Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:31:02 (31991): wrapper (7.7.26015): starting
20:31:02 (31991): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:31:02] Arguments: --nthreads 8
[2025-11-20 20:31:02] Threads: 8
[2025-11-20 20:31:02] Checking for CVMFS
[2025-11-20 20:31:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:31:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:31:05] 2.11.2.0 9336 74226 88284 153088 2 85 15432564 25165825 4632 130560 2 21610044 99.877 12973290 1943 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:31:05] CVMFS is ok
[2025-11-20 20:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:31:05] Checking for apptainer binary...
[2025-11-20 20:31:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:31:05] Running /usr/bin/apptainer --version
[2025-11-20 20:31:05] apptainer version 1.3.2-1.el7
[2025-11-20 20:31:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:31:25] cg-vwn413.simple-grid.lan
[2025-11-20 20:31:25] apptainer works
[2025-11-20 20:31:25] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:31:25] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:31:26] Starting ATLAS job with PandaID=6891564794
[2025-11-20 20:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:53:12]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:53:12] 2025-11-21 20:52:35,484 | INFO     | sum of deviations: 5226138948334.717
[2025-11-21 21:53:12] 2025-11-21 20:52:35,485 | INFO     | mean x: 1763712893.2931619
[2025-11-21 21:53:12] 2025-11-21 20:52:35,485 | INFO     | mean y: 2869476.478672986
[2025-11-21 21:53:12] 2025-11-21 20:52:35,485 | INFO     | intersect: -9222621066.302261
[2025-11-21 21:53:12] 2025-11-21 20:52:35,487 | INFO     | chi2: 15.815073430085917
[2025-11-21 21:53:12] 2025-11-21 20:52:35,487 | INFO     | current chi2=15.815073430085917 (change=15.172681573323926 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,487 | INFO     | right removable region: 1476
[2025-11-21 21:53:12] 2025-11-21 20:52:35,489 | INFO     | sum of square deviations: 999122795038.0608
[2025-11-21 21:53:12] 2025-11-21 20:52:35,571 | INFO     | sum of deviations: 4109834918223.5684
[2025-11-21 21:53:12] 2025-11-21 20:52:35,571 | INFO     | mean x: 1763713198.2931619
[2025-11-21 21:53:12] 2025-11-21 20:52:35,571 | INFO     | mean y: 2871848.2735274206
[2025-11-21 21:53:12] 2025-11-21 20:52:35,571 | INFO     | intersect: -7252062304.040429
[2025-11-21 21:53:12] 2025-11-21 20:52:35,573 | INFO     | chi2: 13.574414838258182
[2025-11-21 21:53:12] 2025-11-21 20:52:35,574 | INFO     | current chi2=13.574414838258182 (change=27.19090334729683 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,576 | INFO     | sum of square deviations: 989009687989.6707
[2025-11-21 21:53:12] 2025-11-21 20:52:35,639 | INFO     | sum of deviations: 3528235947425.2964
[2025-11-21 21:53:12] 2025-11-21 20:52:35,640 | INFO     | mean x: 1763713350.7975543
[2025-11-21 21:53:12] 2025-11-21 20:52:35,640 | INFO     | mean y: 2880618.3600543477
[2025-11-21 21:53:12] 2025-11-21 20:52:35,640 | INFO     | intersect: -6289066690.959776
[2025-11-21 21:53:12] 2025-11-21 20:52:35,642 | INFO     | chi2: 9.47908817299241
[2025-11-21 21:53:12] 2025-11-21 20:52:35,642 | INFO     | current chi2=9.47908817299241 (change=30.169452709839746 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,645 | INFO     | sum of square deviations: 978965047341.2249
[2025-11-21 21:53:12] 2025-11-21 20:52:35,717 | INFO     | sum of deviations: 3002124574872.135
[2025-11-21 21:53:12] 2025-11-21 20:52:35,718 | INFO     | mean x: 1763713503.301977
[2025-11-21 21:53:12] 2025-11-21 20:52:35,718 | INFO     | mean y: 2888606.3653715067
[2025-11-21 21:53:12] 2025-11-21 20:52:35,718 | INFO     | intersect: -5405769921.001971
[2025-11-21 21:53:12] 2025-11-21 20:52:35,720 | INFO     | chi2: 6.211416655631915
[2025-11-21 21:53:12] 2025-11-21 20:52:35,720 | INFO     | current chi2=6.211416655631915 (change=34.472424538371385 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,722 | INFO     | sum of square deviations: 968988640530.22
[2025-11-21 21:53:12] 2025-11-21 20:52:35,785 | INFO     | sum of deviations: 2597396858691.0645
[2025-11-21 21:53:12] 2025-11-21 20:52:35,786 | INFO     | mean x: 1763713655.8064296
[2025-11-21 21:53:12] 2025-11-21 20:52:35,786 | INFO     | mean y: 2894791.1627906975
[2025-11-21 21:53:12] 2025-11-21 20:52:35,786 | INFO     | intersect: -4724781176.963571
[2025-11-21 21:53:12] 2025-11-21 20:52:35,788 | INFO     | chi2: 4.307605514532087
[2025-11-21 21:53:12] 2025-11-21 20:52:35,788 | INFO     | current chi2=4.307605514532087 (change=30.65019216467527 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,791 | INFO     | sum of square deviations: 959080770215.8632
[2025-11-21 21:53:12] 2025-11-21 20:52:35,864 | INFO     | sum of deviations: 2487479226867.445
[2025-11-21 21:53:12] 2025-11-21 20:52:35,864 | INFO     | mean x: 1763713808.306795
[2025-11-21 21:53:12] 2025-11-21 20:52:35,864 | INFO     | mean y: 2896482.8133150307
[2025-11-21 21:53:12] 2025-11-21 20:52:35,865 | INFO     | intersect: -4571485150.669945
[2025-11-21 21:53:12] 2025-11-21 20:52:35,866 | INFO     | chi2: 4.222645516378318
[2025-11-21 21:53:12] 2025-11-21 20:52:35,867 | INFO     | current chi2=4.222645516378318 (change=1.9723254106521346 %)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,867 | INFO     | left removable region: 50
[2025-11-21 21:53:12] 2025-11-21 20:52:35,869 | INFO     | sum of square deviations: 899156672856.2555
[2025-11-21 21:53:12] 2025-11-21 20:52:35,934 | INFO     | sum of deviations: 2780748784643.9326
[2025-11-21 21:53:12] 2025-11-21 20:52:35,934 | INFO     | mean x: 1763714387.8113604
[2025-11-21 21:53:12] 2025-11-21 20:52:35,934 | INFO     | mean y: 2910464.1150070126
[2025-11-21 21:53:12] 2025-11-21 20:52:35,934 | INFO     | intersect: -5451585719.276507
[2025-11-21 21:53:12] 2025-11-21 20:52:35,936 | INFO     | chi2: 0.4005906619525136
[2025-11-21 21:53:12] 2025-11-21 20:52:35,937 | INFO     | current memory leak: 3.09 B/s (using 1426 data points, chi2=0.40)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,939 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 21:53:12] 2025-11-21 20:52:35,939 | INFO     | ..............................
[2025-11-21 21:53:12] 2025-11-21 20:52:35,939 | INFO     | . Timing measurements:
[2025-11-21 21:53:12] 2025-11-21 20:52:35,939 | INFO     | . get job = 0 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . initial setup = 4 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . payload setup = 178 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . stage-in = 0 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . payload execution = 90556 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . stage-out = 5 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | . log creation = 2 s
[2025-11-21 21:53:12] 2025-11-21 20:52:35,940 | INFO     | ..............................
[2025-11-21 21:53:12] 2025-11-21 20:52:36,078 | INFO     | 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,078 | INFO     | job summary report
[2025-11-21 21:53:12] 2025-11-21 20:52:36,078 | INFO     | --------------------------------------------------
[2025-11-21 21:53:12] 2025-11-21 20:52:36,078 | INFO     | PanDA job id: 6891564794
[2025-11-21 21:53:12] 2025-11-21 20:52:36,078 | INFO     | task id: 47493068
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | errors: (none)
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | pilot state: finished 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | transexitcode: 0
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | exeerrorcode: 0
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | exeerrordiag: 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | exitcode: 0
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | exitmsg: OK
[2025-11-21 21:53:12] 2025-11-21 20:52:36,079 | INFO     | cpuconsumptiontime: 337000 s
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | nevents: 1000
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | neventsw: 0
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | pid: 10095
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | pgrp: 10095
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | corecount: 8
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | event service: False
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | sizes: {0: 2298797, 1: 2298825, 12: 2298825, 23: 2298853, 33: 2298881, 44: 2298937, 55: 2299093, 66: 2299121, 76: 2299149, 87: 2299205, 98: 2299233, 106: 2299803, 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,080 | INFO     | --------------------------------------------------
[2025-11-21 21:53:12] 2025-11-21 20:52:36,081 | INFO     | 
[2025-11-21 21:53:12] 2025-11-21 20:52:36,081 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-21 21:53:12] 2025-11-21 20:52:36,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:53:12] 2025-11-21 20:52:36,357 | INFO     | job 6891564794 has completed (purged errors)
[2025-11-21 21:53:12] 2025-11-21 20:52:36,358 | INFO     | overall cleanup function is called
[2025-11-21 21:53:12] 2025-11-21 20:52:37,378 | INFO     | --- collectZombieJob: --- 10, [10095]
[2025-11-21 21:53:12] 2025-11-21 20:52:37,379 | INFO     | zombie collector waiting for pid 10095
[2025-11-21 21:53:12] 2025-11-21 20:52:37,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:53:12] 2025-11-21 20:52:37,379 | INFO     | collected zombie processes
[2025-11-21 21:53:12] 2025-11-21 20:52:37,379 | INFO     | will attempt to kill all subprocesses of pid=10095
[2025-11-21 21:53:12] 2025-11-21 20:52:37,511 | INFO     | process IDs to be killed: [10095] (in reverse order)
[2025-11-21 21:53:12] 2025-11-21 20:52:38,387 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:53:12] 2025-11-21 20:52:38,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:53:12] 2025-11-21 20:52:38,391 | INFO     | did not find any defunct processes belonging to 10095
[2025-11-21 21:53:12] 2025-11-21 20:52:38,394 | INFO     | did not find any defunct processes belonging to 10095
[2025-11-21 21:53:12] 2025-11-21 20:52:38,431 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:53:12] 2025-11-21 20:52:38,431 | INFO     | ready for new job
[2025-11-21 21:53:12] 2025-11-21 20:52:38,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:53:12] 2025-11-21 20:52:38,438 | INFO     | ***************************************
[2025-11-21 21:53:12] 2025-11-21 20:52:38,438 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:53:12] 2025-11-21 20:52:38,439 | INFO     | ***************************************
[2025-11-21 21:53:12] 2025-11-21 20:52:38,439 | INFO     | 
[2025-11-21 21:53:12] 2025-11-21 20:52:38,439 | INFO     | pilot is running in a VM
[2025-11-21 21:53:12] 2025-11-21 20:52:38,440 | INFO     | architecture information:
[2025-11-21 21:53:12] 2025-11-21 20:52:38,446 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:53:12] 2025-11-21 20:52:38,565 | INFO     | cat /etc/os-release:
[2025-11-21 21:53:12] NAME="CentOS Linux"
[2025-11-21 21:53:12] VERSION="7 (Core)"
[2025-11-21 21:53:12] ID="centos"
[2025-11-21 21:53:12] ID_LIKE="rhel fedora"
[2025-11-21 21:53:12] VERSION_ID="7"
[2025-11-21 21:53:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:53:12] ANSI_COLOR="0;31"
[2025-11-21 21:53:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:53:12] HOME_URL="https://www.centos.org/"
[2025-11-21 21:53:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:53:12] 
[2025-11-21 21:53:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:53:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:53:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:53:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:53:12] 
[2025-11-21 21:53:12] 2025-11-21 20:52:38,565 | INFO     | ***************************************
[2025-11-21 21:53:12] 2025-11-21 20:52:39,069 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-21 21:53:12] 2025-11-21 20:52:39,320 | INFO     | sufficient remaining disk space (494906900480 B)
[2025-11-21 21:53:12] 2025-11-21 20:52:39,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:53:12] 2025-11-21 20:52:39,321 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:53:12] 2025-11-21 20:52:39,321 | INFO     | update_server=False
[2025-11-21 21:53:12] 2025-11-21 20:52:39,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:53:12] 2025-11-21 20:52:39,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:53:12] 2025-11-21 20:52:39,382 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 21:53:12] 2025-11-21 20:52:39,383 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 21:53:12] 2025-11-21 20:52:39,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:53:12] 2025-11-21 20:52:39,383 | INFO     | will abort loop
[2025-11-21 21:53:12] 2025-11-21 20:52:39,505 | INFO     | all data control threads have been joined
[2025-11-21 21:53:12] 2025-11-21 20:52:40,195 | INFO     | all job control threads have been joined
[2025-11-21 21:53:12] 2025-11-21 20:52:40,328 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:40,390 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:40,411 | INFO     | all payload control threads have been joined
[2025-11-21 21:53:12] 2025-11-21 20:52:40,498 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:40,512 | INFO     | [data] control thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:40,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:40,996 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:53:12] 2025-11-21 20:52:41,130 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,202 | INFO     | [job] control thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,230 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,329 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,340 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,413 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,417 | INFO     | [payload] control thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,486 | INFO     | [job] validate thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:41,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:53:12] 2025-11-21 20:52:42,102 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:45,499 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:53:12] 2025-11-21 20:52:59,043 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:53:12] 2025-11-21 20:53:00,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336952862528)>', '<ExcThread(monitor, started 140336725927680)>']
[2025-11-21 21:53:12] 2025-11-21 20:53:05,097 | INFO     | all workflow threads have been joined
[2025-11-21 21:53:12] 2025-11-21 20:53:05,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:53:12] 2025-11-21 20:53:05,098 | INFO     | traces error code: 0
[2025-11-21 21:53:12] 2025-11-21 20:53:05,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:53:12] 2025-11-21 20:53:07,978 | INFO     | PID=3439 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 21:53:12] 2025-11-21 20:53:07,978 | INFO     | .. there are 9 such processes running
[2025-11-21 21:53:12] 2025-11-21 20:53:07,979 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:53:12] 2025-11-21 20:53:07,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:53:12] 2025-11-21 20:53:07,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:53:12] 2025-11-21 20:53:07,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:53:12] 2025-11-21 20:53:07,979 | INFO     | [monitor] control thread has ended
[2025-11-21 21:53:12] 2025-11-21 20:53:08,363 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:53:12] 2025-11-21 20:53:08,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:53:12] 2025-11-21 20:53:08,470 [wrapper] pilotpid: 3439
[2025-11-21 21:53:12] 2025-11-21 20:53:08,514 [wrapper] Pilot exit status: 0
[2025-11-21 21:53:12] 2025-11-21 20:53:08,791 [wrapper] pandaids: 6891564794
[2025-11-21 21:53:12] 2025-11-21 20:53:09,766 [wrapper] cleanup supervisor_pilot  4494 3440
[2025-11-21 21:53:12] 2025-11-21 20:53:09,898 [wrapper] Test setup, not cleaning
[2025-11-21 21:53:12] 2025-11-21 20:53:10,012 [wrapper] apfmon messages muted
[2025-11-21 21:53:12] 2025-11-21 20:53:10,068 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:53:12] 2025-11-21 20:53:10,155 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:53:12]  *** Error codes and diagnostics ***
[2025-11-21 21:53:12]     "exeErrorCode": 0,
[2025-11-21 21:53:12]     "exeErrorDiag": "",
[2025-11-21 21:53:12]     "pilotErrorCode": 0,
[2025-11-21 21:53:12]     "pilotErrorDiag": "",
[2025-11-21 21:53:12]  *** Listing of results directory ***
[2025-11-21 21:53:12] total 1331748
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-21 21:53:12] -rwx------. 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:53:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:31 run_atlas
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:31 job.xml
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc      6391 Nov 20 20:31 init_data.xml
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc 409050729 Nov 20 20:31 EVNT.47493065._000124.pool.root.1
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:31 start_atlas.sh
[2025-11-21 21:53:12] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:31 shared
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc    590103 Nov 20 20:31 input.tar.gz
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:31 boinc_lockfile
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc      2773 Nov 20 20:31 pandaJob.out
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc    989440 Nov 20 20:35 agis_schedconf.cvmfs.json
[2025-11-21 21:53:12] drwx------. 5 boinc boinc      4096 Nov 20 20:35 pilot3
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc       533 Nov 21 21:38 boinc_task_state.xml
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc 921302587 Nov 21 21:50 HITS.47493068._001239.pool.root.1
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc      1033 Nov 21 21:51 memory_monitor_summary.json
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc   1526164 Nov 21 21:51 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc   2560769 Nov 21 21:51 log.47493068._001239.job.log.tgz.1
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc      8626 Nov 21 21:52 heartbeat.json
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:52 boinc_mmap_file
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:52 wrapper_checkpoint.txt
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc        95 Nov 21 21:53 pilot_heartbeat.json
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc       819 Nov 21 21:53 pilotlog.txt
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc  12164046 Nov 21 21:53 log.47493068._001239.job.log.1
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc       353 Nov 21 21:53 output.list
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:53 runtime_log
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc  14745600 Nov 21 21:53 result.tar.gz
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc      8717 Nov 21 21:53 runtime_log.err
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc       662 Nov 21 21:53 NV4MDmSqcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmASFKDm7wmF8m.diag
[2025-11-21 21:53:12] -rw-r--r--. 1 boinc boinc     20884 Nov 21 21:53 stderr.txt
[2025-11-21 21:53:12] HITS file was successfully produced:
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc 921302587 Nov 21 21:50 shared/HITS.pool.root.1
[2025-11-21 21:53:12]  *** Contents of shared directory: ***
[2025-11-21 21:53:12] total 1314172
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc 409050729 Nov 20 20:31 ATLAS.root_0
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:31 start_atlas.sh
[2025-11-21 21:53:12] -rw-r--r--. 2 boinc boinc    590103 Nov 20 20:31 input.tar.gz
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc 921302587 Nov 21 21:50 HITS.pool.root.1
[2025-11-21 21:53:12] -rw-------. 1 boinc boinc  14745600 Nov 21 21:53 result.tar.gz
21:53:13 (31991): run_atlas exited; CPU time 337544.445297
21:53:13 (31991): called boinc_finish(0)

</stderr_txt>
]]>

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