Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:02 (13951): wrapper (7.7.26015): starting
19:23:02 (13951): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:23:02] Arguments: --nthreads 8
[2025-11-20 19:23:02] Threads: 8
[2025-11-20 19:23:02] Checking for CVMFS
[2025-11-20 19:23:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:23:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:23:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:23:05] 2.11.2.0 27084 276911 141676 153088 2 294 13898286 25165824 4068 130560 2 133427492 99.878 76063973 3069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:23:05] CVMFS is ok
[2025-11-20 19:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:23:05] Checking for apptainer binary...
[2025-11-20 19:23:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:23:05] Running /usr/bin/apptainer --version
[2025-11-20 19:23:05] apptainer version 1.3.2-1.el7
[2025-11-20 19:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:23:06] cg-vwn405.simple-grid.lan
[2025-11-20 19:23:06] apptainer works
[2025-11-20 19:23:06] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:23:06] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:23:06] Starting ATLAS job with PandaID=6891558409
[2025-11-20 19:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 20:52:22]  *** The last 200 lines of the pilot log: ***
[2025-11-21 20:52:22] 2025-11-21 19:51:14,009 | INFO     | mean x: 1763708837.4483678
[2025-11-21 20:52:22] 2025-11-21 19:51:14,009 | INFO     | mean y: 2896088.297135243
[2025-11-21 20:52:22] 2025-11-21 19:51:14,009 | INFO     | intersect: -3955355355.6020594
[2025-11-21 20:52:22] 2025-11-21 19:51:14,011 | INFO     | chi2: 8.862761085709142
[2025-11-21 20:52:22] 2025-11-21 19:51:14,013 | INFO     | sum of square deviations: 1038180460590.7236
[2025-11-21 20:52:22] 2025-11-21 19:51:14,080 | INFO     | sum of deviations: 2859434714151.7603
[2025-11-21 20:52:22] 2025-11-21 19:51:14,081 | INFO     | mean x: 1763708684.9532084
[2025-11-21 20:52:22] 2025-11-21 19:51:14,081 | INFO     | mean y: 2903476.496657754
[2025-11-21 20:52:22] 2025-11-21 19:51:14,081 | INFO     | intersect: -4854835645.7909775
[2025-11-21 20:52:22] 2025-11-21 19:51:14,083 | INFO     | chi2: 5.778314362418703
[2025-11-21 20:52:22] 2025-11-21 19:51:14,083 | INFO     | current chi2=5.778314362418703 (change=34.80232281409447 %)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,085 | INFO     | sum of square deviations: 1027806305870.1304
[2025-11-21 20:52:22] 2025-11-21 19:51:14,146 | INFO     | sum of deviations: 3241725552403.691
[2025-11-21 20:52:22] 2025-11-21 19:51:14,147 | INFO     | mean x: 1763708532.4580817
[2025-11-21 20:52:22] 2025-11-21 19:51:14,147 | INFO     | mean y: 2909092.714956405
[2025-11-21 20:52:22] 2025-11-21 19:51:14,147 | INFO     | intersect: -5559869598.179955
[2025-11-21 20:52:22] 2025-11-21 19:51:14,149 | INFO     | chi2: 3.7475816929975676
[2025-11-21 20:52:22] 2025-11-21 19:51:14,149 | INFO     | current chi2=3.7475816929975676 (change=35.144032360522274 %)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,152 | INFO     | sum of square deviations: 1017501501286.9674
[2025-11-21 20:52:22] 2025-11-21 19:51:14,221 | INFO     | sum of deviations: 3444877989524.762
[2025-11-21 20:52:22] 2025-11-21 19:51:14,221 | INFO     | mean x: 1763708379.962988
[2025-11-21 20:52:22] 2025-11-21 19:51:14,221 | INFO     | mean y: 2912098.377523553
[2025-11-21 20:52:22] 2025-11-21 19:51:14,221 | INFO     | intersect: -5968342165.513059
[2025-11-21 20:52:22] 2025-11-21 19:51:14,223 | INFO     | chi2: 3.1605852297941697
[2025-11-21 20:52:22] 2025-11-21 19:51:14,224 | INFO     | current chi2=3.1605852297941697 (change=15.663340022719524 %)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,224 | INFO     | right removable region: 1485
[2025-11-21 20:52:22] 2025-11-21 19:51:14,226 | INFO     | sum of square deviations: 1038179134450.7239
[2025-11-21 20:52:22] 2025-11-21 19:51:14,295 | INFO     | sum of deviations: 1872994219555.789
[2025-11-21 20:52:22] 2025-11-21 19:51:14,296 | INFO     | mean x: 1763708989.9532084
[2025-11-21 20:52:22] 2025-11-21 19:51:14,296 | INFO     | mean y: 2903099.7112299465
[2025-11-21 20:52:22] 2025-11-21 19:51:14,296 | INFO     | intersect: -3179030184.7683306
[2025-11-21 20:52:22] 2025-11-21 19:51:14,298 | INFO     | chi2: 6.18557168260469
[2025-11-21 20:52:22] 2025-11-21 19:51:14,298 | INFO     | current chi2=6.18557168260469 (change=30.207171074726546 %)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,301 | INFO     | sum of square deviations: 1027804292513.5095
[2025-11-21 20:52:22] 2025-11-21 19:51:14,362 | INFO     | sum of deviations: 1756524960276.1516
[2025-11-21 20:52:22] 2025-11-21 19:51:14,362 | INFO     | mean x: 1763709142.453387
[2025-11-21 20:52:22] 2025-11-21 19:51:14,363 | INFO     | mean y: 2904811.455399061
[2025-11-21 20:52:22] 2025-11-21 19:51:14,363 | INFO     | intersect: -3011286853.1954865
[2025-11-21 20:52:22] 2025-11-21 19:51:14,365 | INFO     | chi2: 6.078917230268824
[2025-11-21 20:52:22] 2025-11-21 19:51:14,365 | INFO     | current chi2=6.078917230268824 (change=1.7242456770132233 %)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,365 | INFO     | left removable region: 20
[2025-11-21 20:52:22] 2025-11-21 19:51:14,367 | INFO     | sum of square deviations: 974969698919.0756
[2025-11-21 20:52:22] 2025-11-21 19:51:14,428 | INFO     | sum of deviations: 2706132873749.2314
[2025-11-21 20:52:22] 2025-11-21 19:51:14,429 | INFO     | mean x: 1763708959.4716723
[2025-11-21 20:52:22] 2025-11-21 19:51:14,429 | INFO     | mean y: 2923993.2587030716
[2025-11-21 20:52:22] 2025-11-21 19:51:14,429 | INFO     | intersect: -4892439216.740398
[2025-11-21 20:52:22] 2025-11-21 19:51:14,431 | INFO     | chi2: 0.20823733118456184
[2025-11-21 20:52:22] 2025-11-21 19:51:14,431 | INFO     | current memory leak: 2.78 B/s (using 1465 data points, chi2=0.21)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | ..............................
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . Timing measurements:
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . get job = 0 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . initial setup = 3 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . payload setup = 15 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . stage-in = 0 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,434 | INFO     | . payload execution = 91554 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,435 | INFO     | . stage-out = 4 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,435 | INFO     | . log creation = 1 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,435 | INFO     | ..............................
[2025-11-21 20:52:22] 2025-11-21 19:51:14,592 | INFO     | 
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | job summary report
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | --------------------------------------------------
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | PanDA job id: 6891558409
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | task id: 47493068
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | errors: (none)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | pilot state: finished 
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | transexitcode: 0
[2025-11-21 20:52:22] 2025-11-21 19:51:14,593 | INFO     | exeerrorcode: 0
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | exeerrordiag: 
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | exitcode: 0
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | exitmsg: OK
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | cpuconsumptiontime: 341314 s
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | nevents: 1000
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | neventsw: 0
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | pid: 29550
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | pgrp: 29550
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | corecount: 8
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | event service: False
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | sizes: {0: 2298621, 1: 2298820, 10: 2299082, 12: 2299110, 91573: 2363329, 91577: 2372323, 91580: 2372507, 91636: 2372753}
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | --------------------------------------------------
[2025-11-21 20:52:22] 2025-11-21 19:51:14,594 | INFO     | 
[2025-11-21 20:52:22] 2025-11-21 19:51:14,595 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-21 20:52:22] 2025-11-21 19:51:14,635 | INFO     | time since job start (91658s) is within the limit (172800.0s)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 20:52:22] 2025-11-21 19:51:14,682 | INFO     | job 6891558409 has completed (purged errors)
[2025-11-21 20:52:22] 2025-11-21 19:51:14,682 | INFO     | overall cleanup function is called
[2025-11-21 20:52:22] 2025-11-21 19:51:15,701 | INFO     | --- collectZombieJob: --- 10, [29550]
[2025-11-21 20:52:22] 2025-11-21 19:51:15,702 | INFO     | zombie collector waiting for pid 29550
[2025-11-21 20:52:22] 2025-11-21 19:51:15,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 20:52:22] 2025-11-21 19:51:15,702 | INFO     | collected zombie processes
[2025-11-21 20:52:22] 2025-11-21 19:51:15,702 | INFO     | will attempt to kill all subprocesses of pid=29550
[2025-11-21 20:52:22] 2025-11-21 19:51:15,818 | INFO     | process IDs to be killed: [29550] (in reverse order)
[2025-11-21 20:52:22] 2025-11-21 19:51:15,966 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 20:52:22] 2025-11-21 19:51:15,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 20:52:22] 2025-11-21 19:51:15,970 | INFO     | did not find any defunct processes belonging to 29550
[2025-11-21 20:52:22] 2025-11-21 19:51:15,973 | INFO     | did not find any defunct processes belonging to 29550
[2025-11-21 20:52:22] 2025-11-21 19:51:15,982 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 20:52:22] 2025-11-21 19:51:15,982 | INFO     | ready for new job
[2025-11-21 20:52:22] 2025-11-21 19:51:15,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 20:52:22] 2025-11-21 19:51:15,990 | INFO     | ***************************************
[2025-11-21 20:52:22] 2025-11-21 19:51:15,990 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 20:52:22] 2025-11-21 19:51:15,990 | INFO     | ***************************************
[2025-11-21 20:52:22] 2025-11-21 19:51:15,990 | INFO     | 
[2025-11-21 20:52:22] 2025-11-21 19:51:15,991 | INFO     | pilot is running in a VM
[2025-11-21 20:52:22] 2025-11-21 19:51:15,991 | INFO     | architecture information:
[2025-11-21 20:52:22] 2025-11-21 19:51:15,992 | INFO     | executing command: cat /etc/os-release
[2025-11-21 20:52:22] 2025-11-21 19:51:16,069 | INFO     | cat /etc/os-release:
[2025-11-21 20:52:22] NAME="CentOS Linux"
[2025-11-21 20:52:22] VERSION="7 (Core)"
[2025-11-21 20:52:22] ID="centos"
[2025-11-21 20:52:22] ID_LIKE="rhel fedora"
[2025-11-21 20:52:22] VERSION_ID="7"
[2025-11-21 20:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 20:52:22] ANSI_COLOR="0;31"
[2025-11-21 20:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 20:52:22] HOME_URL="https://www.centos.org/"
[2025-11-21 20:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 20:52:22] 
[2025-11-21 20:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 20:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 20:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 20:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 20:52:22] 
[2025-11-21 20:52:22] 2025-11-21 19:51:16,070 | INFO     | ***************************************
[2025-11-21 20:52:22] 2025-11-21 19:51:16,573 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-21 20:52:22] 2025-11-21 19:51:16,752 | INFO     | sufficient remaining disk space (493665386496 B)
[2025-11-21 20:52:22] 2025-11-21 19:51:16,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 20:52:22] 2025-11-21 19:51:16,753 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 20:52:22] 2025-11-21 19:51:16,753 | INFO     | update_server=False
[2025-11-21 20:52:22] 2025-11-21 19:51:16,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 20:52:22] 2025-11-21 19:51:16,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 20:52:22] 2025-11-21 19:51:17,176 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 20:52:22] 2025-11-21 19:51:17,177 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 20:52:22] 2025-11-21 19:51:17,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 20:52:22] 2025-11-21 19:51:17,177 | INFO     | will abort loop
[2025-11-21 20:52:22] 2025-11-21 19:51:17,759 | INFO     | [job] retrieve thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:17,774 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:17,820 | INFO     | all data control threads have been joined
[2025-11-21 20:52:22] 2025-11-21 19:51:18,151 | INFO     | all job control threads have been joined
[2025-11-21 20:52:22] 2025-11-21 19:51:18,184 | INFO     | [job] job monitor thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,201 | INFO     | [payload] failed_post thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,249 | INFO     | all payload control threads have been joined
[2025-11-21 20:52:22] 2025-11-21 19:51:18,564 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,776 | INFO     | [data] copytool_out thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,777 | INFO     | [payload] validate_post thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,780 | INFO     | [job] validate thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,827 | INFO     | [data] control thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:18,972 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:19,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 20:52:22] 2025-11-21 19:51:19,157 | INFO     | [job] control thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:19,255 | INFO     | [payload] control thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:19,256 | INFO     | [data] copytool_in thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:19,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 20:52:22] 2025-11-21 19:51:20,605 | INFO     | [job] queue monitor thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:23,074 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:27,555 | INFO     | job.realtimelogging is not enabled
[2025-11-21 20:52:22] 2025-11-21 19:51:28,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 20:52:22] 2025-11-21 19:51:47,817 | INFO     | PID=20687 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 20:52:22] 2025-11-21 19:51:47,817 | INFO     | .. there are 9 such processes running
[2025-11-21 20:52:22] 2025-11-21 19:51:47,817 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 20:52:22] 2025-11-21 19:51:47,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 20:52:22] 2025-11-21 19:51:47,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 20:52:22] 2025-11-21 19:52:16,325 | INFO     | [monitor] cgroup control has ended
[2025-11-21 20:52:22] 2025-11-21 19:52:16,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687795619648)>', '<ExcThread(monitor, started 139687318492928)>']
[2025-11-21 20:52:22] 2025-11-21 19:52:16,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 20:52:22] 2025-11-21 19:52:16,992 | INFO     | [monitor] control thread has ended
[2025-11-21 20:52:22] 2025-11-21 19:52:21,405 | INFO     | all workflow threads have been joined
[2025-11-21 20:52:22] 2025-11-21 19:52:21,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 20:52:22] 2025-11-21 19:52:21,406 | INFO     | traces error code: 0
[2025-11-21 20:52:22] 2025-11-21 19:52:21,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 20:52:22] 2025-11-21 19:52:21,662 [wrapper] ==== pilot stdout END ====
[2025-11-21 20:52:22] 2025-11-21 19:52:21,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 20:52:22] 2025-11-21 19:52:21,677 [wrapper] pilotpid: 20687
[2025-11-21 20:52:22] 2025-11-21 19:52:21,686 [wrapper] Pilot exit status: 0
[2025-11-21 20:52:22] 2025-11-21 19:52:21,818 [wrapper] pandaids: 6891558409
[2025-11-21 20:52:22] 2025-11-21 19:52:21,868 [wrapper] cleanup supervisor_pilot  8882 20688
[2025-11-21 20:52:22] 2025-11-21 19:52:21,872 [wrapper] Test setup, not cleaning
[2025-11-21 20:52:22] 2025-11-21 19:52:21,875 [wrapper] apfmon messages muted
[2025-11-21 20:52:22] 2025-11-21 19:52:21,881 [wrapper] ==== wrapper stdout END ====
[2025-11-21 20:52:22] 2025-11-21 19:52:21,885 [wrapper] ==== wrapper stderr END ====
[2025-11-21 20:52:22]  *** Error codes and diagnostics ***
[2025-11-21 20:52:22]     "exeErrorCode": 0,
[2025-11-21 20:52:22]     "exeErrorDiag": "",
[2025-11-21 20:52:22]     "pilotErrorCode": 0,
[2025-11-21 20:52:22]     "pilotErrorDiag": "",
[2025-11-21 20:52:22]  *** Listing of results directory ***
[2025-11-21 20:52:22] total 1336644
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 20:52:22] -rwx------. 1 boinc boinc     36292 Nov 18 16:23 runpilot2-wrapper.sh
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:23 queuedata.json
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 20:52:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:23 run_atlas
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:23 job.xml
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc 410721527 Nov 20 19:23 EVNT.47493065._000059.pool.root.1
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc      6391 Nov 20 19:23 init_data.xml
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:23 start_atlas.sh
[2025-11-21 20:52:22] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:23 shared
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc    590092 Nov 20 19:23 input.tar.gz
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:23 boinc_lockfile
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc      2771 Nov 20 19:23 pandaJob.out
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc    989440 Nov 20 19:23 agis_schedconf.cvmfs.json
[2025-11-21 20:52:22] drwx------. 5 boinc boinc      4096 Nov 20 19:23 pilot3
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc       533 Nov 21 20:31 boinc_task_state.xml
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc 924497258 Nov 21 20:49 HITS.47493068._000588.pool.root.1
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc      1035 Nov 21 20:50 memory_monitor_summary.json
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc   1526164 Nov 21 20:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc   2565793 Nov 21 20:50 log.47493068._000588.job.log.tgz.1
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc        95 Nov 21 20:51 pilot_heartbeat.json
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc      8628 Nov 21 20:51 heartbeat.json
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc      8192 Nov 21 20:52 boinc_mmap_file
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc        29 Nov 21 20:52 wrapper_checkpoint.txt
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc      5142 Nov 21 20:52 pilotlog.txt
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc  12227384 Nov 21 20:52 log.47493068._000588.job.log.1
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc       353 Nov 21 20:52 output.list
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc       620 Nov 21 20:52 runtime_log
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc  14817280 Nov 21 20:52 result.tar.gz
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc      8703 Nov 21 20:52 runtime_log.err
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc       662 Nov 21 20:52 DOFNDmTjcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiJFKDmFd4uFm.diag
[2025-11-21 20:52:22] -rw-r--r--. 1 boinc boinc     20606 Nov 21 20:52 stderr.txt
[2025-11-21 20:52:22] HITS file was successfully produced:
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc 924497258 Nov 21 20:49 shared/HITS.pool.root.1
[2025-11-21 20:52:22]  *** Contents of shared directory: ***
[2025-11-21 20:52:22] total 1318996
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc 410721527 Nov 20 19:23 ATLAS.root_0
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:23 start_atlas.sh
[2025-11-21 20:52:22] -rw-r--r--. 2 boinc boinc    590092 Nov 20 19:23 input.tar.gz
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc 924497258 Nov 21 20:49 HITS.pool.root.1
[2025-11-21 20:52:22] -rw-------. 1 boinc boinc  14817280 Nov 21 20:52 result.tar.gz
20:52:23 (13951): run_atlas exited; CPU time 341738.629341
20:52:23 (13951): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN