Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:56 (32273): wrapper (7.7.26015): starting
13:31:56 (32273): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 13:31:56] Arguments: --nthreads 8
[2025-11-21 13:31:56] Threads: 8
[2025-11-21 13:31:56] Checking for CVMFS
[2025-11-21 13:31:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 13:31:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 13:31:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 13:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 13:31:57] 2.11.2.0 27391 80526 89532 153125 0 228 18276024 25165824 4053 130560 5 22578360 99.878 12697046 1683 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 13:31:57] CVMFS is ok
[2025-11-21 13:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 13:31:57] Checking for apptainer binary...
[2025-11-21 13:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 13:31:57] Running /usr/bin/apptainer --version
[2025-11-21 13:31:57] apptainer version 1.3.2-1.el7
[2025-11-21 13:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 13:31:58] cg-vwn417.simple-grid.lan
[2025-11-21 13:31:58] apptainer works
[2025-11-21 13:31:58] Set ATHENA_PROC_NUMBER=8
[2025-11-21 13:31:58] Set ATHENA_CORE_NUMBER=8
[2025-11-21 13:31:58] Starting ATLAS job with PandaID=6891488522
[2025-11-21 13:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 14:36:07]  *** The last 200 lines of the pilot log: ***
[2025-11-22 14:36:07] 2025-11-22 13:34:50,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:36:07] 2025-11-22 13:34:51,668 | INFO     | time since job start (90153s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:34:52,642 | INFO     | monitor loop #6000: job 0:6891488522 is in state 'finished'
[2025-11-22 14:36:07] 2025-11-22 13:34:52,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:36:07] 2025-11-22 13:34:53,675 | INFO     | time since job start (90155s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:34:55,147 | INFO     | monitor loop #6001: job 0:6891488522 is in state 'finished'
[2025-11-22 14:36:07] 2025-11-22 13:34:55,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:36:07] 2025-11-22 13:34:55,689 | INFO     | time since job start (90157s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:34:57,652 | INFO     | monitor loop #6002: job 0:6891488522 is in state 'finished'
[2025-11-22 14:36:07] 2025-11-22 13:34:57,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:36:07] 2025-11-22 13:34:57,696 | INFO     | time since job start (90159s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:34:59,709 | INFO     | time since job start (90161s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:35:00,162 | INFO     | monitor loop #6003: job 0:6891488522 is in state 'finished'
[2025-11-22 14:36:07] 2025-11-22 13:35:00,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:36:07] 2025-11-22 13:35:01,718 | INFO     | time since job start (90163s) is within the limit (172800.0s)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,280 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 14:36:07] 2025-11-22 13:35:02,281 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 14:36:07] 2025-11-22 13:35:02,283 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891488522/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,284 | INFO     | extracted standard info from prmon json
[2025-11-22 14:36:07] 2025-11-22 13:35:02,284 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:36:07] 2025-11-22 13:35:02,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:36:07] 2025-11-22 13:35:02,319 | INFO     | fitting pss+swap vs Time
[2025-11-22 14:36:07] 2025-11-22 13:35:02,321 | INFO     | sum of square deviations: 997094803744.3912
[2025-11-22 14:36:07] 2025-11-22 13:35:02,434 | INFO     | sum of deviations: 1868598243195.051
[2025-11-22 14:36:07] 2025-11-22 13:35:02,435 | INFO     | mean x: 1763773408.813008
[2025-11-22 14:36:07] 2025-11-22 13:35:02,435 | INFO     | mean y: 2870389.351626016
[2025-11-22 14:36:07] 2025-11-22 13:35:02,435 | INFO     | intersect: -3302516300.7860346
[2025-11-22 14:36:07] 2025-11-22 13:35:02,437 | INFO     | chi2: 15.382692367986095
[2025-11-22 14:36:07] 2025-11-22 13:35:02,439 | INFO     | sum of square deviations: 986996582220.7415
[2025-11-22 14:36:07] 2025-11-22 13:35:02,506 | INFO     | sum of deviations: 2351018703706.519
[2025-11-22 14:36:07] 2025-11-22 13:35:02,507 | INFO     | mean x: 1763773256.317471
[2025-11-22 14:36:07] 2025-11-22 13:35:02,507 | INFO     | mean y: 2877673.2794017675
[2025-11-22 14:36:07] 2025-11-22 13:35:02,507 | INFO     | intersect: -4198417436.9526286
[2025-11-22 14:36:07] 2025-11-22 13:35:02,509 | INFO     | chi2: 12.31173058484877
[2025-11-22 14:36:07] 2025-11-22 13:35:02,509 | INFO     | current chi2=12.31173058484877 (change=19.96374698052534 %)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,509 | INFO     | right removable region: 1470
[2025-11-22 14:36:07] 2025-11-22 13:35:02,511 | INFO     | sum of square deviations: 986995400040.7423
[2025-11-22 14:36:07] 2025-11-22 13:35:02,572 | INFO     | sum of deviations: 1373119285099.8618
[2025-11-22 14:36:07] 2025-11-22 13:35:02,573 | INFO     | mean x: 1763773561.317471
[2025-11-22 14:36:07] 2025-11-22 13:35:02,575 | INFO     | mean y: 2877868.993881713
[2025-11-22 14:36:07] 2025-11-22 13:35:02,575 | INFO     | intersect: -2450904075.1715217
[2025-11-22 14:36:07] 2025-11-22 13:35:02,577 | INFO     | chi2: 12.46663601107405
[2025-11-22 14:36:07] 2025-11-22 13:35:02,577 | INFO     | current chi2=12.46663601107405 (change=18.95673583761473 %)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,577 | INFO     | left removable region: 10
[2025-11-22 14:36:07] 2025-11-22 13:35:02,579 | INFO     | sum of square deviations: 965018998287.1094
[2025-11-22 14:36:07] 2025-11-22 13:35:02,639 | INFO     | sum of deviations: 1788553606216.1746
[2025-11-22 14:36:07] 2025-11-22 13:35:02,640 | INFO     | mean x: 1763773530.8246574
[2025-11-22 14:36:07] 2025-11-22 13:35:02,640 | INFO     | mean y: 2889348.7116438355
[2025-11-22 14:36:07] 2025-11-22 13:35:02,640 | INFO     | intersect: -3266065474.66949
[2025-11-22 14:36:07] 2025-11-22 13:35:02,642 | INFO     | chi2: 8.36162349718612
[2025-11-22 14:36:07] 2025-11-22 13:35:02,642 | INFO     | current memory leak: 1.85 B/s (using 1460 data points, chi2=8.36)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,644 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,644 | INFO     | ..............................
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . Timing measurements:
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . get job = 0 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . initial setup = 2 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . payload setup = 27 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . stage-in = 0 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . payload execution = 90006 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . stage-out = 5 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | . log creation = 2 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,645 | INFO     | ..............................
[2025-11-22 14:36:07] 2025-11-22 13:35:02,840 | INFO     | 
[2025-11-22 14:36:07] 2025-11-22 13:35:02,840 | INFO     | job summary report
[2025-11-22 14:36:07] 2025-11-22 13:35:02,840 | INFO     | --------------------------------------------------
[2025-11-22 14:36:07] 2025-11-22 13:35:02,840 | INFO     | PanDA job id: 6891488522
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | task id: 47493068
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | errors: (none)
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | pilot state: finished 
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | transexitcode: 0
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | exeerrorcode: 0
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | exeerrordiag: 
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | exitcode: 0
[2025-11-22 14:36:07] 2025-11-22 13:35:02,841 | INFO     | exitmsg: OK
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | cpuconsumptiontime: 335135 s
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | nevents: 1000
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | neventsw: 0
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | pid: 14458
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | pgrp: 14458
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | corecount: 8
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | event service: False
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | sizes: {0: 2298561, 1: 2298816, 2: 2298816, 11: 2299106, 12: 2299134, 90035: 2361447, 90041: 2370497, 90140: 2370687}
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | --------------------------------------------------
[2025-11-22 14:36:07] 2025-11-22 13:35:02,842 | INFO     | 
[2025-11-22 14:36:07] 2025-11-22 13:35:02,843 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-22 14:36:07] 2025-11-22 13:35:03,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 14:36:07] 2025-11-22 13:35:03,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 14:36:07] 2025-11-22 13:35:03,399 | INFO     | job 6891488522 has completed (purged errors)
[2025-11-22 14:36:07] 2025-11-22 13:35:03,399 | INFO     | overall cleanup function is called
[2025-11-22 14:36:07] 2025-11-22 13:35:04,435 | INFO     | --- collectZombieJob: --- 10, [14458]
[2025-11-22 14:36:07] 2025-11-22 13:35:04,435 | INFO     | zombie collector waiting for pid 14458
[2025-11-22 14:36:07] 2025-11-22 13:35:04,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 14:36:07] 2025-11-22 13:35:04,436 | INFO     | collected zombie processes
[2025-11-22 14:36:07] 2025-11-22 13:35:04,436 | INFO     | will attempt to kill all subprocesses of pid=14458
[2025-11-22 14:36:07] 2025-11-22 13:35:04,564 | INFO     | process IDs to be killed: [14458] (in reverse order)
[2025-11-22 14:36:07] 2025-11-22 13:35:05,567 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 14:36:07] 2025-11-22 13:35:05,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 14:36:07] 2025-11-22 13:35:05,571 | INFO     | did not find any defunct processes belonging to 14458
[2025-11-22 14:36:07] 2025-11-22 13:35:05,574 | INFO     | did not find any defunct processes belonging to 14458
[2025-11-22 14:36:07] 2025-11-22 13:35:05,587 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 14:36:07] 2025-11-22 13:35:05,587 | INFO     | ready for new job
[2025-11-22 14:36:07] 2025-11-22 13:35:05,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 14:36:07] 2025-11-22 13:35:05,594 | INFO     | ***************************************
[2025-11-22 14:36:07] 2025-11-22 13:35:05,595 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 14:36:07] 2025-11-22 13:35:05,595 | INFO     | ***************************************
[2025-11-22 14:36:07] 2025-11-22 13:35:05,595 | INFO     | 
[2025-11-22 14:36:07] 2025-11-22 13:35:05,595 | INFO     | pilot is running in a VM
[2025-11-22 14:36:07] 2025-11-22 13:35:05,596 | INFO     | architecture information:
[2025-11-22 14:36:07] 2025-11-22 13:35:05,596 | INFO     | executing command: cat /etc/os-release
[2025-11-22 14:36:07] 2025-11-22 13:35:05,867 | INFO     | cat /etc/os-release:
[2025-11-22 14:36:07] NAME="CentOS Linux"
[2025-11-22 14:36:07] VERSION="7 (Core)"
[2025-11-22 14:36:07] ID="centos"
[2025-11-22 14:36:07] ID_LIKE="rhel fedora"
[2025-11-22 14:36:07] VERSION_ID="7"
[2025-11-22 14:36:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 14:36:07] ANSI_COLOR="0;31"
[2025-11-22 14:36:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 14:36:07] HOME_URL="https://www.centos.org/"
[2025-11-22 14:36:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 14:36:07] 
[2025-11-22 14:36:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 14:36:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 14:36:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 14:36:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 14:36:07] 
[2025-11-22 14:36:07] 2025-11-22 13:35:05,868 | INFO     | ***************************************
[2025-11-22 14:36:07] 2025-11-22 13:35:06,371 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-22 14:36:07] 2025-11-22 13:35:06,680 | INFO     | sufficient remaining disk space (494819868672 B)
[2025-11-22 14:36:07] 2025-11-22 13:35:06,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 14:36:07] 2025-11-22 13:35:06,681 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 14:36:07] 2025-11-22 13:35:06,681 | INFO     | update_server=False
[2025-11-22 14:36:07] 2025-11-22 13:35:06,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 14:36:07] 2025-11-22 13:35:06,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:36:07] 2025-11-22 13:35:06,682 | INFO     | aborting loop
[2025-11-22 14:36:07] 2025-11-22 13:35:06,950 | INFO     | all data control threads have been joined
[2025-11-22 14:36:07] 2025-11-22 13:35:07,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 14:36:07] 2025-11-22 13:35:07,687 | INFO     | [job] retrieve thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:07,688 | INFO     | [job] job monitor thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:07,706 | INFO     | all job control threads have been joined
[2025-11-22 14:36:07] 2025-11-22 13:35:07,721 | INFO     | all payload control threads have been joined
[2025-11-22 14:36:07] 2025-11-22 13:35:07,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:36:07] 2025-11-22 13:35:07,956 | INFO     | [data] control thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,153 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,171 | INFO     | [payload] validate_post thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,247 | INFO     | [data] copytool_in thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,287 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,328 | INFO     | [payload] failed_post thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,438 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,455 | INFO     | [job] validate thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,712 | INFO     | [job] control thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,727 | INFO     | [payload] control thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:08,801 | INFO     | [job] queue monitor thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:09,052 | INFO     | [data] copytool_out thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:09,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 14:36:07] 2025-11-22 13:35:13,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:17,270 | INFO     | job.realtimelogging is not enabled
[2025-11-22 14:36:07] 2025-11-22 13:35:18,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 14:36:07] 2025-11-22 13:35:34,938 | INFO     | PID=3686 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 14:36:07] 2025-11-22 13:35:34,938 | INFO     | .. there are 9 such processes running
[2025-11-22 14:36:07] 2025-11-22 13:35:34,939 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 14:36:07] 2025-11-22 13:35:34,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 14:36:07] 2025-11-22 13:35:34,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 14:36:07] 2025-11-22 13:35:56,241 | INFO     | [monitor] cgroup control has ended
[2025-11-22 14:36:07] 2025-11-22 13:35:57,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428384569152)>', '<ExcThread(monitor, started 140427638335232)>']
[2025-11-22 14:36:07] 2025-11-22 13:35:58,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 14:36:07] 2025-11-22 13:35:58,078 | INFO     | [monitor] control thread has ended
[2025-11-22 14:36:07] 2025-11-22 13:36:02,799 | INFO     | all workflow threads have been joined
[2025-11-22 14:36:07] 2025-11-22 13:36:02,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 14:36:07] 2025-11-22 13:36:02,799 | INFO     | traces error code: 0
[2025-11-22 14:36:07] 2025-11-22 13:36:02,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 14:36:07] 2025-11-22 13:36:03,248 [wrapper] ==== pilot stdout END ====
[2025-11-22 14:36:07] 2025-11-22 13:36:03,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 14:36:07] 2025-11-22 13:36:03,436 [wrapper] pilotpid: 3686
[2025-11-22 14:36:07] 2025-11-22 13:36:03,538 [wrapper] Pilot exit status: 0
[2025-11-22 14:36:07] 2025-11-22 13:36:03,939 [wrapper] pandaids: 6891488522
[2025-11-22 14:36:07] 2025-11-22 13:36:04,928 [wrapper] cleanup supervisor_pilot 29876 3687
[2025-11-22 14:36:07] 2025-11-22 13:36:04,968 [wrapper] Test setup, not cleaning
[2025-11-22 14:36:07] 2025-11-22 13:36:05,016 [wrapper] apfmon messages muted
[2025-11-22 14:36:07] 2025-11-22 13:36:05,103 [wrapper] ==== wrapper stdout END ====
[2025-11-22 14:36:07] 2025-11-22 13:36:05,218 [wrapper] ==== wrapper stderr END ====
[2025-11-22 14:36:07]  *** Error codes and diagnostics ***
[2025-11-22 14:36:07]     "exeErrorCode": 0,
[2025-11-22 14:36:07]     "exeErrorDiag": "",
[2025-11-22 14:36:07]     "pilotErrorCode": 0,
[2025-11-22 14:36:07]     "pilotErrorDiag": "",
[2025-11-22 14:36:07]  *** Listing of results directory ***
[2025-11-22 14:36:07] total 1325572
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc    576529 Nov 18 13:21 pilot3.tar.gz
[2025-11-22 14:36:07] -rwx------. 1 boinc boinc     36292 Nov 18 14:13 runpilot2-wrapper.sh
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc      5112 Nov 18 14:13 queuedata.json
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc       100 Nov 21 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 14:36:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 13:31 run_atlas
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc       105 Nov 21 13:31 job.xml
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc 408325447 Nov 21 13:31 EVNT.47493065._000009.pool.root.1
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc      6390 Nov 21 13:31 init_data.xml
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc     15120 Nov 21 13:31 start_atlas.sh
[2025-11-22 14:36:07] drwxrwx--x. 2 boinc boinc        68 Nov 21 13:31 shared
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc    590091 Nov 21 13:31 input.tar.gz
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc         0 Nov 21 13:31 boinc_lockfile
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc      2769 Nov 21 13:31 pandaJob.out
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc    989817 Nov 21 13:32 agis_schedconf.cvmfs.json
[2025-11-22 14:36:07] drwx------. 5 boinc boinc      4096 Nov 21 13:32 pilot3
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc       533 Nov 22 14:11 boinc_task_state.xml
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc 916046173 Nov 22 14:32 HITS.47493068._000023.pool.root.1
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc      1032 Nov 22 14:33 memory_monitor_summary.json
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc   1526164 Nov 22 14:33 agis_ddmendpoints.agis.ALL.json
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc   2549181 Nov 22 14:33 log.47493068._000023.job.log.tgz.1
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc      7950 Nov 22 14:35 heartbeat.json
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc        95 Nov 22 14:35 pilot_heartbeat.json
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc      4955 Nov 22 14:36 pilotlog.txt
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc  12007731 Nov 22 14:36 log.47493068._000023.job.log.1
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc        29 Nov 22 14:36 wrapper_checkpoint.txt
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc      8192 Nov 22 14:36 boinc_mmap_file
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc       353 Nov 22 14:36 output.list
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc       620 Nov 22 14:36 runtime_log
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc  14571520 Nov 22 14:36 result.tar.gz
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc      8703 Nov 22 14:36 runtime_log.err
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc       662 Nov 22 14:36 Og9MDmGhaf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBCFKDmG8Mvan.diag
[2025-11-22 14:36:07] -rw-r--r--. 1 boinc boinc     21299 Nov 22 14:36 stderr.txt
[2025-11-22 14:36:07] HITS file was successfully produced:
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc 916046173 Nov 22 14:32 shared/HITS.pool.root.1
[2025-11-22 14:36:07]  *** Contents of shared directory: ***
[2025-11-22 14:36:07] total 1308164
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc 408325447 Nov 21 13:31 ATLAS.root_0
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc     15120 Nov 21 13:31 start_atlas.sh
[2025-11-22 14:36:07] -rw-r--r--. 2 boinc boinc    590091 Nov 21 13:31 input.tar.gz
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc 916046173 Nov 22 14:32 HITS.pool.root.1
[2025-11-22 14:36:07] -rw-------. 1 boinc boinc  14571520 Nov 22 14:36 result.tar.gz
14:36:09 (32273): run_atlas exited; CPU time 335640.599602
14:36:09 (32273): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN