     | sum of deviations: 3854742706832.174
[2025-11-22 22:45:30] 2025-11-22 21:44:49,214 | INFO     | mean x: 1763801326.8309114
[2025-11-22 22:45:30] 2025-11-22 21:44:49,214 | INFO     | mean y: 2873067.4108322323
[2025-11-22 22:45:30] 2025-11-22 21:44:49,215 | INFO     | intersect: -6315273550.0861
[2025-11-22 22:45:30] 2025-11-22 21:44:49,216 | INFO     | chi2: 7.646729895173618
[2025-11-22 22:45:30] 2025-11-22 21:44:49,216 | INFO     | current chi2=7.646729895173618 (change=28.496392887582772 %)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,219 | INFO     | sum of square deviations: 1065480973070.3269
[2025-11-22 22:45:30] 2025-11-22 21:44:49,282 | INFO     | sum of deviations: 4395729519592.891
[2025-11-22 22:45:30] 2025-11-22 21:44:49,283 | INFO     | mean x: 1763801174.3353214
[2025-11-22 22:45:30] 2025-11-22 21:44:49,283 | INFO     | mean y: 2880830.3717693835
[2025-11-22 22:45:30] 2025-11-22 21:44:49,283 | INFO     | intersect: -7273826201.1733465
[2025-11-22 22:45:30] 2025-11-22 21:44:49,285 | INFO     | chi2: 4.126810507132099
[2025-11-22 22:45:30] 2025-11-22 21:44:49,285 | INFO     | current chi2=4.126810507132099 (change=46.03169506828252 %)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,287 | INFO     | sum of square deviations: 1054925371106.3824
[2025-11-22 22:45:30] 2025-11-22 21:44:49,346 | INFO     | sum of deviations: 4656211949370.708
[2025-11-22 22:45:30] 2025-11-22 21:44:49,347 | INFO     | mean x: 1763801021.8397605
[2025-11-22 22:45:30] 2025-11-22 21:44:49,347 | INFO     | mean y: 2884593.546542553
[2025-11-22 22:45:30] 2025-11-22 21:44:49,347 | INFO     | intersect: -7782150840.371718
[2025-11-22 22:45:30] 2025-11-22 21:44:49,349 | INFO     | chi2: 3.192479394722043
[2025-11-22 22:45:30] 2025-11-22 21:44:49,349 | INFO     | current chi2=3.192479394722043 (change=22.640514043358955 %)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,349 | INFO     | right removable region: 1503
[2025-11-22 22:45:30] 2025-11-22 21:44:49,352 | INFO     | sum of square deviations: 1076105533246.7124
[2025-11-22 22:45:30] 2025-11-22 21:44:49,413 | INFO     | sum of deviations: 2880677319225.3647
[2025-11-22 22:45:30] 2025-11-22 21:44:49,414 | INFO     | mean x: 1763801631.8309114
[2025-11-22 22:45:30] 2025-11-22 21:44:49,414 | INFO     | mean y: 2872792.509247028
[2025-11-22 22:45:30] 2025-11-22 21:44:49,414 | INFO     | intersect: -4718730432.685875
[2025-11-22 22:45:30] 2025-11-22 21:44:49,416 | INFO     | chi2: 8.110192934300088
[2025-11-22 22:45:30] 2025-11-22 21:44:49,416 | INFO     | current chi2=8.110192934300088 (change=24.16260844441283 %)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,416 | INFO     | left removable region: 10
[2025-11-22 22:45:30] 2025-11-22 21:44:49,419 | INFO     | sum of square deviations: 1031946867208.2784
[2025-11-22 22:45:30] 2025-11-22 21:44:49,491 | INFO     | sum of deviations: 4098568942665.503
[2025-11-22 22:45:30] 2025-11-22 21:44:49,492 | INFO     | mean x: 1763801296.3469524
[2025-11-22 22:45:30] 2025-11-22 21:44:49,492 | INFO     | mean y: 2893514.516409913
[2025-11-22 22:45:30] 2025-11-22 21:44:49,492 | INFO     | intersect: -7002371430.758846
[2025-11-22 22:45:30] 2025-11-22 21:44:49,494 | INFO     | chi2: 0.4503689210400917
[2025-11-22 22:45:30] 2025-11-22 21:44:49,494 | INFO     | current memory leak: 3.97 B/s (using 1493 data points, chi2=0.45)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,496 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | ..............................
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . Timing measurements:
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . get job = 0 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . initial setup = 4 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . payload setup = 102 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . stage-in = 0 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . payload execution = 92683 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . stage-out = 4 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,497 | INFO     | . log creation = 1 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,498 | INFO     | ..............................
[2025-11-22 22:45:30] 2025-11-22 21:44:49,617 | INFO     | 
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | job summary report
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | --------------------------------------------------
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | PanDA job id: 6891589336
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | task id: 47493068
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | errors: (none)
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | pilot state: finished 
[2025-11-22 22:45:30] 2025-11-22 21:44:49,618 | INFO     | transexitcode: 0
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | exeerrorcode: 0
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | exeerrordiag: 
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | exitcode: 0
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | exitmsg: OK
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | cpuconsumptiontime: 341146 s
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | nevents: 1000
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | neventsw: 0
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | pid: 25995
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | pgrp: 25995
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | corecount: 8
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | event service: False
[2025-11-22 22:45:30] 2025-11-22 21:44:49,619 | INFO     | sizes: {0: 2298569, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 55: 2299092, 56: 2299382, 66: 2299410, 92790: 2364032, 92791: 23643
[2025-11-22 22:45:30] 2025-11-22 21:44:49,620 | INFO     | --------------------------------------------------
[2025-11-22 22:45:30] 2025-11-22 21:44:49,620 | INFO     | 
[2025-11-22 22:45:30] 2025-11-22 21:44:49,620 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-22 22:45:30] 2025-11-22 21:44:49,926 | INFO     | time since job start (93013s) is within the limit (172800.0s)
[2025-11-22 22:45:30] 2025-11-22 21:44:50,054 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | job 6891589336 has completed (purged errors)
[2025-11-22 22:45:30] 2025-11-22 21:44:50,056 | INFO     | overall cleanup function is called
[2025-11-22 22:45:30] 2025-11-22 21:44:51,084 | INFO     | --- collectZombieJob: --- 10, [25995]
[2025-11-22 22:45:30] 2025-11-22 21:44:51,085 | INFO     | zombie collector waiting for pid 25995
[2025-11-22 22:45:30] 2025-11-22 21:44:51,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:45:30] 2025-11-22 21:44:51,085 | INFO     | collected zombie processes
[2025-11-22 22:45:30] 2025-11-22 21:44:51,085 | INFO     | will attempt to kill all subprocesses of pid=25995
[2025-11-22 22:45:30] 2025-11-22 21:44:51,230 | INFO     | process IDs to be killed: [25995] (in reverse order)
[2025-11-22 22:45:30] 2025-11-22 21:44:52,018 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:45:30] 2025-11-22 21:44:52,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:45:30] 2025-11-22 21:44:52,022 | INFO     | did not find any defunct processes belonging to 25995
[2025-11-22 22:45:30] 2025-11-22 21:44:52,025 | INFO     | did not find any defunct processes belonging to 25995
[2025-11-22 22:45:30] 2025-11-22 21:44:52,044 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:45:30] 2025-11-22 21:44:52,044 | INFO     | ready for new job
[2025-11-22 22:45:30] 2025-11-22 21:44:52,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:45:30] 2025-11-22 21:44:52,052 | INFO     | ***************************************
[2025-11-22 22:45:30] 2025-11-22 21:44:52,052 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:45:30] 2025-11-22 21:44:52,052 | INFO     | ***************************************
[2025-11-22 22:45:30] 2025-11-22 21:44:52,052 | INFO     | 
[2025-11-22 22:45:30] 2025-11-22 21:44:52,053 | INFO     | pilot is running in a VM
[2025-11-22 22:45:30] 2025-11-22 21:44:52,053 | INFO     | architecture information:
[2025-11-22 22:45:30] 2025-11-22 21:44:52,060 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:45:30] 2025-11-22 21:44:52,142 | INFO     | cat /etc/os-release:
[2025-11-22 22:45:30] NAME="CentOS Linux"
[2025-11-22 22:45:30] VERSION="7 (Core)"
[2025-11-22 22:45:30] ID="centos"
[2025-11-22 22:45:30] ID_LIKE="rhel fedora"
[2025-11-22 22:45:30] VERSION_ID="7"
[2025-11-22 22:45:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:45:30] ANSI_COLOR="0;31"
[2025-11-22 22:45:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:45:30] HOME_URL="https://www.centos.org/"
[2025-11-22 22:45:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:45:30] 
[2025-11-22 22:45:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:45:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:45:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:45:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:45:30] 
[2025-11-22 22:45:30] 2025-11-22 21:44:52,143 | INFO     | ***************************************
[2025-11-22 22:45:30] 2025-11-22 21:44:52,647 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-22 22:45:30] 2025-11-22 21:44:52,801 | INFO     | sufficient remaining disk space (491035557888 B)
[2025-11-22 22:45:30] 2025-11-22 21:44:52,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:45:30] 2025-11-22 21:44:52,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:45:30] 2025-11-22 21:44:52,802 | INFO     | update_server=False
[2025-11-22 22:45:30] 2025-11-22 21:44:52,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:45:30] 2025-11-22 21:44:52,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:45:30] 2025-11-22 21:44:52,804 | INFO     | aborting loop
[2025-11-22 22:45:30] 2025-11-22 21:44:52,831 | INFO     | all data control threads have been joined
[2025-11-22 22:45:30] 2025-11-22 21:44:53,392 | INFO     | all payload control threads have been joined
[2025-11-22 22:45:30] 2025-11-22 21:44:53,398 | INFO     | all job control threads have been joined
[2025-11-22 22:45:30] 2025-11-22 21:44:53,809 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:53,809 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:53,838 | INFO     | [data] control thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:53,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:45:30] 2025-11-22 21:44:54,126 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:45:30] 2025-11-22 21:44:54,176 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,376 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,399 | INFO     | [payload] control thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,405 | INFO     | [job] control thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,619 | INFO     | [job] validate thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,620 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:54,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:45:30] 2025-11-22 21:44:55,081 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:55,178 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:55,637 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:55,880 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:44:58,149 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:45:30] 2025-11-22 21:45:18,272 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:45:30] 2025-11-22 21:45:20,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787920754496)>', '<ExcThread(monitor, started 139787352663808)>']
[2025-11-22 22:45:30] 2025-11-22 21:45:23,127 | INFO     | PID=19067 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:45:30] 2025-11-22 21:45:23,127 | INFO     | .. there are 9 such processes running
[2025-11-22 22:45:30] 2025-11-22 21:45:23,129 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:45:30] 2025-11-22 21:45:23,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:45:30] 2025-11-22 21:45:23,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:45:30] 2025-11-22 21:45:23,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:45:30] 2025-11-22 21:45:23,129 | INFO     | [monitor] control thread has ended
[2025-11-22 22:45:30] 2025-11-22 21:45:25,152 | INFO     | all workflow threads have been joined
[2025-11-22 22:45:30] 2025-11-22 21:45:25,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:45:30] 2025-11-22 21:45:25,153 | INFO     | traces error code: 0
[2025-11-22 22:45:30] 2025-11-22 21:45:25,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:45:30] 2025-11-22 21:45:25,573 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:45:30] 2025-11-22 21:45:25,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:45:30] 2025-11-22 21:45:25,707 [wrapper] pilotpid: 19067
[2025-11-22 22:45:30] 2025-11-22 21:45:25,766 [wrapper] Pilot exit status: 0
[2025-11-22 22:45:30] 2025-11-22 21:45:26,085 [wrapper] pandaids: 6891589336
[2025-11-22 22:45:30] 2025-11-22 21:45:27,105 [wrapper] cleanup supervisor_pilot  4973 19068
[2025-11-22 22:45:30] 2025-11-22 21:45:27,146 [wrapper] Test setup, not cleaning
[2025-11-22 22:45:30] 2025-11-22 21:45:27,194 [wrapper] apfmon messages muted
[2025-11-22 22:45:30] 2025-11-22 21:45:27,234 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:45:30] 2025-11-22 21:45:27,283 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:45:30]  *** Error codes and diagnostics ***
[2025-11-22 22:45:30]     "exeErrorCode": 0,
[2025-11-22 22:45:30]     "exeErrorDiag": "",
[2025-11-22 22:45:30]     "pilotErrorCode": 0,
[2025-11-22 22:45:30]     "pilotErrorDiag": "",
[2025-11-22 22:45:30]  *** Listing of results directory ***
[2025-11-22 22:45:30] total 1338508
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:46 pilot3.tar.gz
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:49 queuedata.json
[2025-11-22 22:45:30] -rwx------. 1 boinc boinc     36292 Nov 18 18:50 runpilot2-wrapper.sh
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc       100 Nov 21 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:45:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 20:52 run_atlas
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc       105 Nov 21 20:52 job.xml
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc      6391 Nov 21 20:52 init_data.xml
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc 409837616 Nov 21 20:52 EVNT.47493065._000532.pool.root.1
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:52 start_atlas.sh
[2025-11-22 22:45:30] drwxrwx--x. 2 boinc boinc        68 Nov 21 20:52 shared
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc    590098 Nov 21 20:52 input.tar.gz
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc         0 Nov 21 20:52 boinc_lockfile
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc      2773 Nov 21 20:52 pandaJob.out
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc    989798 Nov 21 20:54 agis_schedconf.cvmfs.json
[2025-11-22 22:45:30] drwx------. 5 boinc boinc      4096 Nov 21 20:54 pilot3
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc       533 Nov 22 22:17 boinc_task_state.xml
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc 926998748 Nov 22 22:42 HITS.47493068._005318.pool.root.1
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc      1030 Nov 22 22:43 memory_monitor_summary.json
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc   1526164 Nov 22 22:43 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc   2571193 Nov 22 22:43 log.47493068._005318.job.log.tgz.1
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc      8623 Nov 22 22:44 heartbeat.json
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc        29 Nov 22 22:45 wrapper_checkpoint.txt
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc      8192 Nov 22 22:45 boinc_mmap_file
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc        95 Nov 22 22:45 pilot_heartbeat.json
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc      4884 Nov 22 22:45 pilotlog.txt
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc  12368109 Nov 22 22:45 log.47493068._005318.job.log.1
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc       353 Nov 22 22:45 output.list
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc       620 Nov 22 22:45 runtime_log
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc  14960640 Nov 22 22:45 result.tar.gz
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc       662 Nov 22 22:45 wrgKDmR1ef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI8FKDmr7kbem.diag
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc      8703 Nov 22 22:45 runtime_log.err
[2025-11-22 22:45:30] -rw-r--r--. 1 boinc boinc     21012 Nov 22 22:45 stderr.txt
[2025-11-22 22:45:30] HITS file was successfully produced:
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc 926998748 Nov 22 22:42 shared/HITS.pool.root.1
[2025-11-22 22:45:30]  *** Contents of shared directory: ***
[2025-11-22 22:45:30] total 1320720
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc 409837616 Nov 21 20:52 ATLAS.root_0
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:52 start_atlas.sh
[2025-11-22 22:45:30] -rw-r--r--. 2 boinc boinc    590098 Nov 21 20:52 input.tar.gz
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc 926998748 Nov 22 22:42 HITS.pool.root.1
[2025-11-22 22:45:30] -rw-------. 1 boinc boinc  14960640 Nov 22 22:45 result.tar.gz
22:45:31 (15035): run_atlas exited; CPU time 341696.885442
22:45:31 (15035): called boinc_finish(0)

</stderr_txt>
]]>

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