Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
02:18:23 (618117): wrapper (7.7.26015): starting
02:18:23 (618117): wrapper: running run_atlas (--nthreads 8)
[2025-11-06 02:18:23] Arguments: --nthreads 8
[2025-11-06 02:18:23] Threads: 8
[2025-11-06 02:18:23] Checking for CVMFS
[2025-11-06 02:18:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 02:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 02:18:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 02:18:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 02:18:24] 2.13.3.0 559165 35 46548 152532 0 57 1673476 4096001 922 130560 0 166449 99.986 5447 652 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-06 02:18:24] CVMFS is ok
[2025-11-06 02:18:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 02:18:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-06 02:18:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-06 02:18:24] Further information can be found at the LHC@home message board.
[2025-11-06 02:18:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 02:18:24] Checking for apptainer binary...
[2025-11-06 02:18:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 02:18:24] Running /usr/bin/apptainer --version
[2025-11-06 02:18:24] apptainer version 1.4.4
[2025-11-06 02:18:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 02:18:24] garage
[2025-11-06 02:18:24] apptainer works
[2025-11-06 02:18:24] Set ATHENA_PROC_NUMBER=8
[2025-11-06 02:18:24] Set ATHENA_CORE_NUMBER=8
[2025-11-06 02:18:24] Starting ATLAS job with PandaID=6873882122
[2025-11-06 02:18:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-06 02:52:38]  *** The last 200 lines of the pilot log: ***
[2025-11-06 02:52:38]  mtime=0
[2025-11-06 02:52:38]  protocol_id=None
[2025-11-06 02:52:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-11-06 02:52:38]  replicas=None
[2025-11-06 02:52:38]  scope=mc23_13p6TeV
[2025-11-06 02:52:38]  status=None
[2025-11-06 02:52:38]  status_code=0
[2025-11-06 02:52:38]  storage_token=
[2025-11-06 02:52:38]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6873882122/log.47240594._000206.job.log.tgz.1
[2025-11-06 02:52:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/b4/log.47240594._000206.job.log.tgz.1
[2025-11-06 02:52:38]  workdir=None
[2025-11-06 02:52:38] ]
[2025-11-06 02:52:38] 2025-11-06 09:51:51,284 | INFO     | transferring file log.47240594._000206.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882122/log.47240594._000206.job.log.tgz.1 to /var/lib/boinc
[2025-11-06 02:52:38] 2025-11-06 09:51:51,284 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882122/log.47240594._000206.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.472405
[2025-11-06 02:52:38] 2025-11-06 09:51:51,292 | INFO     | adding to output.list: log.47240594._000206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/b4/log.47240594._000206.job.log.tg
[2025-11-06 02:52:38] 2025-11-06 09:51:51,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-11-06 02:52:38] 2025-11-06 09:51:51,292 | INFO     | summary of transferred files:
[2025-11-06 02:52:38] 2025-11-06 09:51:51,292 | INFO     |  -- lfn=log.47240594._000206.job.log.tgz.1, status_code=0, status=transferred
[2025-11-06 02:52:38] 2025-11-06 09:51:51,292 | INFO     | stage-out finished correctly
[2025-11-06 02:52:38] 2025-11-06 09:51:51,293 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 02:52:38] 2025-11-06 09:51:51,313 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | job 6873882122 has state=finished
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | preparing for final server update for job 6873882122 in state='finished'
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | this job has now completed (state=finished)
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | log transfer has been attempted: DONE
[2025-11-06 02:52:38] 2025-11-06 09:51:51,352 | INFO     | job 6873882122 has finished - writing final server update
[2025-11-06 02:52:38] 2025-11-06 09:51:51,353 | INFO     | total number of processed events: 400 (read)
[2025-11-06 02:52:38] 2025-11-06 09:51:51,353 | INFO     | executing command: lscpu
[2025-11-06 02:52:38] 2025-11-06 09:51:51,366 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-06 02:52:38] 2025-11-06 09:51:52,638 | INFO     | time since job start (2003s) is within the limit (172800.0s)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,889 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-06 02:52:38] 2025-11-06 09:51:52,891 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3870.0093750000015
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882122/memory_monitor_summary.json (trf name=prmon)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | INFO     | extracted standard info from prmon json
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | INFO     | extracted standard memory fields from prmon json
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-06 02:52:38] 2025-11-06 09:51:52,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | fitting pss+swap vs Time
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | sum of square deviations: 5441962.5
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | sum of deviations: -1035953758.5
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | mean x: 1762421793.5
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | mean y: 2844250.576923077
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | intersect: 335504509511.7094
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | chi2: 0.010212593647580518
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | current memory leak: -190.36 B/s (using 26 data points, chi2=0.01)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | could have reported an average CPU frequency of 3987 MHz (5 samples)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | ..............................
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . Timing measurements:
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . get job = 0 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . initial setup = 2 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . payload setup = 2 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . stage-in = 0 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . payload execution = 1983 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . stage-out = 0 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | . log creation = 0 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,894 | INFO     | ..............................
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | 
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | job summary report
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | --------------------------------------------------
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | PanDA job id: 6873882122
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | task id: 47240594
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | errors: (none)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | pilot state: finished 
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | transexitcode: 0
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | exeerrorcode: 0
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | exeerrordiag: 
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | exitcode: 0
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | exitmsg: OK
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | cpuconsumptiontime: 14785 s
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | nevents: 400
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | neventsw: 0
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | pid: 628633
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | pgrp: 628633
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | corecount: 8
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | event service: False
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | sizes: {0: 2348988, 2: 2349250, 11: 2349278, 1989: 2374307, 1990: 2383375, 1991: 2383545}
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | --------------------------------------------------
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | 
[2025-11-06 02:52:38] 2025-11-06 09:51:52,919 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | job 6873882122 has completed (purged errors)
[2025-11-06 02:52:38] 2025-11-06 09:51:52,930 | INFO     | overall cleanup function is called
[2025-11-06 02:52:38] 2025-11-06 09:51:53,936 | INFO     | --- collectZombieJob: --- 10, [628633]
[2025-11-06 02:52:38] 2025-11-06 09:51:53,937 | INFO     | zombie collector waiting for pid 628633
[2025-11-06 02:52:38] 2025-11-06 09:51:53,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-06 02:52:38] 2025-11-06 09:51:53,937 | INFO     | collected zombie processes
[2025-11-06 02:52:38] 2025-11-06 09:51:53,937 | INFO     | will attempt to kill all subprocesses of pid=628633
[2025-11-06 02:52:38] 2025-11-06 09:51:53,975 | INFO     | process IDs to be killed: [628633] (in reverse order)
[2025-11-06 02:52:38] 2025-11-06 09:51:53,998 | WARNING  | found no corresponding commands to process id(s)
[2025-11-06 02:52:38] 2025-11-06 09:51:53,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-06 02:52:38] 2025-11-06 09:51:54,001 | INFO     | did not find any defunct processes belonging to 628633
[2025-11-06 02:52:38] 2025-11-06 09:51:54,003 | INFO     | did not find any defunct processes belonging to 628633
[2025-11-06 02:52:38] 2025-11-06 09:51:54,003 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 02:52:38] 2025-11-06 09:51:54,003 | INFO     | ready for new job
[2025-11-06 02:52:38] 2025-11-06 09:51:54,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-06 02:52:38] 2025-11-06 09:51:54,004 | INFO     | ***************************************
[2025-11-06 02:52:38] 2025-11-06 09:51:54,004 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-06 02:52:38] 2025-11-06 09:51:54,004 | INFO     | ***************************************
[2025-11-06 02:52:38] 2025-11-06 09:51:54,004 | INFO     | 
[2025-11-06 02:52:38] 2025-11-06 09:51:54,005 | INFO     | architecture information:
[2025-11-06 02:52:38] 2025-11-06 09:51:54,005 | INFO     | executing command: cat /etc/os-release
[2025-11-06 02:52:38] 2025-11-06 09:51:54,012 | INFO     | cat /etc/os-release:
[2025-11-06 02:52:38] NAME="CentOS Linux"
[2025-11-06 02:52:38] VERSION="7 (Core)"
[2025-11-06 02:52:38] ID="centos"
[2025-11-06 02:52:38] ID_LIKE="rhel fedora"
[2025-11-06 02:52:38] VERSION_ID="7"
[2025-11-06 02:52:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-06 02:52:38] ANSI_COLOR="0;31"
[2025-11-06 02:52:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-06 02:52:38] HOME_URL="https://www.centos.org/"
[2025-11-06 02:52:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-06 02:52:38] 
[2025-11-06 02:52:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-06 02:52:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-06 02:52:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-06 02:52:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-06 02:52:38] 
[2025-11-06 02:52:38] 2025-11-06 09:51:54,012 | INFO     | ***************************************
[2025-11-06 02:52:38] 2025-11-06 09:51:54,515 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | INFO     | sufficient remaining disk space (677783797760 B)
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | INFO     | current server update state: UPDATING_FINAL
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | INFO     | update_server=False
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-06 02:52:38] 2025-11-06 09:51:54,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-06 02:52:38] 2025-11-06 09:51:54,524 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-06 02:52:38] 2025-11-06 09:51:54,524 | INFO     | found 0 job(s) in 20 queues
[2025-11-06 02:52:38] 2025-11-06 09:51:54,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-06 02:52:38] 2025-11-06 09:51:54,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-06 02:52:38] 2025-11-06 09:51:55,403 | INFO     | all data control threads have been joined
[2025-11-06 02:52:38] 2025-11-06 09:51:55,529 | INFO     | [job] retrieve thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:55,529 | INFO     | [job] queue monitor thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:55,596 | INFO     | [payload] failed_post thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:55,968 | INFO     | all job control threads have been joined
[2025-11-06 02:52:38] 2025-11-06 09:51:55,973 | INFO     | all payload control threads have been joined
[2025-11-06 02:52:38] 2025-11-06 09:51:56,404 | INFO     | [data] control thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,529 | INFO     | [data] copytool_out thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,547 | INFO     | [payload] execute_payloads thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,672 | INFO     | [job] validate thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,705 | INFO     | [job] create_data_payload thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,771 | INFO     | [payload] validate_pre thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,870 | INFO     | [payload] validate_post thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,912 | INFO     | [data] copytool_in thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,942 | WARNING  | process 628633 can no longer be monitored (due to stat problems) - aborting
[2025-11-06 02:52:38] 2025-11-06 09:51:56,969 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-06 02:52:38] 2025-11-06 09:51:56,974 | INFO     | [job] control thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:56,978 | INFO     | [payload] control thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:51:57,008 | INFO     | number of running child processes to parent process 628633: 1
[2025-11-06 02:52:38] 2025-11-06 09:51:57,008 | INFO     | maximum number of monitored processes: 6
[2025-11-06 02:52:38] 2025-11-06 09:51:57,008 | INFO     | aborting job monitoring since job object (job id=6873882122) has expired
[2025-11-06 02:52:38] 2025-11-06 09:51:57,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-06 02:52:38] 2025-11-06 09:51:57,008 | INFO     | will abort loop
[2025-11-06 02:52:38] 2025-11-06 09:51:57,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-06 02:52:38] 2025-11-06 09:51:58,013 | INFO     | [job] job monitor thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:52:01,360 | INFO     | [data] queue_monitor thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:52:05,436 | INFO     | job.realtimelogging is not enabled
[2025-11-06 02:52:38] 2025-11-06 09:52:06,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-06 02:52:38] 2025-11-06 09:52:31,869 | INFO     | [monitor] cgroup control has ended
[2025-11-06 02:52:38] 2025-11-06 09:52:33,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130474019727168)>', '<ExcThread(monitor, started 130473644787456)>']
[2025-11-06 02:52:38] 2025-11-06 09:52:33,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-06 02:52:38] 2025-11-06 09:52:33,712 | INFO     | [monitor] control thread has ended
[2025-11-06 02:52:38] 2025-11-06 09:52:38,454 | INFO     | all workflow threads have been joined
[2025-11-06 02:52:38] 2025-11-06 09:52:38,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-06 02:52:38] 2025-11-06 09:52:38,454 | INFO     | traces error code: 0
[2025-11-06 02:52:38] 2025-11-06 09:52:38,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-06 02:52:38] 2025-11-06 09:52:38,489 [wrapper] ==== pilot stdout END ====
[2025-11-06 02:52:38] 2025-11-06 09:52:38,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-06 02:52:38] 2025-11-06 09:52:38,491 [wrapper] pilotpid: 621975
[2025-11-06 02:52:38] 2025-11-06 09:52:38,493 [wrapper] Pilot exit status: 0
[2025-11-06 02:52:38] 2025-11-06 09:52:38,497 [wrapper] pandaids: 6873882122
[2025-11-06 02:52:38] 2025-11-06 09:52:38,511 [wrapper] cleanup supervisor_pilot  655196 621976
[2025-11-06 02:52:38] 2025-11-06 09:52:38,512 [wrapper] Test setup, not cleaning
[2025-11-06 02:52:38] 2025-11-06 09:52:38,513 [wrapper] apfmon messages muted
[2025-11-06 02:52:38] 2025-11-06 09:52:38,514 [wrapper] ==== wrapper stdout END ====
[2025-11-06 02:52:38] 2025-11-06 09:52:38,515 [wrapper] ==== wrapper stderr END ====
[2025-11-06 02:52:38]  *** Error codes and diagnostics ***
[2025-11-06 02:52:38]     "exeErrorCode": 0,
[2025-11-06 02:52:38]     "exeErrorDiag": "",
[2025-11-06 02:52:38]     "pilotErrorCode": 0,
[2025-11-06 02:52:38]     "pilotErrorDiag": "",
[2025-11-06 02:52:38]  *** Listing of results directory ***
[2025-11-06 02:52:38] total 469316
[2025-11-06 02:52:38] -rwx------ 1 boinc boinc     36292 Nov  6 01:41 runpilot2-wrapper.sh
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc      5112 Nov  6 01:41 queuedata.json
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc    576529 Nov  6 01:41 pilot3.tar.gz
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc       100 Nov  6 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-06 02:52:38] -rwxr-xr-x 1 boinc boinc      7986 Nov  6 02:18 run_atlas
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc       105 Nov  6 02:18 job.xml
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc     15120 Nov  6 02:18 start_atlas.sh
[2025-11-06 02:52:38] drwxrwx--x 2 boinc boinc      4096 Nov  6 02:18 shared
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc    589943 Nov  6 02:18 input.tar.gz
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc      9912 Nov  6 02:18 init_data.xml
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc 277867438 Nov  6 02:18 EVNT.47240566._000004.pool.root.1
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc         0 Nov  6 02:18 boinc_lockfile
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc      2599 Nov  6 02:18 pandaJob.out
[2025-11-06 02:52:38] -rw------- 1 boinc boinc    985767 Nov  6 02:18 agis_schedconf.cvmfs.json
[2025-11-06 02:52:38] -rw------- 1 boinc boinc   1560632 Nov  6 02:18 agis_ddmendpoints.agis.ALL.json
[2025-11-06 02:52:38] drwx------ 5 boinc boinc      4096 Nov  6 02:18 pilot3
[2025-11-06 02:52:38] -rw------- 1 boinc boinc 197527495 Nov  6 02:51 HITS.47240594._000206.pool.root.1
[2025-11-06 02:52:38] -rw------- 1 boinc boinc        95 Nov  6 02:51 pilot_heartbeat.json
[2025-11-06 02:52:38] -rw------- 1 boinc boinc      1020 Nov  6 02:51 memory_monitor_summary.json
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc       529 Nov  6 02:51 boinc_task_state.xml
[2025-11-06 02:52:38] -rw------- 1 boinc boinc    278315 Nov  6 02:51 log.47240594._000206.job.log.tgz.1
[2025-11-06 02:52:38] -rw------- 1 boinc boinc      7726 Nov  6 02:51 heartbeat.json
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc      8192 Nov  6 02:52 boinc_mmap_file
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc        27 Nov  6 02:52 wrapper_checkpoint.txt
[2025-11-06 02:52:38] -rw------- 1 boinc boinc      5158 Nov  6 02:52 pilotlog.txt
[2025-11-06 02:52:38] -rw------- 1 boinc boinc    336513 Nov  6 02:52 log.47240594._000206.job.log.1
[2025-11-06 02:52:38] -rw------- 1 boinc boinc       357 Nov  6 02:52 output.list
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc       620 Nov  6 02:52 runtime_log
[2025-11-06 02:52:38] -rw------- 1 boinc boinc    634880 Nov  6 02:52 result.tar.gz
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc      8786 Nov  6 02:52 runtime_log.err
[2025-11-06 02:52:38] -rw------- 1 boinc boinc       651 Nov  6 02:52 DorKDmwjAb8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLGJODmeywZdm.diag
[2025-11-06 02:52:38] -rw-r--r-- 1 boinc boinc     22026 Nov  6 02:52 stderr.txt
[2025-11-06 02:52:38] HITS file was successfully produced:
[2025-11-06 02:52:38] -rw------- 1 boinc boinc 197527495 Nov  6 02:51 shared/HITS.pool.root.1
[2025-11-06 02:52:38]  *** Contents of shared directory: ***
[2025-11-06 02:52:38] total 465480
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc     15120 Nov  6 02:18 start_atlas.sh
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc    589943 Nov  6 02:18 input.tar.gz
[2025-11-06 02:52:38] -rw-r--r-- 2 boinc boinc 277867438 Nov  6 02:18 ATLAS.root_0
[2025-11-06 02:52:38] -rw------- 1 boinc boinc 197527495 Nov  6 02:51 HITS.pool.root.1
[2025-11-06 02:52:38] -rw------- 1 boinc boinc    634880 Nov  6 02:52 result.tar.gz
02:52:40 (618117): run_atlas exited; CPU time 14791.831084
02:52:40 (618117): called boinc_finish(0)

</stderr_txt>
]]>

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