Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:09:54 (21386): wrapper (7.7.26015): starting
19:09:54 (21386): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:09:54] Arguments: --nthreads 8
[2025-11-20 19:09:54] Threads: 8
[2025-11-20 19:09:54] Checking for CVMFS
[2025-11-20 19:09:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:09:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:09:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:09:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:09:57] 2.11.2.0 20606 73186 98580 153088 1 85 20471545 25165824 4250 130560 3 22730397 99.903 10904733 2005 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:09:57] CVMFS is ok
[2025-11-20 19:09:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:09:57] Checking for apptainer binary...
[2025-11-20 19:09:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:09:57] Running /usr/bin/apptainer --version
[2025-11-20 19:09:57] apptainer version 1.3.2-1.el7
[2025-11-20 19:09:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:10:13] cg-vwn476.simple-grid.lan
[2025-11-20 19:10:13] apptainer works
[2025-11-20 19:10:13] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:10:13] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:10:13] Starting ATLAS job with PandaID=6891591847
[2025-11-20 19:10:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 18:31:32]  *** The last 200 lines of the pilot log: ***
[2025-11-21 18:31:32] 2025-11-21 17:30:11,135 | INFO     | monitor loop #5696: job 0:6891591847 is in state 'finished'
[2025-11-21 18:31:32] 2025-11-21 17:30:11,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:31:32] 2025-11-21 17:30:11,219 | INFO     | PID=25187 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:31:32] 2025-11-21 17:30:11,219 | INFO     | .. there are 9 such processes running
[2025-11-21 18:31:32] 2025-11-21 17:30:12,220 | INFO     | time since job start (83776s) is within the limit (172800.0s)
[2025-11-21 18:31:32] 2025-11-21 17:30:13,640 | INFO     | monitor loop #5697: job 0:6891591847 is in state 'finished'
[2025-11-21 18:31:32] 2025-11-21 17:30:13,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:31:32] 2025-11-21 17:30:14,227 | INFO     | time since job start (83778s) is within the limit (172800.0s)
[2025-11-21 18:31:32] 2025-11-21 17:30:16,145 | INFO     | monitor loop #5698: job 0:6891591847 is in state 'finished'
[2025-11-21 18:31:32] 2025-11-21 17:30:16,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:31:32] 2025-11-21 17:30:16,235 | INFO     | time since job start (83780s) is within the limit (172800.0s)
[2025-11-21 18:31:32] 2025-11-21 17:30:18,242 | INFO     | time since job start (83782s) is within the limit (172800.0s)
[2025-11-21 18:31:32] 2025-11-21 17:30:18,243 | INFO     | 83787s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-21 18:31:32] 2025-11-21 17:30:18,655 | INFO     | monitor loop #5699: job 0:6891591847 is in state 'finished'
[2025-11-21 18:31:32] 2025-11-21 17:30:18,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,254 | INFO     | time since job start (83784s) is within the limit (172800.0s)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,598 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 18:31:32] 2025-11-21 17:30:20,599 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-21 18:31:32] 2025-11-21 17:30:20,600 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891591847/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,601 | INFO     | extracted standard info from prmon json
[2025-11-21 18:31:32] 2025-11-21 17:30:20,601 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 18:31:32] 2025-11-21 17:30:20,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 18:31:32] 2025-11-21 17:30:20,625 | INFO     | fitting pss+swap vs Time
[2025-11-21 18:31:32] 2025-11-21 17:30:20,628 | INFO     | sum of square deviations: 785171647032.4434
[2025-11-21 18:31:32] 2025-11-21 17:30:20,677 | INFO     | sum of deviations: 2125010146071.94
[2025-11-21 18:31:32] 2025-11-21 17:30:20,677 | INFO     | mean x: 1763704519.2633896
[2025-11-21 18:31:32] 2025-11-21 17:30:20,677 | INFO     | mean y: 2862839.688187821
[2025-11-21 18:31:32] 2025-11-21 17:30:20,677 | INFO     | intersect: -4770475591.816297
[2025-11-21 18:31:32] 2025-11-21 17:30:20,679 | INFO     | chi2: 26.880384502606123
[2025-11-21 18:31:32] 2025-11-21 17:30:20,681 | INFO     | sum of square deviations: 776562885231.9333
[2025-11-21 18:31:32] 2025-11-21 17:30:20,735 | INFO     | sum of deviations: 2577597262458.9287
[2025-11-21 18:31:32] 2025-11-21 17:30:20,735 | INFO     | mean x: 1763704366.7680411
[2025-11-21 18:31:32] 2025-11-21 17:30:20,735 | INFO     | mean y: 2870856.002945508
[2025-11-21 18:31:32] 2025-11-21 17:30:20,735 | INFO     | intersect: -5851284208.60639
[2025-11-21 18:31:32] 2025-11-21 17:30:20,737 | INFO     | chi2: 23.731755369273802
[2025-11-21 18:31:32] 2025-11-21 17:30:20,737 | INFO     | current chi2=23.731755369273802 (change=11.713482495114805 %)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,737 | INFO     | right removable region: 1357
[2025-11-21 18:31:32] 2025-11-21 17:30:20,739 | INFO     | sum of square deviations: 776561834811.9333
[2025-11-21 18:31:32] 2025-11-21 17:30:20,784 | INFO     | sum of deviations: 1532287002528.021
[2025-11-21 18:31:32] 2025-11-21 17:30:20,784 | INFO     | mean x: 1763704671.7680411
[2025-11-21 18:31:32] 2025-11-21 17:30:20,784 | INFO     | mean y: 2873338.4889543448
[2025-11-21 18:31:32] 2025-11-21 17:30:20,784 | INFO     | intersect: -3477212372.2678804
[2025-11-21 18:31:32] 2025-11-21 17:30:20,786 | INFO     | chi2: 21.82193983262601
[2025-11-21 18:31:32] 2025-11-21 17:30:20,786 | INFO     | current chi2=21.82193983262601 (change=18.818349378483344 %)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,786 | INFO     | left removable region: 10
[2025-11-21 18:31:32] 2025-11-21 17:30:20,788 | INFO     | sum of square deviations: 757843518174.6003
[2025-11-21 18:31:32] 2025-11-21 17:30:20,830 | INFO     | sum of deviations: 1547406327515.8716
[2025-11-21 18:31:32] 2025-11-21 17:30:20,831 | INFO     | mean x: 1763704641.2783964
[2025-11-21 18:31:32] 2025-11-21 17:30:20,831 | INFO     | mean y: 2892826.016332591
[2025-11-21 18:31:32] 2025-11-21 17:30:20,831 | INFO     | intersect: -3598335734.1447177
[2025-11-21 18:31:32] 2025-11-21 17:30:20,832 | INFO     | chi2: 13.85506196071116
[2025-11-21 18:31:32] 2025-11-21 17:30:20,833 | INFO     | current memory leak: 2.04 B/s (using 1347 data points, chi2=13.86)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,835 | INFO     | could have reported an average CPU frequency of 2249 MHz (46 samples)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,835 | INFO     | ..............................
[2025-11-21 18:31:32] 2025-11-21 17:30:20,835 | INFO     | . Timing measurements:
[2025-11-21 18:31:32] 2025-11-21 17:30:20,835 | INFO     | . get job = 0 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . initial setup = 6 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . payload setup = 168 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . stage-in = 0 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . payload execution = 83298 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . stage-out = 9 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | . log creation = 2 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,836 | INFO     | ..............................
[2025-11-21 18:31:32] 2025-11-21 17:30:20,950 | INFO     | 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | job summary report
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | --------------------------------------------------
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | PanDA job id: 6891591847
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | task id: 47493068
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | errors: (none)
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | pilot state: finished 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | transexitcode: 0
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | exeerrorcode: 0
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | exeerrordiag: 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | exitcode: 0
[2025-11-21 18:31:32] 2025-11-21 17:30:20,951 | INFO     | exitmsg: OK
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | cpuconsumptiontime: 309449 s
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | nevents: 1000
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | neventsw: 0
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | pid: 31792
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | pgrp: 31792
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | corecount: 8
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | event service: False
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 33: 2298881, 44: 2298937, 55: 2299093, 66: 2299121, 77: 2299149, 87: 2299205, 98: 2299233, 103: 2299803, 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | --------------------------------------------------
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | 
[2025-11-21 18:31:32] 2025-11-21 17:30:20,952 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-21 18:31:32] 2025-11-21 17:30:21,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,528 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 18:31:32] 2025-11-21 17:30:21,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 18:31:32] 2025-11-21 17:30:21,529 | INFO     | job 6891591847 has completed (purged errors)
[2025-11-21 18:31:32] 2025-11-21 17:30:21,529 | INFO     | overall cleanup function is called
[2025-11-21 18:31:32] 2025-11-21 17:30:22,547 | INFO     | --- collectZombieJob: --- 10, [31792]
[2025-11-21 18:31:32] 2025-11-21 17:30:22,548 | INFO     | zombie collector waiting for pid 31792
[2025-11-21 18:31:32] 2025-11-21 17:30:22,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 18:31:32] 2025-11-21 17:30:22,548 | INFO     | collected zombie processes
[2025-11-21 18:31:32] 2025-11-21 17:30:22,548 | INFO     | will attempt to kill all subprocesses of pid=31792
[2025-11-21 18:31:32] 2025-11-21 17:30:22,654 | INFO     | process IDs to be killed: [31792] (in reverse order)
[2025-11-21 18:31:32] 2025-11-21 17:30:23,455 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 18:31:32] 2025-11-21 17:30:23,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 18:31:32] 2025-11-21 17:30:23,459 | INFO     | did not find any defunct processes belonging to 31792
[2025-11-21 18:31:32] 2025-11-21 17:30:23,466 | INFO     | did not find any defunct processes belonging to 31792
[2025-11-21 18:31:32] 2025-11-21 17:30:23,511 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 18:31:32] 2025-11-21 17:30:23,512 | INFO     | ready for new job
[2025-11-21 18:31:32] 2025-11-21 17:30:23,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 18:31:32] 2025-11-21 17:30:23,518 | INFO     | ***************************************
[2025-11-21 18:31:32] 2025-11-21 17:30:23,519 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 18:31:32] 2025-11-21 17:30:23,519 | INFO     | ***************************************
[2025-11-21 18:31:32] 2025-11-21 17:30:23,519 | INFO     | 
[2025-11-21 18:31:32] 2025-11-21 17:30:23,520 | INFO     | pilot is running in a VM
[2025-11-21 18:31:32] 2025-11-21 17:30:23,520 | INFO     | architecture information:
[2025-11-21 18:31:32] 2025-11-21 17:30:23,529 | INFO     | executing command: cat /etc/os-release
[2025-11-21 18:31:32] 2025-11-21 17:30:23,777 | INFO     | cat /etc/os-release:
[2025-11-21 18:31:32] NAME="CentOS Linux"
[2025-11-21 18:31:32] VERSION="7 (Core)"
[2025-11-21 18:31:32] ID="centos"
[2025-11-21 18:31:32] ID_LIKE="rhel fedora"
[2025-11-21 18:31:32] VERSION_ID="7"
[2025-11-21 18:31:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 18:31:32] ANSI_COLOR="0;31"
[2025-11-21 18:31:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 18:31:32] HOME_URL="https://www.centos.org/"
[2025-11-21 18:31:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 18:31:32] 
[2025-11-21 18:31:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 18:31:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 18:31:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 18:31:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 18:31:32] 
[2025-11-21 18:31:32] 2025-11-21 17:30:23,778 | INFO     | ***************************************
[2025-11-21 18:31:32] 2025-11-21 17:30:24,281 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-21 18:31:32] 2025-11-21 17:30:24,441 | INFO     | sufficient remaining disk space (494889074688 B)
[2025-11-21 18:31:32] 2025-11-21 17:30:24,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 18:31:32] 2025-11-21 17:30:24,442 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 18:31:32] 2025-11-21 17:30:24,442 | INFO     | update_server=False
[2025-11-21 18:31:32] 2025-11-21 17:30:24,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 18:31:32] 2025-11-21 17:30:24,647 | INFO     | all data control threads have been joined
[2025-11-21 18:31:32] 2025-11-21 17:30:24,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:31:32] 2025-11-21 17:30:24,684 | INFO     | aborting loop
[2025-11-21 18:31:32] 2025-11-21 17:30:25,026 | INFO     | all payload control threads have been joined
[2025-11-21 18:31:32] 2025-11-21 17:30:25,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 18:31:32] 2025-11-21 17:30:25,448 | INFO     | [job] retrieve thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,653 | INFO     | [data] control thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,689 | INFO     | [job] job monitor thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,753 | INFO     | [data] copytool_in thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,754 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,772 | INFO     | all job control threads have been joined
[2025-11-21 18:31:32] 2025-11-21 17:30:25,928 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:25,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 18:31:32] 2025-11-21 17:30:26,032 | INFO     | [payload] control thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,158 | INFO     | [job] validate thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,444 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,464 | INFO     | [payload] failed_post thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,779 | INFO     | [job] control thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,961 | INFO     | [payload] validate_post thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:26,970 | INFO     | [job] queue monitor thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:27,214 | INFO     | [data] copytool_out thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:27,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 18:31:32] 2025-11-21 17:30:31,786 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 18:31:32] 2025-11-21 17:30:53,446 | INFO     | PID=25187 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 18:31:32] 2025-11-21 17:30:53,447 | INFO     | .. there are 9 such processes running
[2025-11-21 18:31:32] 2025-11-21 17:30:53,448 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 18:31:32] 2025-11-21 17:30:53,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 18:31:32] 2025-11-21 17:30:53,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 18:31:32] 2025-11-21 17:31:22,446 | INFO     | [monitor] cgroup control has ended
[2025-11-21 18:31:32] 2025-11-21 17:31:23,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179888314176)>', '<ExcThread(monitor, started 140179436185344)>']
[2025-11-21 18:31:32] 2025-11-21 17:31:23,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 18:31:32] 2025-11-21 17:31:23,628 | INFO     | [monitor] control thread has ended
[2025-11-21 18:31:32] 2025-11-21 17:31:28,148 | INFO     | all workflow threads have been joined
[2025-11-21 18:31:32] 2025-11-21 17:31:28,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 18:31:32] 2025-11-21 17:31:28,149 | INFO     | traces error code: 0
[2025-11-21 18:31:32] 2025-11-21 17:31:28,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 18:31:32] 2025-11-21 17:31:28,589 [wrapper] ==== pilot stdout END ====
[2025-11-21 18:31:32] 2025-11-21 17:31:28,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 18:31:32] 2025-11-21 17:31:28,755 [wrapper] pilotpid: 25187
[2025-11-21 18:31:32] 2025-11-21 17:31:28,834 [wrapper] Pilot exit status: 0
[2025-11-21 18:31:32] 2025-11-21 17:31:29,104 [wrapper] pandaids: 6891591847
[2025-11-21 18:31:32] 2025-11-21 17:31:29,997 [wrapper] cleanup supervisor_pilot  5000 25188
[2025-11-21 18:31:32] 2025-11-21 17:31:30,066 [wrapper] Test setup, not cleaning
[2025-11-21 18:31:32] 2025-11-21 17:31:30,159 [wrapper] apfmon messages muted
[2025-11-21 18:31:32] 2025-11-21 17:31:30,218 [wrapper] ==== wrapper stdout END ====
[2025-11-21 18:31:32] 2025-11-21 17:31:30,304 [wrapper] ==== wrapper stderr END ====
[2025-11-21 18:31:32]  *** Error codes and diagnostics ***
[2025-11-21 18:31:32]     "exeErrorCode": 0,
[2025-11-21 18:31:32]     "exeErrorDiag": "",
[2025-11-21 18:31:32]     "pilotErrorCode": 0,
[2025-11-21 18:31:32]     "pilotErrorDiag": "",
[2025-11-21 18:31:32]  *** Listing of results directory ***
[2025-11-21 18:31:32] total 1329856
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-21 18:31:32] -rwx------. 1 boinc boinc     36292 Nov 18 19:12 runpilot2-wrapper.sh
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:12 queuedata.json
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 18:31:32] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:09 run_atlas
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:09 job.xml
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc 407585883 Nov 20 19:09 EVNT.47493065._000628.pool.root.1
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc    590096 Nov 20 19:09 input.tar.gz
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc      6392 Nov 20 19:09 init_data.xml
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:09 start_atlas.sh
[2025-11-21 18:31:32] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:09 shared
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:09 boinc_lockfile
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc      2773 Nov 20 19:10 pandaJob.out
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc    989440 Nov 20 19:13 agis_schedconf.cvmfs.json
[2025-11-21 18:31:32] drwx------. 5 boinc boinc      4096 Nov 20 19:13 pilot3
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc       533 Nov 21 18:04 boinc_task_state.xml
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc 922845609 Nov 21 18:27 HITS.47493068._005779.pool.root.1
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc      1033 Nov 21 18:28 memory_monitor_summary.json
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc   1526164 Nov 21 18:28 agis_ddmendpoints.agis.ALL.json
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc   2474444 Nov 21 18:28 log.47493068._005779.job.log.tgz.1
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc      7262 Nov 21 18:30 heartbeat.json
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc        95 Nov 21 18:30 pilot_heartbeat.json
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc      8192 Nov 21 18:31 boinc_mmap_file
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc        29 Nov 21 18:31 wrapper_checkpoint.txt
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc      4885 Nov 21 18:31 pilotlog.txt
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc  11243046 Nov 21 18:31 log.47493068._005779.job.log.1
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc       353 Nov 21 18:31 output.list
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc       620 Nov 21 18:31 runtime_log
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc  13731840 Nov 21 18:31 result.tar.gz
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc       662 Nov 21 18:31 RZSKDmINff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2eFKDmg3QwQo.diag
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc      8717 Nov 21 18:31 runtime_log.err
[2025-11-21 18:31:32] -rw-r--r--. 1 boinc boinc     21521 Nov 21 18:31 stderr.txt
[2025-11-21 18:31:32] HITS file was successfully produced:
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc 922845609 Nov 21 18:27 shared/HITS.pool.root.1
[2025-11-21 18:31:32]  *** Contents of shared directory: ***
[2025-11-21 18:31:32] total 1313264
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc 407585883 Nov 20 19:09 ATLAS.root_0
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc    590096 Nov 20 19:09 input.tar.gz
[2025-11-21 18:31:32] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:09 start_atlas.sh
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc 922845609 Nov 21 18:27 HITS.pool.root.1
[2025-11-21 18:31:32] -rw-------. 1 boinc boinc  13731840 Nov 21 18:31 result.tar.gz
18:31:34 (21386): run_atlas exited; CPU time 309847.277281
18:31:34 (21386): called boinc_finish(0)

</stderr_txt>
]]>

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