Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:50:23 (29765): wrapper (7.7.26015): starting
20:50:23 (29765): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:50:23] Arguments: --nthreads 8
[2025-11-20 20:50:23] Threads: 8
[2025-11-20 20:50:23] Checking for CVMFS
[2025-11-20 20:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:50:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:50:24] 2.11.2.0 6477 277025 143596 153088 3 193 15852389 25165824 4054 130560 13 127240093 99.871 75447556 2783 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:50:24] CVMFS is ok
[2025-11-20 20:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:50:24] Checking for apptainer binary...
[2025-11-20 20:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:50:24] Running /usr/bin/apptainer --version
[2025-11-20 20:50:24] apptainer version 1.3.2-1.el7
[2025-11-20 20:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:50:26] cg-vwn261.simple-grid.lan
[2025-11-20 20:50:26] apptainer works
[2025-11-20 20:50:26] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:50:26] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:50:26] Starting ATLAS job with PandaID=6891565103
[2025-11-20 20:50:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:24:53]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:24:53] 2025-11-21 20:23:51,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:24:53] 2025-11-21 20:23:51,976 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:24:53] 2025-11-21 20:23:51,978 | INFO     | sum of square deviations: 939469811963.5505
[2025-11-21 21:24:53] 2025-11-21 20:23:52,045 | INFO     | sum of deviations: 2721790214536.796
[2025-11-21 21:24:53] 2025-11-21 20:23:52,045 | INFO     | mean x: 1763712479.2093987
[2025-11-21 21:24:53] 2025-11-21 20:23:52,046 | INFO     | mean y: 2881215.8092605392
[2025-11-21 21:24:53] 2025-11-21 20:23:52,046 | INFO     | intersect: -5106868247.172762
[2025-11-21 21:24:53] 2025-11-21 20:23:52,048 | INFO     | chi2: 8.483097320364335
[2025-11-21 21:24:53] 2025-11-21 20:23:52,050 | INFO     | sum of square deviations: 929765131178.7135
[2025-11-21 21:24:53] 2025-11-21 20:23:52,104 | INFO     | sum of deviations: 3227617225635.9536
[2025-11-21 21:24:53] 2025-11-21 20:23:52,105 | INFO     | mean x: 1763712326.7135923
[2025-11-21 21:24:53] 2025-11-21 20:23:52,105 | INFO     | mean y: 2889164.3848821083
[2025-11-21 21:24:53] 2025-11-21 20:23:52,105 | INFO     | intersect: -6119719756.806275
[2025-11-21 21:24:53] 2025-11-21 20:23:52,107 | INFO     | chi2: 5.132477623901098
[2025-11-21 21:24:53] 2025-11-21 20:23:52,107 | INFO     | current chi2=5.132477623901098 (change=39.49759822299591 %)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,109 | INFO     | sum of square deviations: 920127521418.8226
[2025-11-21 21:24:53] 2025-11-21 20:23:52,166 | INFO     | sum of deviations: 3527217743605.837
[2025-11-21 21:24:53] 2025-11-21 20:23:52,167 | INFO     | mean x: 1763712174.217815
[2025-11-21 21:24:53] 2025-11-21 20:23:52,167 | INFO     | mean y: 2893901.4829505915
[2025-11-21 21:24:53] 2025-11-21 20:23:52,167 | INFO     | intersect: -6758122078.043478
[2025-11-21 21:24:53] 2025-11-21 20:23:52,169 | INFO     | chi2: 3.677231581958468
[2025-11-21 21:24:53] 2025-11-21 20:23:52,169 | INFO     | current chi2=3.677231581958468 (change=28.353675331496625 %)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,171 | INFO     | sum of square deviations: 910556487276.7083
[2025-11-21 21:24:53] 2025-11-21 20:23:52,224 | INFO     | sum of deviations: 3603318337340.21
[2025-11-21 21:24:53] 2025-11-21 20:23:52,224 | INFO     | mean x: 1763712021.7199721
[2025-11-21 21:24:53] 2025-11-21 20:23:52,224 | INFO     | mean y: 2895113.1501396648
[2025-11-21 21:24:53] 2025-11-21 20:23:52,224 | INFO     | intersect: -6976590463.475782
[2025-11-21 21:24:53] 2025-11-21 20:23:52,226 | INFO     | chi2: 3.529271403925935
[2025-11-21 21:24:53] 2025-11-21 20:23:52,226 | INFO     | current chi2=3.529271403925935 (change=4.023683978960348 %)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,226 | INFO     | right removable region: 1431
[2025-11-21 21:24:53] 2025-11-21 20:23:52,229 | INFO     | sum of square deviations: 929764063678.7137
[2025-11-21 21:24:53] 2025-11-21 20:23:52,285 | INFO     | sum of deviations: 2232969139913.2397
[2025-11-21 21:24:53] 2025-11-21 20:23:52,285 | INFO     | mean x: 1763712631.7135923
[2025-11-21 21:24:53] 2025-11-21 20:23:52,285 | INFO     | mean y: 2888893.957004161
[2025-11-21 21:24:53] 2025-11-21 20:23:52,286 | INFO     | intersect: -4232933969.2210336
[2025-11-21 21:24:53] 2025-11-21 20:23:52,287 | INFO     | chi2: 5.515006462667465
[2025-11-21 21:24:53] 2025-11-21 20:23:52,287 | INFO     | current chi2=5.515006462667465 (change=34.988291959962986 %)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,289 | INFO     | sum of square deviations: 920125738028.5554
[2025-11-21 21:24:53] 2025-11-21 20:23:52,345 | INFO     | sum of deviations: 2081543717007.6882
[2025-11-21 21:24:53] 2025-11-21 20:23:52,346 | INFO     | mean x: 1763712784.2150314
[2025-11-21 21:24:53] 2025-11-21 20:23:52,346 | INFO     | mean y: 2891287.7550452333
[2025-11-21 21:24:53] 2025-11-21 20:23:52,346 | INFO     | intersect: -3987047383.51273
[2025-11-21 21:24:53] 2025-11-21 20:23:52,348 | INFO     | chi2: 5.2020891398379625
[2025-11-21 21:24:53] 2025-11-21 20:23:52,348 | INFO     | current chi2=5.2020891398379625 (change=5.673924862059952 %)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,348 | INFO     | left removable region: 20
[2025-11-21 21:24:53] 2025-11-21 20:23:52,350 | INFO     | sum of square deviations: 871081086405.7812
[2025-11-21 21:24:53] 2025-11-21 20:23:52,412 | INFO     | sum of deviations: 2809628900726.7085
[2025-11-21 21:24:53] 2025-11-21 20:23:52,412 | INFO     | mean x: 1763712601.2246633
[2025-11-21 21:24:53] 2025-11-21 20:23:52,412 | INFO     | mean y: 2908011.2154500354
[2025-11-21 21:24:53] 2025-11-21 20:23:52,413 | INFO     | intersect: -5685859629.720676
[2025-11-21 21:24:53] 2025-11-21 20:23:52,414 | INFO     | chi2: 0.14569187227430186
[2025-11-21 21:24:53] 2025-11-21 20:23:52,414 | INFO     | current memory leak: 3.23 B/s (using 1411 data points, chi2=0.15)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,417 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,417 | INFO     | ..............................
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . Timing measurements:
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . get job = 0 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . initial setup = 3 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . payload setup = 21 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . stage-in = 0 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . payload execution = 88282 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . stage-out = 4 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | . log creation = 1 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,418 | INFO     | ..............................
[2025-11-21 21:24:53] 2025-11-21 20:23:52,803 | INFO     | 
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | job summary report
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | --------------------------------------------------
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | PanDA job id: 6891565103
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | task id: 47493068
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | errors: (none)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | pilot state: finished 
[2025-11-21 21:24:53] 2025-11-21 20:23:52,804 | INFO     | transexitcode: 0
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | exeerrorcode: 0
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | exeerrordiag: 
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | exitcode: 0
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | exitmsg: OK
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | cpuconsumptiontime: 334320 s
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | nevents: 1000
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | neventsw: 0
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | pid: 13774
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | pgrp: 13774
[2025-11-21 21:24:53] 2025-11-21 20:23:52,805 | INFO     | corecount: 8
[2025-11-21 21:24:53] 2025-11-21 20:23:52,806 | INFO     | event service: False
[2025-11-21 21:24:53] 2025-11-21 20:23:52,806 | INFO     | sizes: {0: 2298625, 1: 2298824, 12: 2298824, 14: 2299114, 23: 2299142, 88307: 2362239, 88313: 2371289, 88328: 2371479}
[2025-11-21 21:24:53] 2025-11-21 20:23:52,806 | INFO     | --------------------------------------------------
[2025-11-21 21:24:53] 2025-11-21 20:23:52,806 | INFO     | 
[2025-11-21 21:24:53] 2025-11-21 20:23:52,806 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-21 21:24:53] 2025-11-21 20:23:52,861 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,863 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:24:53] 2025-11-21 20:23:52,864 | INFO     | job 6891565103 has completed (purged errors)
[2025-11-21 21:24:53] 2025-11-21 20:23:52,864 | INFO     | overall cleanup function is called
[2025-11-21 21:24:53] 2025-11-21 20:23:53,884 | INFO     | --- collectZombieJob: --- 10, [13774]
[2025-11-21 21:24:53] 2025-11-21 20:23:53,885 | INFO     | zombie collector waiting for pid 13774
[2025-11-21 21:24:53] 2025-11-21 20:23:53,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:24:53] 2025-11-21 20:23:53,885 | INFO     | collected zombie processes
[2025-11-21 21:24:53] 2025-11-21 20:23:53,885 | INFO     | will attempt to kill all subprocesses of pid=13774
[2025-11-21 21:24:53] 2025-11-21 20:23:53,985 | INFO     | process IDs to be killed: [13774] (in reverse order)
[2025-11-21 21:24:53] 2025-11-21 20:23:54,088 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:24:53] 2025-11-21 20:23:54,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:24:53] 2025-11-21 20:23:54,092 | INFO     | did not find any defunct processes belonging to 13774
[2025-11-21 21:24:53] 2025-11-21 20:23:54,097 | INFO     | did not find any defunct processes belonging to 13774
[2025-11-21 21:24:53] 2025-11-21 20:23:54,098 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:24:53] 2025-11-21 20:23:54,099 | INFO     | ready for new job
[2025-11-21 21:24:53] 2025-11-21 20:23:54,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:24:53] 2025-11-21 20:23:54,106 | INFO     | ***************************************
[2025-11-21 21:24:53] 2025-11-21 20:23:54,107 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:24:53] 2025-11-21 20:23:54,107 | INFO     | ***************************************
[2025-11-21 21:24:53] 2025-11-21 20:23:54,107 | INFO     | 
[2025-11-21 21:24:53] 2025-11-21 20:23:54,107 | INFO     | pilot is running in a VM
[2025-11-21 21:24:53] 2025-11-21 20:23:54,107 | INFO     | architecture information:
[2025-11-21 21:24:53] 2025-11-21 20:23:54,108 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:24:53] 2025-11-21 20:23:54,128 | INFO     | cat /etc/os-release:
[2025-11-21 21:24:53] NAME="CentOS Linux"
[2025-11-21 21:24:53] VERSION="7 (Core)"
[2025-11-21 21:24:53] ID="centos"
[2025-11-21 21:24:53] ID_LIKE="rhel fedora"
[2025-11-21 21:24:53] VERSION_ID="7"
[2025-11-21 21:24:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:24:53] ANSI_COLOR="0;31"
[2025-11-21 21:24:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:24:53] HOME_URL="https://www.centos.org/"
[2025-11-21 21:24:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:24:53] 
[2025-11-21 21:24:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:24:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:24:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:24:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:24:53] 
[2025-11-21 21:24:53] 2025-11-21 20:23:54,128 | INFO     | ***************************************
[2025-11-21 21:24:53] 2025-11-21 20:23:54,631 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-21 21:24:53] 2025-11-21 20:23:54,698 | INFO     | sufficient remaining disk space (494992883712 B)
[2025-11-21 21:24:53] 2025-11-21 20:23:54,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:24:53] 2025-11-21 20:23:54,699 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:24:53] 2025-11-21 20:23:54,699 | INFO     | update_server=False
[2025-11-21 21:24:53] 2025-11-21 20:23:54,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:24:53] 2025-11-21 20:23:54,971 | INFO     | all data control threads have been joined
[2025-11-21 21:24:53] 2025-11-21 20:23:55,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:24:53] 2025-11-21 20:23:55,281 | INFO     | aborting loop
[2025-11-21 21:24:53] 2025-11-21 20:23:55,615 | INFO     | all job control threads have been joined
[2025-11-21 21:24:53] 2025-11-21 20:23:55,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:24:53] 2025-11-21 20:23:55,706 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:55,913 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:55,977 | INFO     | [data] control thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,096 | INFO     | all payload control threads have been joined
[2025-11-21 21:24:53] 2025-11-21 20:23:56,254 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,286 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,335 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,544 | INFO     | [job] validate thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,578 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,621 | INFO     | [job] control thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:56,645 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:57,099 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:57,102 | INFO     | [payload] control thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:57,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:24:53] 2025-11-21 20:23:57,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:24:53] 2025-11-21 20:23:57,666 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:23:58,566 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:24:01,296 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:24:53] 2025-11-21 20:24:24,479 | INFO     | PID=3462 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 21:24:53] 2025-11-21 20:24:24,479 | INFO     | .. there are 9 such processes running
[2025-11-21 21:24:53] 2025-11-21 20:24:24,480 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:24:53] 2025-11-21 20:24:24,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:24:53] 2025-11-21 20:24:24,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:24:53] 2025-11-21 20:24:43,596 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:24:53] 2025-11-21 20:24:44,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267923998528)>', '<ExcThread(monitor, started 140267474622208)>']
[2025-11-21 21:24:53] 2025-11-21 20:24:45,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:24:53] 2025-11-21 20:24:45,601 | INFO     | [monitor] control thread has ended
[2025-11-21 21:24:53] 2025-11-21 20:24:49,721 | INFO     | all workflow threads have been joined
[2025-11-21 21:24:53] 2025-11-21 20:24:49,722 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:24:53] 2025-11-21 20:24:49,722 | INFO     | traces error code: 0
[2025-11-21 21:24:53] 2025-11-21 20:24:49,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:24:53] 2025-11-21 20:24:50,062 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:24:53] 2025-11-21 20:24:50,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:24:53] 2025-11-21 20:24:50,145 [wrapper] pilotpid: 3462
[2025-11-21 21:24:53] 2025-11-21 20:24:50,219 [wrapper] Pilot exit status: 0
[2025-11-21 21:24:53] 2025-11-21 20:24:50,602 [wrapper] pandaids: 6891565103
[2025-11-21 21:24:53] 2025-11-21 20:24:51,570 [wrapper] cleanup supervisor_pilot 24619 3463
[2025-11-21 21:24:53] 2025-11-21 20:24:51,661 [wrapper] Test setup, not cleaning
[2025-11-21 21:24:53] 2025-11-21 20:24:51,725 [wrapper] apfmon messages muted
[2025-11-21 21:24:53] 2025-11-21 20:24:51,807 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:24:53] 2025-11-21 20:24:51,943 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:24:53]  *** Error codes and diagnostics ***
[2025-11-21 21:24:53]     "exeErrorCode": 0,
[2025-11-21 21:24:53]     "exeErrorDiag": "",
[2025-11-21 21:24:53]     "pilotErrorCode": 0,
[2025-11-21 21:24:53]     "pilotErrorDiag": "",
[2025-11-21 21:24:53]  *** Listing of results directory ***
[2025-11-21 21:24:53] total 1317824
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-21 21:24:53] -rwx------. 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:24:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:50 run_atlas
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:50 job.xml
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc 409395397 Nov 20 20:50 EVNT.47493065._000132.pool.root.1
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc      6390 Nov 20 20:50 init_data.xml
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:50 start_atlas.sh
[2025-11-21 21:24:53] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:50 shared
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc    590099 Nov 20 20:50 input.tar.gz
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:50 boinc_lockfile
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc      2773 Nov 20 20:50 pandaJob.out
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc    989440 Nov 20 20:51 agis_schedconf.cvmfs.json
[2025-11-21 21:24:53] drwx------. 5 boinc boinc      4096 Nov 20 20:51 pilot3
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc       533 Nov 21 21:07 boinc_task_state.xml
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc 907612357 Nov 21 21:22 HITS.47493068._001320.pool.root.1
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc      1033 Nov 21 21:23 memory_monitor_summary.json
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc   1526164 Nov 21 21:23 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc   2520699 Nov 21 21:23 log.47493068._001320.job.log.tgz.1
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc      8625 Nov 21 21:23 heartbeat.json
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc        95 Nov 21 21:24 pilot_heartbeat.json
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc      4883 Nov 21 21:24 pilotlog.txt
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:24 boinc_mmap_file
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc  11739666 Nov 21 21:24 log.47493068._001320.job.log.1
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:24 wrapper_checkpoint.txt
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc       353 Nov 21 21:24 output.list
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:24 runtime_log
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc  14284800 Nov 21 21:24 result.tar.gz
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc       662 Nov 21 21:24 wzqNDmcqcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGIFKDm8WWerm.diag
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc      8703 Nov 21 21:24 runtime_log.err
[2025-11-21 21:24:53] -rw-r--r--. 1 boinc boinc     20778 Nov 21 21:24 stderr.txt
[2025-11-21 21:24:53] HITS file was successfully produced:
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc 907612357 Nov 21 21:22 shared/HITS.pool.root.1
[2025-11-21 21:24:53]  *** Contents of shared directory: ***
[2025-11-21 21:24:53] total 1300696
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc 409395397 Nov 20 20:50 ATLAS.root_0
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:50 start_atlas.sh
[2025-11-21 21:24:53] -rw-r--r--. 2 boinc boinc    590099 Nov 20 20:50 input.tar.gz
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc 907612357 Nov 21 21:22 HITS.pool.root.1
[2025-11-21 21:24:53] -rw-------. 1 boinc boinc  14284800 Nov 21 21:24 result.tar.gz
21:24:55 (29765): run_atlas exited; CPU time 334837.561312
21:24:55 (29765): called boinc_finish(0)

</stderr_txt>
]]>

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