Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:03 (22198): wrapper (7.7.26015): starting
11:37:03 (22198): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 11:37:03] Arguments: --nthreads 8
[2025-11-20 11:37:03] Threads: 8
[2025-11-20 11:37:03] Checking for CVMFS
[2025-11-20 11:37:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:37:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:37:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:37:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:37:05] 2.11.2.0 27391 78971 90716 153078 0 187 17277717 25165824 4623 130560 5 21646391 99.874 12336528 1671 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 11:37:05] CVMFS is ok
[2025-11-20 11:37:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:37:05] Checking for apptainer binary...
[2025-11-20 11:37:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 11:37:05] Running /usr/bin/apptainer --version
[2025-11-20 11:37:05] apptainer version 1.3.2-1.el7
[2025-11-20 11:37:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:37:08] cg-vwn417.simple-grid.lan
[2025-11-20 11:37:08] apptainer works
[2025-11-20 11:37:08] Set ATHENA_PROC_NUMBER=8
[2025-11-20 11:37:08] Set ATHENA_CORE_NUMBER=8
[2025-11-20 11:37:08] Starting ATLAS job with PandaID=6891104869
[2025-11-20 11:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 13:31:48]  *** The last 200 lines of the pilot log: ***
[2025-11-21 13:31:48] 2025-11-21 12:30:52,166 | INFO     | time since job start (92992s) is within the limit (172800.0s)
[2025-11-21 13:31:48] 2025-11-21 12:30:53,340 | INFO     | PID=25960 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 13:31:48] 2025-11-21 12:30:53,340 | INFO     | .. there are 8 such processes running
[2025-11-21 13:31:48] 2025-11-21 12:30:53,579 | INFO     | monitor loop #6242: job 0:6891104869 is in state 'finished'
[2025-11-21 13:31:48] 2025-11-21 12:30:53,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:31:48] 2025-11-21 12:30:54,341 | INFO     | time since job start (92994s) is within the limit (172800.0s)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,083 | INFO     | monitor loop #6243: job 0:6891104869 is in state 'finished'
[2025-11-21 13:31:48] 2025-11-21 12:30:56,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,347 | INFO     | time since job start (92996s) is within the limit (172800.0s)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,485 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 13:31:48] 2025-11-21 12:30:56,486 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 13:31:48] 2025-11-21 12:30:56,488 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891104869/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,489 | INFO     | extracted standard info from prmon json
[2025-11-21 13:31:48] 2025-11-21 12:30:56,489 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 13:31:48] 2025-11-21 12:30:56,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 13:31:48] 2025-11-21 12:30:56,519 | INFO     | fitting pss+swap vs Time
[2025-11-21 13:31:48] 2025-11-21 12:30:56,522 | INFO     | sum of square deviations: 1080377438035.4541
[2025-11-21 13:31:48] 2025-11-21 12:30:56,585 | INFO     | sum of deviations: 4300051473262.15
[2025-11-21 13:31:48] 2025-11-21 12:30:56,585 | INFO     | mean x: 1763681996.7110817
[2025-11-21 13:31:48] 2025-11-21 12:30:56,586 | INFO     | mean y: 2866337.7948548812
[2025-11-21 13:31:48] 2025-11-21 12:30:56,586 | INFO     | intersect: -7016831687.474847
[2025-11-21 13:31:48] 2025-11-21 12:30:56,588 | INFO     | chi2: 16.698961123734538
[2025-11-21 13:31:48] 2025-11-21 12:30:56,590 | INFO     | sum of square deviations: 1069723454053.0955
[2025-11-21 13:31:48] 2025-11-21 12:30:56,653 | INFO     | sum of deviations: 4825075474953.021
[2025-11-21 13:31:48] 2025-11-21 12:30:56,653 | INFO     | mean x: 1763681844.2150893
[2025-11-21 13:31:48] 2025-11-21 12:30:56,653 | INFO     | mean y: 2873852.393778954
[2025-11-21 13:31:48] 2025-11-21 12:30:56,654 | INFO     | intersect: -7952357922.6026745
[2025-11-21 13:31:48] 2025-11-21 12:30:56,655 | INFO     | chi2: 13.360917027763117
[2025-11-21 13:31:48] 2025-11-21 12:30:56,656 | INFO     | current chi2=13.360917027763117 (change=19.98953151179565 %)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,656 | INFO     | right removable region: 1510
[2025-11-21 13:31:48] 2025-11-21 12:30:56,658 | INFO     | sum of square deviations: 1069722334093.0958
[2025-11-21 13:31:48] 2025-11-21 12:30:56,722 | INFO     | sum of deviations: 3682795301203.4644
[2025-11-21 13:31:48] 2025-11-21 12:30:56,723 | INFO     | mean x: 1763682149.2150893
[2025-11-21 13:31:48] 2025-11-21 12:30:56,723 | INFO     | mean y: 2875171.5585704832
[2025-11-21 13:31:48] 2025-11-21 12:30:56,723 | INFO     | intersect: -6069055950.130515
[2025-11-21 13:31:48] 2025-11-21 12:30:56,725 | INFO     | chi2: 12.324881616772428
[2025-11-21 13:31:48] 2025-11-21 12:30:56,725 | INFO     | current chi2=12.324881616772428 (change=26.193722319319317 %)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,728 | INFO     | sum of square deviations: 1059137510538.1893
[2025-11-21 13:31:48] 2025-11-21 12:30:56,799 | INFO     | sum of deviations: 3157021056362.776
[2025-11-21 13:31:48] 2025-11-21 12:30:56,800 | INFO     | mean x: 1763682301.7191236
[2025-11-21 13:31:48] 2025-11-21 12:30:56,800 | INFO     | mean y: 2882746.4037184594
[2025-11-21 13:31:48] 2025-11-21 12:30:56,800 | INFO     | intersect: -5254208148.6513815
[2025-11-21 13:31:48] 2025-11-21 12:30:56,802 | INFO     | chi2: 9.266678819257356
[2025-11-21 13:31:48] 2025-11-21 12:30:56,802 | INFO     | current chi2=9.266678819257356 (change=24.8132427767362 %)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,803 | INFO     | left removable region: 20
[2025-11-21 13:31:48] 2025-11-21 12:30:56,805 | INFO     | sum of square deviations: 1025737541850.9171
[2025-11-21 13:31:48] 2025-11-21 12:30:56,875 | INFO     | sum of deviations: 3302032724863.463
[2025-11-21 13:31:48] 2025-11-21 12:30:56,875 | INFO     | mean x: 1763682423.728188
[2025-11-21 13:31:48] 2025-11-21 12:30:56,875 | INFO     | mean y: 2899133.9295302015
[2025-11-21 13:31:48] 2025-11-21 12:30:56,876 | INFO     | intersect: -5674710236.697776
[2025-11-21 13:31:48] 2025-11-21 12:30:56,877 | INFO     | chi2: 3.493349731017371
[2025-11-21 13:31:48] 2025-11-21 12:30:56,878 | INFO     | current memory leak: 3.22 B/s (using 1490 data points, chi2=3.49)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,881 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 13:31:48] 2025-11-21 12:30:56,881 | INFO     | ..............................
[2025-11-21 13:31:48] 2025-11-21 12:30:56,881 | INFO     | . Timing measurements:
[2025-11-21 13:31:48] 2025-11-21 12:30:56,881 | INFO     | . get job = 0 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . initial setup = 11 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . payload setup = 168 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . stage-in = 0 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . payload execution = 92601 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . stage-out = 4 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | . log creation = 1 s
[2025-11-21 13:31:48] 2025-11-21 12:30:56,882 | INFO     | ..............................
[2025-11-21 13:31:48] 2025-11-21 12:30:57,007 | INFO     | 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,007 | INFO     | job summary report
[2025-11-21 13:31:48] 2025-11-21 12:30:57,007 | INFO     | --------------------------------------------------
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | PanDA job id: 6891104869
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | task id: 47483661
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | errors: (none)
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | pilot state: finished 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | transexitcode: 0
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | exeerrorcode: 0
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | exeerrordiag: 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | exitcode: 0
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | exitmsg: OK
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | cpuconsumptiontime: 342583 s
[2025-11-21 13:31:48] 2025-11-21 12:30:57,008 | INFO     | nevents: 1000
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | neventsw: 0
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | pid: 32501
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | pgrp: 32501
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | corecount: 8
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | event service: False
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | sizes: {0: 2296973, 1: 2297228, 12: 2297228, 23: 2297256, 34: 2297284, 44: 2297312, 55: 2297468, 66: 2297496, 76: 2297524, 87: 2297580, 98: 2298178, 108: 2298178, 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | --------------------------------------------------
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | 
[2025-11-21 13:31:48] 2025-11-21 12:30:57,009 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-21 13:31:48] 2025-11-21 12:30:57,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 13:31:48] 2025-11-21 12:30:57,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 13:31:48] 2025-11-21 12:30:57,046 | INFO     | job 6891104869 has completed (purged errors)
[2025-11-21 13:31:48] 2025-11-21 12:30:57,046 | INFO     | overall cleanup function is called
[2025-11-21 13:31:48] 2025-11-21 12:30:58,064 | INFO     | --- collectZombieJob: --- 10, [32501]
[2025-11-21 13:31:48] 2025-11-21 12:30:58,064 | INFO     | zombie collector waiting for pid 32501
[2025-11-21 13:31:48] 2025-11-21 12:30:58,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 13:31:48] 2025-11-21 12:30:58,064 | INFO     | collected zombie processes
[2025-11-21 13:31:48] 2025-11-21 12:30:58,064 | INFO     | will attempt to kill all subprocesses of pid=32501
[2025-11-21 13:31:48] 2025-11-21 12:30:58,211 | INFO     | process IDs to be killed: [32501] (in reverse order)
[2025-11-21 13:31:48] 2025-11-21 12:30:58,358 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 13:31:48] 2025-11-21 12:30:58,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 13:31:48] 2025-11-21 12:30:58,362 | INFO     | did not find any defunct processes belonging to 32501
[2025-11-21 13:31:48] 2025-11-21 12:30:58,365 | INFO     | did not find any defunct processes belonging to 32501
[2025-11-21 13:31:48] 2025-11-21 12:30:58,367 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 13:31:48] 2025-11-21 12:30:58,368 | INFO     | ready for new job
[2025-11-21 13:31:48] 2025-11-21 12:30:58,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 13:31:48] 2025-11-21 12:30:58,375 | INFO     | ***************************************
[2025-11-21 13:31:48] 2025-11-21 12:30:58,375 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 13:31:48] 2025-11-21 12:30:58,375 | INFO     | ***************************************
[2025-11-21 13:31:48] 2025-11-21 12:30:58,376 | INFO     | 
[2025-11-21 13:31:48] 2025-11-21 12:30:58,376 | INFO     | pilot is running in a VM
[2025-11-21 13:31:48] 2025-11-21 12:30:58,376 | INFO     | architecture information:
[2025-11-21 13:31:48] 2025-11-21 12:30:58,388 | INFO     | executing command: cat /etc/os-release
[2025-11-21 13:31:48] 2025-11-21 12:30:58,414 | INFO     | cat /etc/os-release:
[2025-11-21 13:31:48] NAME="CentOS Linux"
[2025-11-21 13:31:48] VERSION="7 (Core)"
[2025-11-21 13:31:48] ID="centos"
[2025-11-21 13:31:48] ID_LIKE="rhel fedora"
[2025-11-21 13:31:48] VERSION_ID="7"
[2025-11-21 13:31:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 13:31:48] ANSI_COLOR="0;31"
[2025-11-21 13:31:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 13:31:48] HOME_URL="https://www.centos.org/"
[2025-11-21 13:31:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 13:31:48] 
[2025-11-21 13:31:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 13:31:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 13:31:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 13:31:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 13:31:48] 
[2025-11-21 13:31:48] 2025-11-21 12:30:58,414 | INFO     | ***************************************
[2025-11-21 13:31:48] 2025-11-21 12:30:58,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-21 13:31:48] 2025-11-21 12:30:58,959 | INFO     | sufficient remaining disk space (495048458240 B)
[2025-11-21 13:31:48] 2025-11-21 12:30:58,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 13:31:48] 2025-11-21 12:30:58,959 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 13:31:48] 2025-11-21 12:30:58,960 | INFO     | update_server=False
[2025-11-21 13:31:48] 2025-11-21 12:30:58,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 13:31:48] 2025-11-21 12:30:58,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:31:48] 2025-11-21 12:30:59,083 | INFO     | all job control threads have been joined
[2025-11-21 13:31:48] 2025-11-21 12:30:59,215 | INFO     | all payload control threads have been joined
[2025-11-21 13:31:48] 2025-11-21 12:30:59,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 13:31:48] 2025-11-21 12:30:59,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:31:48] 2025-11-21 12:30:59,616 | INFO     | aborting loop
[2025-11-21 13:31:48] 2025-11-21 12:30:59,965 | INFO     | [job] retrieve thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:30:59,966 | INFO     | [job] queue monitor thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,020 | INFO     | all data control threads have been joined
[2025-11-21 13:31:48] 2025-11-21 12:31:00,089 | INFO     | [job] control thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,217 | INFO     | [payload] control thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 13:31:48] 2025-11-21 12:31:00,296 | INFO     | [job] validate thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,521 | INFO     | [payload] failed_post thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,621 | INFO     | [job] job monitor thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,796 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:00,987 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:01,018 | INFO     | [data] copytool_in thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:01,026 | INFO     | [data] control thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:01,026 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:01,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:01,272 | INFO     | [payload] validate_post thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:02,278 | INFO     | [data] copytool_out thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:03,589 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 13:31:48] 2025-11-21 12:31:29,592 | INFO     | PID=25960 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 13:31:48] 2025-11-21 12:31:29,592 | INFO     | .. there are 8 such processes running
[2025-11-21 13:31:48] 2025-11-21 12:31:29,594 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 13:31:48] 2025-11-21 12:31:29,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 13:31:48] 2025-11-21 12:31:29,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 13:31:48] 2025-11-21 12:31:42,079 | INFO     | [monitor] cgroup control has ended
[2025-11-21 13:31:48] 2025-11-21 12:31:42,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059379996480)>', '<ExcThread(monitor, started 140058799625984)>']
[2025-11-21 13:31:48] 2025-11-21 12:31:43,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 13:31:48] 2025-11-21 12:31:43,668 | INFO     | [monitor] control thread has ended
[2025-11-21 13:31:48] 2025-11-21 12:31:47,903 | INFO     | all workflow threads have been joined
[2025-11-21 13:31:48] 2025-11-21 12:31:47,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 13:31:48] 2025-11-21 12:31:47,904 | INFO     | traces error code: 0
[2025-11-21 13:31:48] 2025-11-21 12:31:47,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 13:31:48] 2025-11-21 12:31:48,155 [wrapper] ==== pilot stdout END ====
[2025-11-21 13:31:48] 2025-11-21 12:31:48,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 13:31:48] 2025-11-21 12:31:48,176 [wrapper] pilotpid: 25960
[2025-11-21 13:31:48] 2025-11-21 12:31:48,183 [wrapper] Pilot exit status: 0
[2025-11-21 13:31:48] 2025-11-21 12:31:48,211 [wrapper] pandaids: 6891104869
[2025-11-21 13:31:48] 2025-11-21 12:31:48,270 [wrapper] cleanup supervisor_pilot 26609 25961
[2025-11-21 13:31:48] 2025-11-21 12:31:48,274 [wrapper] Test setup, not cleaning
[2025-11-21 13:31:48] 2025-11-21 12:31:48,278 [wrapper] apfmon messages muted
[2025-11-21 13:31:48] 2025-11-21 12:31:48,282 [wrapper] ==== wrapper stdout END ====
[2025-11-21 13:31:48] 2025-11-21 12:31:48,288 [wrapper] ==== wrapper stderr END ====
[2025-11-21 13:31:48]  *** Error codes and diagnostics ***
[2025-11-21 13:31:48]     "exeErrorCode": 0,
[2025-11-21 13:31:48]     "exeErrorDiag": "",
[2025-11-21 13:31:48]     "pilotErrorCode": 0,
[2025-11-21 13:31:48]     "pilotErrorDiag": "",
[2025-11-21 13:31:48]  *** Listing of results directory ***
[2025-11-21 13:31:48] total 1337644
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc    576529 Nov 18 07:54 pilot3.tar.gz
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc      5112 Nov 18 07:58 queuedata.json
[2025-11-21 13:31:48] -rwx------. 1 boinc boinc     36292 Nov 18 07:59 runpilot2-wrapper.sh
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc       100 Nov 20 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 13:31:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 11:37 run_atlas
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc       105 Nov 20 11:37 job.xml
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc      6390 Nov 20 11:37 init_data.xml
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc 411156688 Nov 20 11:37 EVNT.47483658._000235.pool.root.1
[2025-11-21 13:31:48] drwxrwx--x. 2 boinc boinc        68 Nov 20 11:37 shared
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc    590102 Nov 20 11:37 input.tar.gz
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc     15120 Nov 20 11:37 start_atlas.sh
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc         0 Nov 20 11:37 boinc_lockfile
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc      2773 Nov 20 11:37 pandaJob.out
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc    989443 Nov 20 11:40 agis_schedconf.cvmfs.json
[2025-11-21 13:31:48] drwx------. 5 boinc boinc      4096 Nov 20 11:41 pilot3
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc       533 Nov 21 13:12 boinc_task_state.xml
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc 924772564 Nov 21 13:29 HITS.47483661._002046.pool.root.1
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc      1035 Nov 21 13:30 memory_monitor_summary.json
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc   1526164 Nov 21 13:30 agis_ddmendpoints.agis.ALL.json
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc   2577025 Nov 21 13:30 log.47483661._002046.job.log.tgz.1
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc      8627 Nov 21 13:30 heartbeat.json
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc        95 Nov 21 13:31 pilot_heartbeat.json
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc      8192 Nov 21 13:31 boinc_mmap_file
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc        29 Nov 21 13:31 wrapper_checkpoint.txt
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc      4884 Nov 21 13:31 pilotlog.txt
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc  12378055 Nov 21 13:31 log.47483661._002046.job.log.1
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc       353 Nov 21 13:31 output.list
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc       620 Nov 21 13:31 runtime_log
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc  14970880 Nov 21 13:31 result.tar.gz
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc       662 Nov 21 13:31 wdtMDmQrUf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ8qMDmpa426m.diag
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc      8703 Nov 21 13:31 runtime_log.err
[2025-11-21 13:31:48] -rw-r--r--. 1 boinc boinc     21290 Nov 21 13:31 stderr.txt
[2025-11-21 13:31:48] HITS file was successfully produced:
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc 924772564 Nov 21 13:29 shared/HITS.pool.root.1
[2025-11-21 13:31:48]  *** Contents of shared directory: ***
[2025-11-21 13:31:48] total 1319840
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc 411156688 Nov 20 11:37 ATLAS.root_0
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc    590102 Nov 20 11:37 input.tar.gz
[2025-11-21 13:31:48] -rw-r--r--. 2 boinc boinc     15120 Nov 20 11:37 start_atlas.sh
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc 924772564 Nov 21 13:29 HITS.pool.root.1
[2025-11-21 13:31:48] -rw-------. 1 boinc boinc  14970880 Nov 21 13:31 result.tar.gz
13:31:49 (22198): run_atlas exited; CPU time 343200.061582
13:31:49 (22198): called boinc_finish(0)

</stderr_txt>
]]>

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