Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
08:27:05 (807514): wrapper (7.7.26015): starting
08:27:05 (807514): wrapper: running run_atlas (--nthreads 8)
[2025-11-06 08:27:05] Arguments: --nthreads 8
[2025-11-06 08:27:05] Threads: 8
[2025-11-06 08:27:05] Checking for CVMFS
[2025-11-06 08:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 08:27:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 08:27:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 08:27:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 08:27:07] 2.13.3.0 744127 173 42328 152546 2 57 2610593 4096001 1838 130560 0 195570 97.639 330318 601 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-06 08:27:07] CVMFS is ok
[2025-11-06 08:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 08:27:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-06 08:27:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-06 08:27:07] Further information can be found at the LHC@home message board.
[2025-11-06 08:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 08:27:07] Checking for apptainer binary...
[2025-11-06 08:27:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 08:27:07] Running /usr/bin/apptainer --version
[2025-11-06 08:27:07] apptainer version 1.4.4
[2025-11-06 08:27:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 08:27:07] garage
[2025-11-06 08:27:07] apptainer works
[2025-11-06 08:27:07] Set ATHENA_PROC_NUMBER=8
[2025-11-06 08:27:07] Set ATHENA_CORE_NUMBER=8
[2025-11-06 08:27:07] Starting ATLAS job with PandaID=6874037365
[2025-11-06 08:27:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-06 21:15:43]  *** The last 200 lines of the pilot log: ***
[2025-11-06 21:15:43] 2025-11-07 04:15:05,226 | INFO     | time since job start (46065s) is within the limit (172800.0s)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,412 | INFO     | monitor loop #3431: job 0:6874037365 is in state 'finished'
[2025-11-06 21:15:43] 2025-11-07 04:15:06,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-06 21:15:43] 2025-11-07 04:15:06,488 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4275.544218749999
[2025-11-06 21:15:43] 2025-11-07 04:15:06,491 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6874037365/memory_monitor_summary.json (trf name=prmon)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,491 | INFO     | extracted standard info from prmon json
[2025-11-06 21:15:43] 2025-11-07 04:15:06,491 | INFO     | extracted standard memory fields from prmon json
[2025-11-06 21:15:43] 2025-11-07 04:15:06,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-06 21:15:43] 2025-11-07 04:15:06,497 | INFO     | fitting pss+swap vs Time
[2025-11-06 21:15:43] 2025-11-07 04:15:06,497 | INFO     | sum of square deviations: 133449981210.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,503 | INFO     | sum of deviations: 1051353985091.0006
[2025-11-06 21:15:43] 2025-11-07 04:15:06,503 | INFO     | mean x: 1762465859.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,503 | INFO     | mean y: 3539211.2993377484
[2025-11-06 21:15:43] 2025-11-07 04:15:06,503 | INFO     | intersect: -13881629506.188889
[2025-11-06 21:15:43] 2025-11-07 04:15:06,503 | INFO     | chi2: 3.913071440355448
[2025-11-06 21:15:43] 2025-11-07 04:15:06,504 | INFO     | sum of square deviations: 130816173687.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,509 | INFO     | sum of deviations: 1261888913560.9998
[2025-11-06 21:15:43] 2025-11-07 04:15:06,509 | INFO     | mean x: 1762465706.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,509 | INFO     | mean y: 3551383.9573333333
[2025-11-06 21:15:43] 2025-11-07 04:15:06,509 | INFO     | intersect: -16997679219.811049
[2025-11-06 21:15:43] 2025-11-07 04:15:06,510 | INFO     | chi2: 2.2190035568486435
[2025-11-06 21:15:43] 2025-11-07 04:15:06,510 | INFO     | current chi2=2.2190035568486435 (change=43.29253654906239 %)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,510 | INFO     | sum of square deviations: 128217250540.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | sum of deviations: 1260962197961.9998
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | mean x: 1762465554.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | mean y: 3551324.710067114
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | intersect: -17329548780.34038
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | chi2: 2.1790538419139853
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | current chi2=2.1790538419139853 (change=1.8003447904064398 %)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,516 | INFO     | right removable region: 744
[2025-11-06 21:15:43] 2025-11-07 04:15:06,517 | INFO     | sum of square deviations: 130816173687.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,522 | INFO     | sum of deviations: 824952122903.5001
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | mean x: 1762466011.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | mean y: 3552293.478666667
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | intersect: -11110899664.162718
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | chi2: 1.956901840534355
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | current chi2=1.956901840534355 (change=49.99064365774529 %)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,523 | INFO     | sum of square deviations: 128217250540.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | sum of deviations: 757571517932.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | mean x: 1762466164.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | mean y: 3556245.3369127517
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | intersect: -10409973615.442064
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | chi2: 1.8730738449407514
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | current chi2=1.8730738449407514 (change=4.283709783353949 %)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,529 | INFO     | left removable region: 20
[2025-11-06 21:15:43] 2025-11-07 04:15:06,530 | INFO     | sum of square deviations: 117677462225.0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | sum of deviations: 881413260462.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | mean x: 1762466133.5
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | mean y: 3573780.0787292817
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | intersect: -13197433378.052742
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | chi2: 0.09526418389612896
[2025-11-06 21:15:43] 2025-11-07 04:15:06,535 | INFO     | current memory leak: 7.49 B/s (using 724 data points, chi2=0.10)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | could have reported an average CPU frequency of 4517 MHz (29 samples)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | ..............................
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . Timing measurements:
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . get job = 0 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . initial setup = 3 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . payload setup = 5 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . stage-in = 0 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . payload execution = 46032 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . stage-out = 3 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | . log creation = 0 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,536 | INFO     | ..............................
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | 
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | job summary report
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | --------------------------------------------------
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | PanDA job id: 6874037365
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | task id: 47264539
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | errors: (none)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | pilot state: finished 
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | transexitcode: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,580 | INFO     | exeerrorcode: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | exeerrordiag: 
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | exitcode: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | exitmsg: OK
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | cpuconsumptiontime: 362692 s
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | nevents: 1000
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | neventsw: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | pid: 830385
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | pgrp: 830385
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | corecount: 8
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | event service: False
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | sizes: {0: 2349553, 1: 2349553, 3: 2349843, 11: 2349871, 46041: 2415277, 46046: 2424289, 46050: 2424473, 46053: 2424719}
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | --------------------------------------------------
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | 
[2025-11-06 21:15:43] 2025-11-07 04:15:06,581 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | job 6874037365 has completed (purged errors)
[2025-11-06 21:15:43] 2025-11-07 04:15:06,594 | INFO     | overall cleanup function is called
[2025-11-06 21:15:43] 2025-11-07 04:15:07,606 | INFO     | --- collectZombieJob: --- 10, [830385]
[2025-11-06 21:15:43] 2025-11-07 04:15:07,606 | INFO     | zombie collector waiting for pid 830385
[2025-11-06 21:15:43] 2025-11-07 04:15:07,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-06 21:15:43] 2025-11-07 04:15:07,606 | INFO     | collected zombie processes
[2025-11-06 21:15:43] 2025-11-07 04:15:07,606 | INFO     | will attempt to kill all subprocesses of pid=830385
[2025-11-06 21:15:43] 2025-11-07 04:15:07,682 | INFO     | process IDs to be killed: [830385] (in reverse order)
[2025-11-06 21:15:43] 2025-11-07 04:15:07,717 | WARNING  | found no corresponding commands to process id(s)
[2025-11-06 21:15:43] 2025-11-07 04:15:07,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-06 21:15:43] 2025-11-07 04:15:07,720 | INFO     | did not find any defunct processes belonging to 830385
[2025-11-06 21:15:43] 2025-11-07 04:15:07,722 | INFO     | did not find any defunct processes belonging to 830385
[2025-11-06 21:15:43] 2025-11-07 04:15:07,723 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 21:15:43] 2025-11-07 04:15:07,723 | INFO     | ready for new job
[2025-11-06 21:15:43] 2025-11-07 04:15:07,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-06 21:15:43] 2025-11-07 04:15:07,726 | INFO     | ***************************************
[2025-11-06 21:15:43] 2025-11-07 04:15:07,726 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-06 21:15:43] 2025-11-07 04:15:07,726 | INFO     | ***************************************
[2025-11-06 21:15:43] 2025-11-07 04:15:07,726 | INFO     | 
[2025-11-06 21:15:43] 2025-11-07 04:15:07,727 | INFO     | architecture information:
[2025-11-06 21:15:43] 2025-11-07 04:15:07,727 | INFO     | executing command: cat /etc/os-release
[2025-11-06 21:15:43] 2025-11-07 04:15:07,736 | INFO     | cat /etc/os-release:
[2025-11-06 21:15:43] NAME="CentOS Linux"
[2025-11-06 21:15:43] VERSION="7 (Core)"
[2025-11-06 21:15:43] ID="centos"
[2025-11-06 21:15:43] ID_LIKE="rhel fedora"
[2025-11-06 21:15:43] VERSION_ID="7"
[2025-11-06 21:15:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-06 21:15:43] ANSI_COLOR="0;31"
[2025-11-06 21:15:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-06 21:15:43] HOME_URL="https://www.centos.org/"
[2025-11-06 21:15:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-06 21:15:43] 
[2025-11-06 21:15:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-06 21:15:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-06 21:15:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-06 21:15:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-06 21:15:43] 
[2025-11-06 21:15:43] 2025-11-07 04:15:07,736 | INFO     | ***************************************
[2025-11-06 21:15:43] 2025-11-07 04:15:08,239 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-06 21:15:43] 2025-11-07 04:15:08,249 | INFO     | sufficient remaining disk space (672097370112 B)
[2025-11-06 21:15:43] 2025-11-07 04:15:08,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-06 21:15:43] 2025-11-07 04:15:08,249 | INFO     | current server update state: UPDATING_FINAL
[2025-11-06 21:15:43] 2025-11-07 04:15:08,249 | INFO     | update_server=False
[2025-11-06 21:15:43] 2025-11-07 04:15:08,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-06 21:15:43] 2025-11-07 04:15:08,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-06 21:15:43] 2025-11-07 04:15:08,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-06 21:15:43] 2025-11-07 04:15:08,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-06 21:15:43] 2025-11-07 04:15:08,250 | INFO     | aborting loop
[2025-11-06 21:15:43] 2025-11-07 04:15:08,744 | INFO     | all data control threads have been joined
[2025-11-06 21:15:43] 2025-11-07 04:15:08,895 | INFO     | all job control threads have been joined
[2025-11-06 21:15:43] 2025-11-07 04:15:09,138 | INFO     | all payload control threads have been joined
[2025-11-06 21:15:43] 2025-11-07 04:15:09,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-06 21:15:43] 2025-11-07 04:15:09,253 | INFO     | [job] retrieve thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,255 | INFO     | [job] job monitor thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,255 | INFO     | [job] queue monitor thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,381 | INFO     | [payload] execute_payloads thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,435 | INFO     | [payload] failed_post thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,750 | INFO     | [data] control thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:09,901 | INFO     | [job] control thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,023 | INFO     | [data] copytool_in thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,143 | INFO     | [payload] control thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,255 | INFO     | [data] copytool_out thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,328 | INFO     | [payload] validate_post thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,539 | INFO     | [payload] validate_pre thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,545 | INFO     | [job] create_data_payload thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:10,546 | INFO     | [job] validate thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:13,231 | INFO     | [data] queue_monitor thread has finished
[2025-11-06 21:15:43] 2025-11-07 04:15:36,823 | INFO     | [monitor] cgroup control has ended
[2025-11-06 21:15:43] 2025-11-07 04:15:37,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130234007574336)>', '<ExcThread(monitor, started 130233632032512)>']
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | INFO     | PID=815566 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | INFO     | .. there are 4 such processes running
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | INFO     | found 0 job(s) in 20 queues
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-06 21:15:43] 2025-11-07 04:15:38,385 | INFO     | [monitor] control thread has ended
[2025-11-06 21:15:43] 2025-11-07 04:15:42,903 | INFO     | all workflow threads have been joined
[2025-11-06 21:15:43] 2025-11-07 04:15:42,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-06 21:15:43] 2025-11-07 04:15:42,903 | INFO     | traces error code: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:42,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-06 21:15:43] 2025-11-07 04:15:42,957 [wrapper] ==== pilot stdout END ====
[2025-11-06 21:15:43] 2025-11-07 04:15:42,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-06 21:15:43] 2025-11-07 04:15:42,961 [wrapper] pilotpid: 815566
[2025-11-06 21:15:43] 2025-11-07 04:15:42,962 [wrapper] Pilot exit status: 0
[2025-11-06 21:15:43] 2025-11-07 04:15:42,967 [wrapper] pandaids: 6874037365
[2025-11-06 21:15:43] 2025-11-07 04:15:42,993 [wrapper] cleanup supervisor_pilot 1138248 815567
[2025-11-06 21:15:43] 2025-11-07 04:15:42,994 [wrapper] Test setup, not cleaning
[2025-11-06 21:15:43] 2025-11-07 04:15:42,996 [wrapper] apfmon messages muted
[2025-11-06 21:15:43] 2025-11-07 04:15:42,997 [wrapper] ==== wrapper stdout END ====
[2025-11-06 21:15:43] 2025-11-07 04:15:42,999 [wrapper] ==== wrapper stderr END ====
[2025-11-06 21:15:43]  *** Error codes and diagnostics ***
[2025-11-06 21:15:43]     "exeErrorCode": 0,
[2025-11-06 21:15:43]     "exeErrorDiag": "",
[2025-11-06 21:15:43]     "pilotErrorCode": 0,
[2025-11-06 21:15:43]     "pilotErrorDiag": "",
[2025-11-06 21:15:43]  *** Listing of results directory ***
[2025-11-06 21:15:43] total 1541872
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc     576529 Nov  6 04:52 pilot3.tar.gz
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc       5112 Nov  6 05:29 queuedata.json
[2025-11-06 21:15:43] -rwx------ 1 boinc boinc      36292 Nov  6 05:32 runpilot2-wrapper.sh
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc        100 Nov  6 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-06 21:15:43] -rwxr-xr-x 1 boinc boinc       7986 Nov  6 08:27 run_atlas
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc        105 Nov  6 08:27 job.xml
[2025-11-06 21:15:43] drwxrwx--x 2 boinc boinc       4096 Nov  6 08:27 shared
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc     590124 Nov  6 08:27 input.tar.gz
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc  320801850 Nov  6 08:27 EVNT.16513204._000002.pool.root.1
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc      15120 Nov  6 08:27 start_atlas.sh
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc          0 Nov  6 08:27 boinc_lockfile
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc       2916 Nov  6 08:27 pandaJob.out
[2025-11-06 21:15:43] -rw------- 1 boinc boinc     986470 Nov  6 08:27 agis_schedconf.cvmfs.json
[2025-11-06 21:15:43] drwx------ 5 boinc boinc       4096 Nov  6 08:27 pilot3
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc       9922 Nov  6 12:14 init_data.xml
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc        532 Nov  6 21:08 boinc_task_state.xml
[2025-11-06 21:15:43] -rw------- 1 boinc boinc 1236847166 Nov  6 21:14 HITS.47264539._000020.pool.root.1
[2025-11-06 21:15:43] -rw------- 1 boinc boinc       1036 Nov  6 21:14 memory_monitor_summary.json
[2025-11-06 21:15:43] -rw------- 1 boinc boinc    1560632 Nov  6 21:14 agis_ddmendpoints.agis.ALL.json
[2025-11-06 21:15:43] -rw------- 1 boinc boinc    2012859 Nov  6 21:14 log.47264539._000020.job.log.tgz.1
[2025-11-06 21:15:43] -rw------- 1 boinc boinc      27298 Nov  6 21:15 heartbeat.json
[2025-11-06 21:15:43] -rw------- 1 boinc boinc         95 Nov  6 21:15 pilot_heartbeat.json
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc       8192 Nov  6 21:15 boinc_mmap_file
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc         29 Nov  6 21:15 wrapper_checkpoint.txt
[2025-11-06 21:15:43] -rw------- 1 boinc boinc       4830 Nov  6 21:15 pilotlog.txt
[2025-11-06 21:15:43] -rw------- 1 boinc boinc    6602762 Nov  6 21:15 log.47264539._000020.job.log.1
[2025-11-06 21:15:43] -rw------- 1 boinc boinc        353 Nov  6 21:15 output.list
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc        620 Nov  6 21:15 runtime_log
[2025-11-06 21:15:43] -rw------- 1 boinc boinc    8652800 Nov  6 21:15 result.tar.gz
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc       8787 Nov  6 21:15 runtime_log.err
[2025-11-06 21:15:43] -rw------- 1 boinc boinc        663 Nov  6 21:15 7gnKDmvKEb8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuHJODm4lDQ0m.diag
[2025-11-06 21:15:43] -rw-r--r-- 1 boinc boinc      21342 Nov  6 21:15 stderr.txt
[2025-11-06 21:15:43] HITS file was successfully produced:
[2025-11-06 21:15:43] -rw------- 1 boinc boinc 1236847166 Nov  6 21:14 shared/HITS.pool.root.1
[2025-11-06 21:15:43]  *** Contents of shared directory: ***
[2025-11-06 21:15:43] total 1530200
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc     590124 Nov  6 08:27 input.tar.gz
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc  320801850 Nov  6 08:27 ATLAS.root_0
[2025-11-06 21:15:43] -rw-r--r-- 2 boinc boinc      15120 Nov  6 08:27 start_atlas.sh
[2025-11-06 21:15:43] -rw------- 1 boinc boinc 1236847166 Nov  6 21:14 HITS.pool.root.1
[2025-11-06 21:15:43] -rw------- 1 boinc boinc    8652800 Nov  6 21:15 result.tar.gz
21:15:44 (807514): run_atlas exited; CPU time 362498.464874
21:15:44 (807514): called boinc_finish(0)

</stderr_txt>
]]>

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