Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:21:21 (7619): wrapper (7.7.26015): starting
02:21:21 (7619): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 02:21:21] Arguments: --nthreads 8
[2025-11-20 02:21:21] Threads: 8
[2025-11-20 02:21:21] Checking for CVMFS
[2025-11-20 02:21:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 02:21:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 02:21:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 02:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 02:21:24] 2.11.2.0 31392 275914 138280 153063 2 85 24356301 25165825 4250 130560 4 136802410 99.875 77753407 2996 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 02:21:24] CVMFS is ok
[2025-11-20 02:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 02:21:24] Checking for apptainer binary...
[2025-11-20 02:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 02:21:24] Running /usr/bin/apptainer --version
[2025-11-20 02:21:24] apptainer version 1.3.2-1.el7
[2025-11-20 02:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 02:21:53] cg-vwn267.simple-grid.lan
[2025-11-20 02:21:53] apptainer works
[2025-11-20 02:21:55] Set ATHENA_PROC_NUMBER=8
[2025-11-20 02:21:55] Set ATHENA_CORE_NUMBER=8
[2025-11-20 02:21:55] Starting ATLAS job with PandaID=6891558679
[2025-11-20 02:21:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 03:41:53]  *** The last 200 lines of the pilot log: ***
[2025-11-21 03:41:53] 2025-11-21 02:41:04,705 | INFO     | monitor loop #6105: job 0:6891558679 is in state 'finished'
[2025-11-21 03:41:53] 2025-11-21 02:41:04,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:41:53] 2025-11-21 02:41:05,635 | INFO     | time since job start (90910s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:07,210 | INFO     | monitor loop #6106: job 0:6891558679 is in state 'finished'
[2025-11-21 03:41:53] 2025-11-21 02:41:07,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:41:53] 2025-11-21 02:41:07,644 | INFO     | time since job start (90912s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:09,655 | INFO     | time since job start (90914s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:09,726 | INFO     | monitor loop #6107: job 0:6891558679 is in state 'finished'
[2025-11-21 03:41:53] 2025-11-21 02:41:09,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:41:53] 2025-11-21 02:41:11,662 | INFO     | time since job start (90916s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:12,231 | INFO     | monitor loop #6108: job 0:6891558679 is in state 'finished'
[2025-11-21 03:41:53] 2025-11-21 02:41:12,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:41:53] 2025-11-21 02:41:13,668 | INFO     | time since job start (90918s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,614 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 03:41:53] 2025-11-21 02:41:14,615 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 03:41:53] 2025-11-21 02:41:14,617 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891558679/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,618 | INFO     | extracted standard info from prmon json
[2025-11-21 03:41:53] 2025-11-21 02:41:14,618 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 03:41:53] 2025-11-21 02:41:14,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 03:41:53] 2025-11-21 02:41:14,646 | INFO     | fitting pss+swap vs Time
[2025-11-21 03:41:53] 2025-11-21 02:41:14,648 | INFO     | sum of square deviations: 1007263084978.0547
[2025-11-21 03:41:53] 2025-11-21 02:41:14,718 | INFO     | sum of deviations: 3159628835149.122
[2025-11-21 03:41:53] 2025-11-21 02:41:14,718 | INFO     | mean x: 1763647611.295071
[2025-11-21 03:41:53] 2025-11-21 02:41:14,718 | INFO     | mean y: 2844665.7846049964
[2025-11-21 03:41:53] 2025-11-21 02:41:14,718 | INFO     | intersect: -5529445686.949988
[2025-11-21 03:41:53] 2025-11-21 02:41:14,720 | INFO     | chi2: 23.595049605618062
[2025-11-21 03:41:53] 2025-11-21 02:41:14,722 | INFO     | sum of square deviations: 997096204904.6405
[2025-11-21 03:41:53] 2025-11-21 02:41:14,750 | INFO     | monitor loop #6109: job 0:6891558679 is in state 'finished'
[2025-11-21 03:41:53] 2025-11-21 02:41:14,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,792 | INFO     | sum of deviations: 3646105955263.914
[2025-11-21 03:41:53] 2025-11-21 02:41:14,793 | INFO     | mean x: 1763647458.799458
[2025-11-21 03:41:53] 2025-11-21 02:41:14,793 | INFO     | mean y: 2851961.391598916
[2025-11-21 03:41:53] 2025-11-21 02:41:14,793 | INFO     | intersect: -6446320616.824926
[2025-11-21 03:41:53] 2025-11-21 02:41:14,795 | INFO     | chi2: 20.42603853089332
[2025-11-21 03:41:53] 2025-11-21 02:41:14,795 | INFO     | current chi2=20.42603853089332 (change=13.430830312686398 %)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,795 | INFO     | right removable region: 1475
[2025-11-21 03:41:53] 2025-11-21 02:41:14,797 | INFO     | sum of square deviations: 997095034924.6388
[2025-11-21 03:41:53] 2025-11-21 02:41:14,868 | INFO     | sum of deviations: 2536685436929.5264
[2025-11-21 03:41:53] 2025-11-21 02:41:14,869 | INFO     | mean x: 1763647763.799458
[2025-11-21 03:41:53] 2025-11-21 02:41:14,869 | INFO     | mean y: 2854008.4071815717
[2025-11-21 03:41:53] 2025-11-21 02:41:14,869 | INFO     | intersect: -4483999743.343317
[2025-11-21 03:41:53] 2025-11-21 02:41:14,871 | INFO     | chi2: 18.880763096235352
[2025-11-21 03:41:53] 2025-11-21 02:41:14,871 | INFO     | current chi2=18.880763096235352 (change=19.979981344308012 %)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,871 | INFO     | left removable region: 10
[2025-11-21 03:41:53] 2025-11-21 02:41:14,873 | INFO     | sum of square deviations: 974968057958.9257
[2025-11-21 03:41:53] 2025-11-21 02:41:14,931 | INFO     | sum of deviations: 2601865256896.0127
[2025-11-21 03:41:53] 2025-11-21 02:41:14,931 | INFO     | mean x: 1763647733.309215
[2025-11-21 03:41:53] 2025-11-21 02:41:14,932 | INFO     | mean y: 2871027.3023890783
[2025-11-21 03:41:53] 2025-11-21 02:41:14,932 | INFO     | intersect: -4703717793.983869
[2025-11-21 03:41:53] 2025-11-21 02:41:14,933 | INFO     | chi2: 11.611222725926792
[2025-11-21 03:41:53] 2025-11-21 02:41:14,934 | INFO     | current memory leak: 2.67 B/s (using 1465 data points, chi2=11.61)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | ..............................
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | . Timing measurements:
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | . get job = 0 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | . initial setup = 4 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,936 | INFO     | . payload setup = 148 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,937 | INFO     | . stage-in = 0 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,937 | INFO     | . payload execution = 90451 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,937 | INFO     | . stage-out = 5 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,937 | INFO     | . log creation = 2 s
[2025-11-21 03:41:53] 2025-11-21 02:41:14,937 | INFO     | ..............................
[2025-11-21 03:41:53] 2025-11-21 02:41:15,523 | INFO     | 
[2025-11-21 03:41:53] 2025-11-21 02:41:15,523 | INFO     | job summary report
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | --------------------------------------------------
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | PanDA job id: 6891558679
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | task id: 47493068
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | errors: (none)
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | pilot state: finished 
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | transexitcode: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | exeerrorcode: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:15,524 | INFO     | exeerrordiag: 
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | exitcode: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | exitmsg: OK
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | cpuconsumptiontime: 335232 s
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | nevents: 1000
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | neventsw: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | pid: 17980
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | pgrp: 17980
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | corecount: 8
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | event service: False
[2025-11-21 03:41:53] 2025-11-21 02:41:15,525 | INFO     | sizes: {0: 2296969, 1: 2297053, 2: 2297252, 13: 2297252, 23: 2297308, 34: 2297336, 45: 2297492, 56: 2297520, 66: 2297548, 77: 2297576, 88: 2297632, 99: 2297940, 10
[2025-11-21 03:41:53] 2025-11-21 02:41:15,526 | INFO     | --------------------------------------------------
[2025-11-21 03:41:53] 2025-11-21 02:41:15,526 | INFO     | 
[2025-11-21 03:41:53] 2025-11-21 02:41:15,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-21 03:41:53] 2025-11-21 02:41:15,694 | INFO     | time since job start (90920s) is within the limit (172800.0s)
[2025-11-21 03:41:53] 2025-11-21 02:41:16,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,051 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 03:41:53] 2025-11-21 02:41:16,052 | INFO     | job 6891558679 has completed (purged errors)
[2025-11-21 03:41:53] 2025-11-21 02:41:16,052 | INFO     | overall cleanup function is called
[2025-11-21 03:41:53] 2025-11-21 02:41:17,079 | INFO     | --- collectZombieJob: --- 10, [17980]
[2025-11-21 03:41:53] 2025-11-21 02:41:17,079 | INFO     | zombie collector waiting for pid 17980
[2025-11-21 03:41:53] 2025-11-21 02:41:17,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 03:41:53] 2025-11-21 02:41:17,080 | INFO     | collected zombie processes
[2025-11-21 03:41:53] 2025-11-21 02:41:17,080 | INFO     | will attempt to kill all subprocesses of pid=17980
[2025-11-21 03:41:53] 2025-11-21 02:41:17,216 | INFO     | process IDs to be killed: [17980] (in reverse order)
[2025-11-21 03:41:53] 2025-11-21 02:41:17,797 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 03:41:53] 2025-11-21 02:41:17,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 03:41:53] 2025-11-21 02:41:17,801 | INFO     | did not find any defunct processes belonging to 17980
[2025-11-21 03:41:53] 2025-11-21 02:41:17,804 | INFO     | did not find any defunct processes belonging to 17980
[2025-11-21 03:41:53] 2025-11-21 02:41:17,862 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 03:41:53] 2025-11-21 02:41:17,863 | INFO     | ready for new job
[2025-11-21 03:41:53] 2025-11-21 02:41:17,863 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 03:41:53] 2025-11-21 02:41:17,870 | INFO     | ***************************************
[2025-11-21 03:41:53] 2025-11-21 02:41:17,870 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 03:41:53] 2025-11-21 02:41:17,870 | INFO     | ***************************************
[2025-11-21 03:41:53] 2025-11-21 02:41:17,870 | INFO     | 
[2025-11-21 03:41:53] 2025-11-21 02:41:17,871 | INFO     | pilot is running in a VM
[2025-11-21 03:41:53] 2025-11-21 02:41:17,871 | INFO     | architecture information:
[2025-11-21 03:41:53] 2025-11-21 02:41:17,879 | INFO     | executing command: cat /etc/os-release
[2025-11-21 03:41:53] 2025-11-21 02:41:18,239 | INFO     | cat /etc/os-release:
[2025-11-21 03:41:53] NAME="CentOS Linux"
[2025-11-21 03:41:53] VERSION="7 (Core)"
[2025-11-21 03:41:53] ID="centos"
[2025-11-21 03:41:53] ID_LIKE="rhel fedora"
[2025-11-21 03:41:53] VERSION_ID="7"
[2025-11-21 03:41:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 03:41:53] ANSI_COLOR="0;31"
[2025-11-21 03:41:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 03:41:53] HOME_URL="https://www.centos.org/"
[2025-11-21 03:41:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 03:41:53] 
[2025-11-21 03:41:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 03:41:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 03:41:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 03:41:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 03:41:53] 
[2025-11-21 03:41:53] 2025-11-21 02:41:18,239 | INFO     | ***************************************
[2025-11-21 03:41:53] 2025-11-21 02:41:18,743 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-21 03:41:53] 2025-11-21 02:41:18,978 | INFO     | sufficient remaining disk space (495028535296 B)
[2025-11-21 03:41:53] 2025-11-21 02:41:18,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 03:41:53] 2025-11-21 02:41:18,978 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 03:41:53] 2025-11-21 02:41:18,978 | INFO     | update_server=False
[2025-11-21 03:41:53] 2025-11-21 02:41:18,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 03:41:53] 2025-11-21 02:41:18,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:41:53] 2025-11-21 02:41:18,980 | INFO     | aborting loop
[2025-11-21 03:41:53] 2025-11-21 02:41:19,056 | INFO     | all job control threads have been joined
[2025-11-21 03:41:53] 2025-11-21 02:41:19,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 03:41:53] 2025-11-21 02:41:19,882 | INFO     | all data control threads have been joined
[2025-11-21 03:41:53] 2025-11-21 02:41:19,985 | INFO     | [job] retrieve thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:19,986 | INFO     | [job] job monitor thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,062 | INFO     | [job] control thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:41:53] 2025-11-21 02:41:20,170 | INFO     | [payload] validate_post thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,347 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,471 | INFO     | all payload control threads have been joined
[2025-11-21 03:41:53] 2025-11-21 02:41:20,863 | INFO     | [job] validate thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,877 | INFO     | [payload] failed_post thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:20,888 | INFO     | [data] control thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,054 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,094 | INFO     | [job] queue monitor thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 03:41:53] 2025-11-21 02:41:21,334 | INFO     | [data] copytool_out thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,422 | INFO     | [data] copytool_in thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,433 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:21,477 | INFO     | [payload] control thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:25,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 03:41:53] 2025-11-21 02:41:33,442 | INFO     | [monitor] cgroup control has ended
[2025-11-21 03:41:53] 2025-11-21 02:41:35,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674044495680)>', '<ExcThread(monitor, started 140673817560832)>']
[2025-11-21 03:41:53] 2025-11-21 02:41:40,067 | INFO     | all workflow threads have been joined
[2025-11-21 03:41:53] 2025-11-21 02:41:40,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 03:41:53] 2025-11-21 02:41:40,068 | INFO     | traces error code: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:40,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 03:41:53] 2025-11-21 02:41:48,900 | INFO     | PID=11391 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 03:41:53] 2025-11-21 02:41:48,900 | INFO     | .. there are 9 such processes running
[2025-11-21 03:41:53] 2025-11-21 02:41:48,901 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 03:41:53] 2025-11-21 02:41:48,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 03:41:53] 2025-11-21 02:41:48,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 03:41:53] 2025-11-21 02:41:48,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 03:41:53] 2025-11-21 02:41:48,901 | INFO     | [monitor] control thread has ended
[2025-11-21 03:41:53] 2025-11-21 02:41:49,280 [wrapper] ==== pilot stdout END ====
[2025-11-21 03:41:53] 2025-11-21 02:41:49,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 03:41:53] 2025-11-21 02:41:49,470 [wrapper] pilotpid: 11391
[2025-11-21 03:41:53] 2025-11-21 02:41:49,548 [wrapper] Pilot exit status: 0
[2025-11-21 03:41:53] 2025-11-21 02:41:49,916 [wrapper] pandaids: 6891558679
[2025-11-21 03:41:53] 2025-11-21 02:41:50,448 [wrapper] cleanup supervisor_pilot 16108 11392
[2025-11-21 03:41:53] 2025-11-21 02:41:50,548 [wrapper] Test setup, not cleaning
[2025-11-21 03:41:53] 2025-11-21 02:41:50,614 [wrapper] apfmon messages muted
[2025-11-21 03:41:53] 2025-11-21 02:41:50,712 [wrapper] ==== wrapper stdout END ====
[2025-11-21 03:41:53] 2025-11-21 02:41:50,793 [wrapper] ==== wrapper stderr END ====
[2025-11-21 03:41:53]  *** Error codes and diagnostics ***
[2025-11-21 03:41:53]     "exeErrorCode": 0,
[2025-11-21 03:41:53]     "exeErrorDiag": "",
[2025-11-21 03:41:53]     "pilotErrorCode": 0,
[2025-11-21 03:41:53]     "pilotErrorDiag": "",
[2025-11-21 03:41:53]  *** Listing of results directory ***
[2025-11-21 03:41:53] total 1315820
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 03:41:53] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc       100 Nov 20 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 03:41:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 02:21 run_atlas
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc       105 Nov 20 02:21 job.xml
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc 407179836 Nov 20 02:21 EVNT.47493065._000072.pool.root.1
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc      6390 Nov 20 02:21 init_data.xml
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc     15120 Nov 20 02:21 start_atlas.sh
[2025-11-21 03:41:53] drwxrwx--x. 2 boinc boinc        68 Nov 20 02:21 shared
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc    590100 Nov 20 02:21 input.tar.gz
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc         0 Nov 20 02:21 boinc_lockfile
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc      2771 Nov 20 02:21 pandaJob.out
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc    989451 Nov 20 02:25 agis_schedconf.cvmfs.json
[2025-11-21 03:41:53] drwx------. 5 boinc boinc      4096 Nov 20 02:25 pilot3
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc       533 Nov 21 03:13 boinc_task_state.xml
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc 906981566 Nov 21 03:38 HITS.47493068._000714.pool.root.1
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc      1030 Nov 21 03:39 memory_monitor_summary.json
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc   1526164 Nov 21 03:39 agis_ddmendpoints.agis.ALL.json
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc   2553884 Nov 21 03:39 log.47493068._000714.job.log.tgz.1
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc      8635 Nov 21 03:41 heartbeat.json
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc      8192 Nov 21 03:41 boinc_mmap_file
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc        29 Nov 21 03:41 wrapper_checkpoint.txt
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc       820 Nov 21 03:41 pilotlog.txt
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc        95 Nov 21 03:41 pilot_heartbeat.json
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc  12111135 Nov 21 03:41 log.47493068._000714.job.log.1
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc       353 Nov 21 03:41 output.list
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc       620 Nov 21 03:41 runtime_log
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc  14684160 Nov 21 03:41 result.tar.gz
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc      8703 Nov 21 03:41 runtime_log.err
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc       662 Nov 21 03:41 2R0MDmckcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQNFKDm7u9aSm.diag
[2025-11-21 03:41:53] -rw-r--r--. 1 boinc boinc     21439 Nov 21 03:41 stderr.txt
[2025-11-21 03:41:53] HITS file was successfully produced:
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc 906981566 Nov 21 03:38 shared/HITS.pool.root.1
[2025-11-21 03:41:53]  *** Contents of shared directory: ***
[2025-11-21 03:41:53] total 1298304
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc 407179836 Nov 20 02:21 ATLAS.root_0
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc     15120 Nov 20 02:21 start_atlas.sh
[2025-11-21 03:41:53] -rw-r--r--. 2 boinc boinc    590100 Nov 20 02:21 input.tar.gz
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc 906981566 Nov 21 03:38 HITS.pool.root.1
[2025-11-21 03:41:53] -rw-------. 1 boinc boinc  14684160 Nov 21 03:41 result.tar.gz
03:41:54 (7619): run_atlas exited; CPU time 335730.853094
03:41:54 (7619): called boinc_finish(0)

</stderr_txt>
]]>

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