Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
05:33:33 (743961): wrapper (7.7.26015): starting
05:33:33 (743961): wrapper: running run_atlas (--nthreads 8)
[2025-11-06 05:33:33] Arguments: --nthreads 8
[2025-11-06 05:33:33] Threads: 8
[2025-11-06 05:33:33] Checking for CVMFS
[2025-11-06 05:33:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 05:33:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 05:33:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 05:33:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 05:33:37] 2.13.3.0 744127 0 25056 152539 3 1 1701957 4096000 0 130560 0 0 0.000 1291 795 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-06 05:33:37] CVMFS is ok
[2025-11-06 05:33:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 05:33:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-06 05:33:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-06 05:33:37] Further information can be found at the LHC@home message board.
[2025-11-06 05:33:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 05:33:37] Checking for apptainer binary...
[2025-11-06 05:33:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 05:33:37] Running /usr/bin/apptainer --version
[2025-11-06 05:33:37] apptainer version 1.4.4
[2025-11-06 05:33:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 05:33:37] garage
[2025-11-06 05:33:37] apptainer works
[2025-11-06 05:33:37] Set ATHENA_PROC_NUMBER=8
[2025-11-06 05:33:37] Set ATHENA_CORE_NUMBER=8
[2025-11-06 05:33:37] Starting ATLAS job with PandaID=6874037351
[2025-11-06 05:33:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-06 16:27:59]  *** The last 200 lines of the pilot log: ***
[2025-11-06 16:27:59] 2025-11-06 23:27:44,086 | INFO     | extracted standard info from prmon json
[2025-11-06 16:27:59] 2025-11-06 23:27:44,086 | INFO     | extracted standard memory fields from prmon json
[2025-11-06 16:27:59] 2025-11-06 23:27:44,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-06 16:27:59] 2025-11-06 23:27:44,091 | INFO     | fitting pss+swap vs Time
[2025-11-06 16:27:59] 2025-11-06 23:27:44,091 | INFO     | sum of square deviations: 82434743762.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | sum of deviations: 912758321674.9998
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | mean x: 1762452050.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | mean y: 3523204.493001555
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | intersect: -19511219024.040775
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | chi2: 9.077268617641696
[2025-11-06 16:27:59] 2025-11-06 23:27:44,096 | INFO     | sum of square deviations: 80526605659.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | sum of deviations: 1137603047872.9995
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | mean x: 1762451897.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | mean y: 3541142.451410658
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | intersect: -24894697568.905697
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | chi2: 6.4840492235689995
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | current chi2=6.4840492235689995 (change=28.568278667359998 %)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,101 | INFO     | sum of square deviations: 78648142532.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | sum of deviations: 1149812691363.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | mean x: 1762451745.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | mean y: 3542124.87835703
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | intersect: -25762983556.148846
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | chi2: 6.420739320664001
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | current chi2=6.420739320664001 (change=0.976394544860513 %)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,106 | INFO     | right removable region: 632
[2025-11-06 16:27:59] 2025-11-06 23:27:44,107 | INFO     | sum of square deviations: 80526605659.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | sum of deviations: 602418141731.5004
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | mean x: 1762452202.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | mean y: 3547998.2805642635
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | intersect: -13181326392.303957
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | chi2: 4.931247187103146
[2025-11-06 16:27:59] 2025-11-06 23:27:44,111 | INFO     | current chi2=4.931247187103146 (change=45.674768536437774 %)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,112 | INFO     | sum of square deviations: 78648142532.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,116 | INFO     | sum of deviations: 396798343984.99994
[2025-11-06 16:27:59] 2025-11-06 23:27:44,116 | INFO     | mean x: 1762452355.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,116 | INFO     | mean y: 3564665.3807266983
[2025-11-06 16:27:59] 2025-11-06 23:27:44,116 | INFO     | intersect: -8888421251.92075
[2025-11-06 16:27:59] 2025-11-06 23:27:44,116 | INFO     | chi2: 2.9906332841358862
[2025-11-06 16:27:59] 2025-11-06 23:27:44,117 | INFO     | current chi2=2.9906332841358862 (change=39.353409580493384 %)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,117 | INFO     | sum of square deviations: 76799121817.0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,121 | INFO     | sum of deviations: 347679037655.0001
[2025-11-06 16:27:59] 2025-11-06 23:27:44,121 | INFO     | mean x: 1762452507.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,121 | INFO     | mean y: 3568713.0127388537
[2025-11-06 16:27:59] 2025-11-06 23:27:44,121 | INFO     | intersect: -7975269810.432481
[2025-11-06 16:27:59] 2025-11-06 23:27:44,122 | INFO     | chi2: 2.9228009834655424
[2025-11-06 16:27:59] 2025-11-06 23:27:44,122 | INFO     | current chi2=2.9228009834655424 (change=2.2681584208323726 %)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,122 | INFO     | left removable region: 30
[2025-11-06 16:27:59] 2025-11-06 23:27:44,122 | INFO     | sum of square deviations: 67649828410.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | sum of deviations: 470884123490.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | mean x: 1762452629.5
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | mean y: 3598837.712624585
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | intersect: -12264147897.722157
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | chi2: 0.10028586975806786
[2025-11-06 16:27:59] 2025-11-06 23:27:44,126 | INFO     | current memory leak: 6.96 B/s (using 602 data points, chi2=0.10)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | could have reported an average CPU frequency of 4508 MHz (25 samples)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | ..............................
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . Timing measurements:
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . get job = 0 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . initial setup = 2 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . payload setup = 24 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . stage-in = 0 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . payload execution = 39175 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . stage-out = 5 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | . log creation = 0 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,127 | INFO     | ..............................
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | 
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | job summary report
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | --------------------------------------------------
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | PanDA job id: 6874037351
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | task id: 47264539
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | errors: (none)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-06 16:27:59] 2025-11-06 23:27:44,174 | INFO     | pilot state: finished 
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | transexitcode: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | exeerrorcode: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | exeerrordiag: 
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | exitcode: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | exitmsg: OK
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | cpuconsumptiontime: 305925 s
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | nevents: 1000
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | neventsw: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | pid: 766763
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | pgrp: 766763
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | corecount: 8
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | event service: False
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | sizes: {0: 2349549, 1: 2349811, 10: 2349839, 39202: 2411156, 39209: 2420168, 39211: 2420224, 39221: 2420662}
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | --------------------------------------------------
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | 
[2025-11-06 16:27:59] 2025-11-06 23:27:44,175 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-06 16:27:59] 2025-11-06 23:27:44,189 | INFO     | job 6874037351 has completed (purged errors)
[2025-11-06 16:27:59] 2025-11-06 23:27:44,189 | INFO     | overall cleanup function is called
[2025-11-06 16:27:59] 2025-11-06 23:27:45,201 | INFO     | --- collectZombieJob: --- 10, [766763]
[2025-11-06 16:27:59] 2025-11-06 23:27:45,201 | INFO     | zombie collector waiting for pid 766763
[2025-11-06 16:27:59] 2025-11-06 23:27:45,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-06 16:27:59] 2025-11-06 23:27:45,201 | INFO     | collected zombie processes
[2025-11-06 16:27:59] 2025-11-06 23:27:45,201 | INFO     | will attempt to kill all subprocesses of pid=766763
[2025-11-06 16:27:59] 2025-11-06 23:27:45,276 | INFO     | process IDs to be killed: [766763] (in reverse order)
[2025-11-06 16:27:59] 2025-11-06 23:27:45,312 | WARNING  | found no corresponding commands to process id(s)
[2025-11-06 16:27:59] 2025-11-06 23:27:45,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-06 16:27:59] 2025-11-06 23:27:45,315 | INFO     | did not find any defunct processes belonging to 766763
[2025-11-06 16:27:59] 2025-11-06 23:27:45,318 | INFO     | did not find any defunct processes belonging to 766763
[2025-11-06 16:27:59] 2025-11-06 23:27:45,318 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 16:27:59] 2025-11-06 23:27:45,318 | INFO     | ready for new job
[2025-11-06 16:27:59] 2025-11-06 23:27:45,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-06 16:27:59] 2025-11-06 23:27:45,320 | INFO     | ***************************************
[2025-11-06 16:27:59] 2025-11-06 23:27:45,320 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-06 16:27:59] 2025-11-06 23:27:45,320 | INFO     | ***************************************
[2025-11-06 16:27:59] 2025-11-06 23:27:45,321 | INFO     | 
[2025-11-06 16:27:59] 2025-11-06 23:27:45,322 | INFO     | architecture information:
[2025-11-06 16:27:59] 2025-11-06 23:27:45,322 | INFO     | executing command: cat /etc/os-release
[2025-11-06 16:27:59] 2025-11-06 23:27:45,332 | INFO     | cat /etc/os-release:
[2025-11-06 16:27:59] NAME="CentOS Linux"
[2025-11-06 16:27:59] VERSION="7 (Core)"
[2025-11-06 16:27:59] ID="centos"
[2025-11-06 16:27:59] ID_LIKE="rhel fedora"
[2025-11-06 16:27:59] VERSION_ID="7"
[2025-11-06 16:27:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-06 16:27:59] ANSI_COLOR="0;31"
[2025-11-06 16:27:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-06 16:27:59] HOME_URL="https://www.centos.org/"
[2025-11-06 16:27:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-06 16:27:59] 
[2025-11-06 16:27:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-06 16:27:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-06 16:27:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-06 16:27:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-06 16:27:59] 
[2025-11-06 16:27:59] 2025-11-06 23:27:45,332 | INFO     | ***************************************
[2025-11-06 16:27:59] 2025-11-06 23:27:45,832 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-06 16:27:59] 2025-11-06 23:27:45,843 | INFO     | sufficient remaining disk space (672784187392 B)
[2025-11-06 16:27:59] 2025-11-06 23:27:45,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-06 16:27:59] 2025-11-06 23:27:45,843 | INFO     | current server update state: UPDATING_FINAL
[2025-11-06 16:27:59] 2025-11-06 23:27:45,843 | INFO     | update_server=False
[2025-11-06 16:27:59] 2025-11-06 23:27:45,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-06 16:27:59] 2025-11-06 23:27:45,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-06 16:27:59] 2025-11-06 23:27:46,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-06 16:27:59] 2025-11-06 23:27:46,266 | INFO     | aborting loop
[2025-11-06 16:27:59] 2025-11-06 23:27:46,359 | INFO     | all job control threads have been joined
[2025-11-06 16:27:59] 2025-11-06 23:27:46,739 | INFO     | all payload control threads have been joined
[2025-11-06 16:27:59] 2025-11-06 23:27:46,760 | INFO     | all data control threads have been joined
[2025-11-06 16:27:59] 2025-11-06 23:27:46,844 | INFO     | [job] queue monitor thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:46,849 | INFO     | [job] retrieve thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,016 | INFO     | [payload] failed_post thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,084 | INFO     | [payload] validate_pre thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,155 | INFO     | [job] create_data_payload thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,271 | INFO     | [job] job monitor thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,364 | INFO     | [job] control thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,745 | INFO     | [payload] control thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,765 | INFO     | [data] control thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,849 | INFO     | [data] copytool_out thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,947 | INFO     | [data] copytool_in thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:47,999 | INFO     | [payload] validate_post thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:48,159 | INFO     | [payload] execute_payloads thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:48,287 | INFO     | [job] validate thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:49,850 | INFO     | [data] queue_monitor thread has finished
[2025-11-06 16:27:59] 2025-11-06 23:27:52,979 | INFO     | [monitor] cgroup control has ended
[2025-11-06 16:27:59] 2025-11-06 23:27:53,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125572158310208)>', '<ExcThread(monitor, started 125571589736192)>']
[2025-11-06 16:27:59] 2025-11-06 23:27:54,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-06 16:27:59] 2025-11-06 23:27:54,888 | INFO     | [monitor] control thread has ended
[2025-11-06 16:27:59] 2025-11-06 23:27:58,981 | INFO     | all workflow threads have been joined
[2025-11-06 16:27:59] 2025-11-06 23:27:58,982 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-06 16:27:59] 2025-11-06 23:27:58,982 | INFO     | traces error code: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:58,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-06 16:27:59] 2025-11-06 23:27:59,039 [wrapper] ==== pilot stdout END ====
[2025-11-06 16:27:59] 2025-11-06 23:27:59,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-06 16:27:59] 2025-11-06 23:27:59,042 [wrapper] pilotpid: 752140
[2025-11-06 16:27:59] 2025-11-06 23:27:59,044 [wrapper] Pilot exit status: 0
[2025-11-06 16:27:59] 2025-11-06 23:27:59,049 [wrapper] pandaids: 6874037351
[2025-11-06 16:27:59] 2025-11-06 23:27:59,073 [wrapper] cleanup supervisor_pilot 1020343 752141
[2025-11-06 16:27:59] 2025-11-06 23:27:59,074 [wrapper] Test setup, not cleaning
[2025-11-06 16:27:59] 2025-11-06 23:27:59,076 [wrapper] apfmon messages muted
[2025-11-06 16:27:59] 2025-11-06 23:27:59,078 [wrapper] ==== wrapper stdout END ====
[2025-11-06 16:27:59] 2025-11-06 23:27:59,079 [wrapper] ==== wrapper stderr END ====
[2025-11-06 16:27:59]  *** Error codes and diagnostics ***
[2025-11-06 16:27:59]     "exeErrorCode": 0,
[2025-11-06 16:27:59]     "exeErrorDiag": "",
[2025-11-06 16:27:59]     "pilotErrorCode": 0,
[2025-11-06 16:27:59]     "pilotErrorDiag": "",
[2025-11-06 16:27:59]  *** Listing of results directory ***
[2025-11-06 16:27:59] total 1537444
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc     576529 Nov  6 04:52 pilot3.tar.gz
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc       5112 Nov  6 05:29 queuedata.json
[2025-11-06 16:27:59] -rwx------ 1 boinc boinc      36292 Nov  6 05:32 runpilot2-wrapper.sh
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc        100 Nov  6 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-06 16:27:59] -rwxr-xr-x 1 boinc boinc       7986 Nov  6 05:33 run_atlas
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc        105 Nov  6 05:33 job.xml
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc      15120 Nov  6 05:33 start_atlas.sh
[2025-11-06 16:27:59] drwxrwx--x 2 boinc boinc       4096 Nov  6 05:33 shared
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc     590123 Nov  6 05:33 input.tar.gz
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc  318500604 Nov  6 05:33 EVNT.16513204._000001.pool.root.1
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc          0 Nov  6 05:33 boinc_lockfile
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc       2914 Nov  6 05:33 pandaJob.out
[2025-11-06 16:27:59] -rw------- 1 boinc boinc     985759 Nov  6 05:33 agis_schedconf.cvmfs.json
[2025-11-06 16:27:59] drwx------ 5 boinc boinc       4096 Nov  6 05:33 pilot3
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc       9922 Nov  6 12:14 init_data.xml
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc        532 Nov  6 16:19 boinc_task_state.xml
[2025-11-06 16:27:59] -rw------- 1 boinc boinc         95 Nov  6 16:27 pilot_heartbeat.json
[2025-11-06 16:27:59] -rw------- 1 boinc boinc 1236691467 Nov  6 16:27 HITS.47264539._000006.pool.root.1
[2025-11-06 16:27:59] -rw------- 1 boinc boinc       1035 Nov  6 16:27 memory_monitor_summary.json
[2025-11-06 16:27:59] -rw------- 1 boinc boinc    1560632 Nov  6 16:27 agis_ddmendpoints.agis.ALL.json
[2025-11-06 16:27:59] -rw------- 1 boinc boinc    1928557 Nov  6 16:27 log.47264539._000006.job.log.tgz.1
[2025-11-06 16:27:59] -rw------- 1 boinc boinc      26673 Nov  6 16:27 heartbeat.json
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc       8192 Nov  6 16:27 boinc_mmap_file
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc         29 Nov  6 16:27 wrapper_checkpoint.txt
[2025-11-06 16:27:59] -rw------- 1 boinc boinc       4560 Nov  6 16:27 pilotlog.txt
[2025-11-06 16:27:59] -rw------- 1 boinc boinc    5652294 Nov  6 16:27 log.47264539._000006.job.log.1
[2025-11-06 16:27:59] -rw------- 1 boinc boinc        353 Nov  6 16:27 output.list
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc        620 Nov  6 16:27 runtime_log
[2025-11-06 16:27:59] -rw------- 1 boinc boinc    7618560 Nov  6 16:27 result.tar.gz
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc       8787 Nov  6 16:27 runtime_log.err
[2025-11-06 16:27:59] -rw------- 1 boinc boinc        663 Nov  6 16:27 6zXKDmvKEb8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhHJODmzyZxvn.diag
[2025-11-06 16:27:59] -rw-r--r-- 1 boinc boinc      21007 Nov  6 16:27 stderr.txt
[2025-11-06 16:27:59] HITS file was successfully produced:
[2025-11-06 16:27:59] -rw------- 1 boinc boinc 1236691467 Nov  6 16:27 shared/HITS.pool.root.1
[2025-11-06 16:27:59]  *** Contents of shared directory: ***
[2025-11-06 16:27:59] total 1526788
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc      15120 Nov  6 05:33 start_atlas.sh
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc     590123 Nov  6 05:33 input.tar.gz
[2025-11-06 16:27:59] -rw-r--r-- 2 boinc boinc  318500604 Nov  6 05:33 ATLAS.root_0
[2025-11-06 16:27:59] -rw------- 1 boinc boinc 1236691467 Nov  6 16:27 HITS.pool.root.1
[2025-11-06 16:27:59] -rw------- 1 boinc boinc    7618560 Nov  6 16:27 result.tar.gz
16:28:00 (743961): run_atlas exited; CPU time 305725.070765
16:28:00 (743961): called boinc_finish(0)

</stderr_txt>
]]>

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