Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
21:13:48 (1140798): wrapper (7.7.26015): starting
21:13:48 (1140798): wrapper: running run_atlas (--nthreads 8)
[2025-11-06 21:13:48] Arguments: --nthreads 8
[2025-11-06 21:13:48] Threads: 8
[2025-11-06 21:13:48] Checking for CVMFS
[2025-11-06 21:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 21:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 21:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 21:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 21:13:49] 2.13.3.0 744127 940 49484 152569 1 68 2778319 4096000 2495 130560 0 1214011 99.596 361664 563 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-06 21:13:49] CVMFS is ok
[2025-11-06 21:13:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 21:13:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-06 21:13:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-06 21:13:49] Further information can be found at the LHC@home message board.
[2025-11-06 21:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 21:13:49] Checking for apptainer binary...
[2025-11-06 21:13:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 21:13:49] Running /usr/bin/apptainer --version
[2025-11-06 21:13:49] apptainer version 1.4.4
[2025-11-06 21:13:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 21:13:49] garage
[2025-11-06 21:13:49] apptainer works
[2025-11-06 21:13:49] Set ATHENA_PROC_NUMBER=8
[2025-11-06 21:13:49] Set ATHENA_CORE_NUMBER=8
[2025-11-06 21:13:49] Starting ATLAS job with PandaID=6874037363
[2025-11-06 21:13:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-07 08:01:26]  *** The last 200 lines of the pilot log: ***
[2025-11-07 08:01:26] 2025-11-07 15:00:54,275 | INFO     | monitor loop #2900: job 0:6874037363 is in state 'finished'
[2025-11-07 08:01:26] 2025-11-07 15:00:54,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,918 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-07 08:01:26] 2025-11-07 15:00:54,919 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2749.2002812499995
[2025-11-07 08:01:26] 2025-11-07 15:00:54,921 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6874037363/memory_monitor_summary.json (trf name=prmon)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,921 | INFO     | extracted standard info from prmon json
[2025-11-07 08:01:26] 2025-11-07 15:00:54,921 | INFO     | extracted standard memory fields from prmon json
[2025-11-07 08:01:26] 2025-11-07 15:00:54,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-07 08:01:26] 2025-11-07 15:00:54,924 | INFO     | fitting pss+swap vs Time
[2025-11-07 08:01:26] 2025-11-07 15:00:54,924 | INFO     | sum of square deviations: 79771570386.9608
[2025-11-07 08:01:26] 2025-11-07 15:00:54,926 | INFO     | sum of deviations: 981174527750.6403
[2025-11-07 08:01:26] 2025-11-07 15:00:54,926 | INFO     | mean x: 1762508227.5078616
[2025-11-07 08:01:26] 2025-11-07 15:00:54,926 | INFO     | mean y: 3528758.072327044
[2025-11-07 08:01:26] 2025-11-07 15:00:54,926 | INFO     | intersect: -21674973613.047028
[2025-11-07 08:01:26] 2025-11-07 15:00:54,926 | INFO     | chi2: 2.934920168582875
[2025-11-07 08:01:26] 2025-11-07 15:00:54,927 | INFO     | sum of square deviations: 77904913656.96033
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | sum of deviations: 1068516752796.3346
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | mean x: 1762508075.0079238
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | mean y: 3535860.3328050715
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | intersect: -24170413081.802074
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | chi2: 2.1300860749036272
[2025-11-07 08:01:26] 2025-11-07 15:00:54,929 | INFO     | current chi2=2.1300860749036272 (change=27.422691161915374 %)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,930 | INFO     | sum of square deviations: 76067606314.46011
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | sum of deviations: 1052067145242.9951
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | mean x: 1762507922.5079873
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | mean y: 3534495.1006389777
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | intersect: -24373158401.42147
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | chi2: 2.1280647805069246
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | current chi2=2.1280647805069246 (change=0.09489261586736923 %)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,932 | INFO     | right removable region: 625
[2025-11-07 08:01:26] 2025-11-07 15:00:54,933 | INFO     | sum of square deviations: 77904910606.96034
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | sum of deviations: 791859988329.8746
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | mean x: 1762508380.0079238
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | mean y: 3544187.2250396195
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | intersect: -17911370987.578934
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | chi2: 1.011782593625032
[2025-11-07 08:01:26] 2025-11-07 15:00:54,935 | INFO     | current chi2=1.011782593625032 (change=65.52606082932843 %)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,936 | INFO     | sum of square deviations: 76067600214.46011
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | sum of deviations: 732948936010.0126
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | mean x: 1762508532.5079873
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | mean y: 3549074.0974440896
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | intersect: -16979092023.66558
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | chi2: 0.9326462122276824
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | current chi2=0.9326462122276824 (change=7.821480809807016 %)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,938 | INFO     | left removable region: 20
[2025-11-07 08:01:26] 2025-11-07 15:00:54,939 | INFO     | sum of square deviations: 68666150116.95837
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | sum of deviations: 728268601549.1564
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | mean x: 1762508502.0082645
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | mean y: 3561639.3685950413
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | intersect: -18689485805.25658
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | chi2: 0.0874167356007287
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | current memory leak: 10.61 B/s (using 605 data points, chi2=0.09)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | could have reported an average CPU frequency of 4375 MHz (25 samples)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | ..............................
[2025-11-07 08:01:26] 2025-11-07 15:00:54,941 | INFO     | . Timing measurements:
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . get job = 0 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . initial setup = 6 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . payload setup = 4 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . stage-in = 0 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . payload execution = 38788 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . stage-out = 3 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | . log creation = 0 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,942 | INFO     | ..............................
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | 
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | job summary report
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | --------------------------------------------------
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | PanDA job id: 6874037363
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | task id: 47264539
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | errors: (none)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | pilot state: finished 
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | transexitcode: 0
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | exeerrorcode: 0
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | exeerrordiag: 
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | exitcode: 0
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | exitmsg: OK
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | cpuconsumptiontime: 306473 s
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | nevents: 1000
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | neventsw: 0
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | pid: 1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | pgrp: 1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | corecount: 8
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | event service: False
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | sizes: {0: 2349553, 2: 2349815, 11: 2349843, 38796: 2412423, 38800: 2421435, 38801: 2421491, 38802: 2421929}
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | --------------------------------------------------
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | 
[2025-11-07 08:01:26] 2025-11-07 15:00:54,964 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-07 08:01:26] 2025-11-07 15:00:54,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | job 6874037363 has completed (purged errors)
[2025-11-07 08:01:26] 2025-11-07 15:00:54,973 | INFO     | overall cleanup function is called
[2025-11-07 08:01:26] 2025-11-07 15:00:55,983 | INFO     | --- collectZombieJob: --- 10, [1151976]
[2025-11-07 08:01:26] 2025-11-07 15:00:55,983 | INFO     | zombie collector waiting for pid 1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:55,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-07 08:01:26] 2025-11-07 15:00:55,983 | INFO     | collected zombie processes
[2025-11-07 08:01:26] 2025-11-07 15:00:55,983 | INFO     | will attempt to kill all subprocesses of pid=1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:56,016 | INFO     | process IDs to be killed: [1151976] (in reverse order)
[2025-11-07 08:01:26] 2025-11-07 15:00:56,036 | WARNING  | found no corresponding commands to process id(s)
[2025-11-07 08:01:26] 2025-11-07 15:00:56,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-07 08:01:26] 2025-11-07 15:00:56,037 | INFO     | did not find any defunct processes belonging to 1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:56,038 | INFO     | did not find any defunct processes belonging to 1151976
[2025-11-07 08:01:26] 2025-11-07 15:00:56,039 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-07 08:01:26] 2025-11-07 15:00:56,039 | INFO     | ready for new job
[2025-11-07 08:01:26] 2025-11-07 15:00:56,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-07 08:01:26] 2025-11-07 15:00:56,040 | INFO     | ***************************************
[2025-11-07 08:01:26] 2025-11-07 15:00:56,040 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-07 08:01:26] 2025-11-07 15:00:56,040 | INFO     | ***************************************
[2025-11-07 08:01:26] 2025-11-07 15:00:56,041 | INFO     | 
[2025-11-07 08:01:26] 2025-11-07 15:00:56,041 | INFO     | architecture information:
[2025-11-07 08:01:26] 2025-11-07 15:00:56,041 | INFO     | executing command: cat /etc/os-release
[2025-11-07 08:01:26] 2025-11-07 15:00:56,047 | INFO     | cat /etc/os-release:
[2025-11-07 08:01:26] NAME="CentOS Linux"
[2025-11-07 08:01:26] VERSION="7 (Core)"
[2025-11-07 08:01:26] ID="centos"
[2025-11-07 08:01:26] ID_LIKE="rhel fedora"
[2025-11-07 08:01:26] VERSION_ID="7"
[2025-11-07 08:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-07 08:01:26] ANSI_COLOR="0;31"
[2025-11-07 08:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-07 08:01:26] HOME_URL="https://www.centos.org/"
[2025-11-07 08:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-07 08:01:26] 
[2025-11-07 08:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-07 08:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-07 08:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-07 08:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-07 08:01:26] 
[2025-11-07 08:01:26] 2025-11-07 15:00:56,047 | INFO     | ***************************************
[2025-11-07 08:01:26] 2025-11-07 15:00:56,550 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-07 08:01:26] 2025-11-07 15:00:56,557 | INFO     | sufficient remaining disk space (677132632064 B)
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | INFO     | current server update state: UPDATING_FINAL
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | INFO     | update_server=False
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-07 08:01:26] 2025-11-07 15:00:56,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-07 08:01:26] 2025-11-07 15:00:56,778 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-07 08:01:26] 2025-11-07 15:00:56,778 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-07 08:01:26] 2025-11-07 15:00:56,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-07 08:01:26] 2025-11-07 15:00:56,778 | INFO     | will abort loop
[2025-11-07 08:01:26] 2025-11-07 15:00:56,847 | INFO     | all data control threads have been joined
[2025-11-07 08:01:26] 2025-11-07 15:00:57,370 | INFO     | all payload control threads have been joined
[2025-11-07 08:01:26] 2025-11-07 15:00:57,561 | INFO     | [job] retrieve thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,563 | INFO     | [job] queue monitor thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,783 | INFO     | [job] job monitor thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,827 | INFO     | [job] validate thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,853 | INFO     | [data] control thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,934 | INFO     | [payload] validate_pre thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:57,944 | INFO     | all job control threads have been joined
[2025-11-07 08:01:26] 2025-11-07 15:00:58,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,375 | INFO     | [payload] control thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,426 | INFO     | [payload] failed_post thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,427 | INFO     | [payload] execute_payloads thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,488 | INFO     | [data] copytool_in thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,563 | INFO     | [job] create_data_payload thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,563 | INFO     | [data] copytool_out thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:58,949 | INFO     | [job] control thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:59,087 | INFO     | [payload] validate_post thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:00:59,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-07 08:01:26] 2025-11-07 15:01:00,876 | INFO     | [monitor] cgroup control has ended
[2025-11-07 08:01:26] 2025-11-07 15:01:03,539 | INFO     | [data] queue_monitor thread has finished
[2025-11-07 08:01:26] 2025-11-07 15:01:04,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132460679907136)>', '<ExcThread(monitor, started 132460134270720)>']
[2025-11-07 08:01:26] 2025-11-07 15:01:09,413 | INFO     | all workflow threads have been joined
[2025-11-07 08:01:26] 2025-11-07 15:01:09,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-07 08:01:26] 2025-11-07 15:01:09,413 | INFO     | traces error code: 0
[2025-11-07 08:01:26] 2025-11-07 15:01:09,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-07 08:01:26] 2025-11-07 15:01:26,690 | INFO     | PID=1144656 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-07 08:01:26] 2025-11-07 15:01:26,691 | INFO     | found 0 job(s) in 20 queues
[2025-11-07 08:01:26] 2025-11-07 15:01:26,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-07 08:01:26] 2025-11-07 15:01:26,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-07 08:01:26] 2025-11-07 15:01:26,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-07 08:01:26] 2025-11-07 15:01:26,691 | INFO     | [monitor] control thread has ended
[2025-11-07 08:01:26] 2025-11-07 15:01:26,722 [wrapper] ==== pilot stdout END ====
[2025-11-07 08:01:26] 2025-11-07 15:01:26,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-07 08:01:26] 2025-11-07 15:01:26,724 [wrapper] pilotpid: 1144656
[2025-11-07 08:01:26] 2025-11-07 15:01:26,725 [wrapper] Pilot exit status: 0
[2025-11-07 08:01:26] 2025-11-07 15:01:26,729 [wrapper] pandaids: 6874037363
[2025-11-07 08:01:26] 2025-11-07 15:01:26,741 [wrapper] cleanup supervisor_pilot 1373791 1144657
[2025-11-07 08:01:26] 2025-11-07 15:01:26,743 [wrapper] Test setup, not cleaning
[2025-11-07 08:01:26] 2025-11-07 15:01:26,744 [wrapper] apfmon messages muted
[2025-11-07 08:01:26] 2025-11-07 15:01:26,745 [wrapper] ==== wrapper stdout END ====
[2025-11-07 08:01:26] 2025-11-07 15:01:26,746 [wrapper] ==== wrapper stderr END ====
[2025-11-07 08:01:26]  *** Error codes and diagnostics ***
[2025-11-07 08:01:26]     "exeErrorCode": 0,
[2025-11-07 08:01:26]     "exeErrorDiag": "",
[2025-11-07 08:01:26]     "pilotErrorCode": 0,
[2025-11-07 08:01:26]     "pilotErrorDiag": "",
[2025-11-07 08:01:26]  *** Listing of results directory ***
[2025-11-07 08:01:26] total 1540704
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc     576529 Nov  6 04:52 pilot3.tar.gz
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc       5112 Nov  6 05:29 queuedata.json
[2025-11-07 08:01:26] -rwx------ 1 boinc boinc      36292 Nov  6 05:32 runpilot2-wrapper.sh
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc        100 Nov  6 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-07 08:01:26] -rwxr-xr-x 1 boinc boinc       7986 Nov  6 21:13 run_atlas
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc        105 Nov  6 21:13 job.xml
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc       9914 Nov  6 21:13 init_data.xml
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc  320801850 Nov  6 21:13 EVNT.16513204._000002.pool.root.1
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc      15120 Nov  6 21:13 start_atlas.sh
[2025-11-07 08:01:26] drwxrwx--x 2 boinc boinc       4096 Nov  6 21:13 shared
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc     590125 Nov  6 21:13 input.tar.gz
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc          0 Nov  6 21:13 boinc_lockfile
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc       2916 Nov  6 21:13 pandaJob.out
[2025-11-07 08:01:26] -rw------- 1 boinc boinc     986551 Nov  6 21:13 agis_schedconf.cvmfs.json
[2025-11-07 08:01:26] drwx------ 5 boinc boinc       4096 Nov  6 21:13 pilot3
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc        533 Nov  7 07:56 boinc_task_state.xml
[2025-11-07 08:01:26] -rw------- 1 boinc boinc 1237865713 Nov  7 08:00 HITS.47264539._000018.pool.root.1
[2025-11-07 08:01:26] -rw------- 1 boinc boinc       1037 Nov  7 08:00 memory_monitor_summary.json
[2025-11-07 08:01:26] -rw------- 1 boinc boinc    1560632 Nov  7 08:00 agis_ddmendpoints.agis.ALL.json
[2025-11-07 08:01:26] -rw------- 1 boinc boinc    1927789 Nov  7 08:00 log.47264539._000018.job.log.tgz.1
[2025-11-07 08:01:26] -rw------- 1 boinc boinc      27760 Nov  7 08:00 heartbeat.json
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc         29 Nov  7 08:01 wrapper_checkpoint.txt
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc       8192 Nov  7 08:01 boinc_mmap_file
[2025-11-07 08:01:26] -rw------- 1 boinc boinc        747 Nov  7 08:01 pilotlog.txt
[2025-11-07 08:01:26] -rw------- 1 boinc boinc         95 Nov  7 08:01 pilot_heartbeat.json
[2025-11-07 08:01:26] -rw------- 1 boinc boinc    5584477 Nov  7 08:01 log.47264539._000018.job.log.1
[2025-11-07 08:01:26] -rw------- 1 boinc boinc        353 Nov  7 08:01 output.list
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc        620 Nov  7 08:01 runtime_log
[2025-11-07 08:01:26] -rw------- 1 boinc boinc    7546880 Nov  7 08:01 result.tar.gz
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc       8787 Nov  7 08:01 runtime_log.err
[2025-11-07 08:01:26] -rw------- 1 boinc boinc        663 Nov  7 08:01 hPlKDmvKEb8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsHJODm9MrHWn.diag
[2025-11-07 08:01:26] -rw-r--r-- 1 boinc boinc      21415 Nov  7 08:01 stderr.txt
[2025-11-07 08:01:26] HITS file was successfully produced:
[2025-11-07 08:01:26] -rw------- 1 boinc boinc 1237865713 Nov  7 08:00 shared/HITS.pool.root.1
[2025-11-07 08:01:26]  *** Contents of shared directory: ***
[2025-11-07 08:01:26] total 1530116
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc  320801850 Nov  6 21:13 ATLAS.root_0
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc      15120 Nov  6 21:13 start_atlas.sh
[2025-11-07 08:01:26] -rw-r--r-- 2 boinc boinc     590125 Nov  6 21:13 input.tar.gz
[2025-11-07 08:01:26] -rw------- 1 boinc boinc 1237865713 Nov  7 08:00 HITS.pool.root.1
[2025-11-07 08:01:26] -rw------- 1 boinc boinc    7546880 Nov  7 08:01 result.tar.gz
08:01:28 (1140798): run_atlas exited; CPU time 306276.336445
08:01:28 (1140798): called boinc_finish(0)

</stderr_txt>
]]>

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