Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
03:19:02 (699490): wrapper (7.7.26015): starting
03:19:02 (699490): wrapper: running run_atlas (--nthreads 8)
[2025-11-06 03:19:02] Arguments: --nthreads 8
[2025-11-06 03:19:02] Threads: 8
[2025-11-06 03:19:02] Checking for CVMFS
[2025-11-06 03:19:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 03:19:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 03:19:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 03:19:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 03:19:02] 2.13.3.0 559165 96 49008 152534 0 57 1690800 4096000 922 130560 0 395116 99.991 9461 657 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-06 03:19:02] CVMFS is ok
[2025-11-06 03:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 03:19:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-06 03:19:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-06 03:19:02] Further information can be found at the LHC@home message board.
[2025-11-06 03:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 03:19:02] Checking for apptainer binary...
[2025-11-06 03:19:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 03:19:02] Running /usr/bin/apptainer --version
[2025-11-06 03:19:02] apptainer version 1.4.4
[2025-11-06 03:19:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 03:19:02] garage
[2025-11-06 03:19:02] apptainer works
[2025-11-06 03:19:02] Set ATHENA_PROC_NUMBER=8
[2025-11-06 03:19:02] Set ATHENA_CORE_NUMBER=8
[2025-11-06 03:19:02] Starting ATLAS job with PandaID=6873882119
[2025-11-06 03:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-06 03:53:17]  *** The last 200 lines of the pilot log: ***
[2025-11-06 03:53:17]  protocol_id=None
[2025-11-06 03:53:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-11-06 03:53:17]  replicas=None
[2025-11-06 03:53:17]  scope=mc23_13p6TeV
[2025-11-06 03:53:17]  status=None
[2025-11-06 03:53:17]  status_code=0
[2025-11-06 03:53:17]  storage_token=
[2025-11-06 03:53:17]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6873882119/log.47240594._000203.job.log.tgz.1
[2025-11-06 03:53:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/86/log.47240594._000203.job.log.tgz.1
[2025-11-06 03:53:17]  workdir=None
[2025-11-06 03:53:17] ]
[2025-11-06 03:53:17] 2025-11-06 10:52:22,482 | INFO     | transferring file log.47240594._000203.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882119/log.47240594._000203.job.log.tgz.1 to /var/lib/boinc
[2025-11-06 03:53:17] 2025-11-06 10:52:22,482 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882119/log.47240594._000203.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.472405
[2025-11-06 03:53:17] 2025-11-06 10:52:22,489 | INFO     | adding to output.list: log.47240594._000203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/86/log.47240594._000203.job.log.tg
[2025-11-06 03:53:17] 2025-11-06 10:52:22,489 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-11-06 03:53:17] 2025-11-06 10:52:22,489 | INFO     | summary of transferred files:
[2025-11-06 03:53:17] 2025-11-06 10:52:22,489 | INFO     |  -- lfn=log.47240594._000203.job.log.tgz.1, status_code=0, status=transferred
[2025-11-06 03:53:17] 2025-11-06 10:52:22,489 | INFO     | stage-out finished correctly
[2025-11-06 03:53:17] 2025-11-06 10:52:22,490 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 03:53:17] 2025-11-06 10:52:23,545 | INFO     | time since job start (1994s) is within the limit (172800.0s)
[2025-11-06 03:53:17] 2025-11-06 10:52:24,898 | INFO     | monitor loop #155: job 0:6873882119 is in state 'finished'
[2025-11-06 03:53:17] 2025-11-06 10:52:24,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-06 03:53:17] 2025-11-06 10:52:25,550 | INFO     | time since job start (1996s) is within the limit (172800.0s)
[2025-11-06 03:53:17] 2025-11-06 10:52:25,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | job 6873882119 has state=finished
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | preparing for final server update for job 6873882119 in state='finished'
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | this job has now completed (state=finished)
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | log transfer has been attempted: DONE
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | job 6873882119 has finished - writing final server update
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | total number of processed events: 400 (read)
[2025-11-06 03:53:17] 2025-11-06 10:52:25,882 | INFO     | executing command: lscpu
[2025-11-06 03:53:17] 2025-11-06 10:52:25,897 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-06 03:53:17] 2025-11-06 10:52:27,401 | INFO     | monitor loop #156: job 0:6873882119 is in state 'finished'
[2025-11-06 03:53:17] 2025-11-06 10:52:27,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,552 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-06 03:53:17] 2025-11-06 10:52:27,554 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3713.0951562499995
[2025-11-06 03:53:17] 2025-11-06 10:52:27,555 | INFO     | time since job start (1998s) is within the limit (172800.0s)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,557 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6873882119/memory_monitor_summary.json (trf name=prmon)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,557 | INFO     | extracted standard info from prmon json
[2025-11-06 03:53:17] 2025-11-06 10:52:27,557 | INFO     | extracted standard memory fields from prmon json
[2025-11-06 03:53:17] 2025-11-06 10:52:27,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-06 03:53:17] 2025-11-06 10:52:27,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | fitting pss+swap vs Time
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | sum of square deviations: 5441962.5
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | sum of deviations: -794409313.5
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | mean x: 1762425433.5
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | mean y: 2801869.269230769
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | intersect: 257278955227.85538
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | chi2: 0.011073999485942003
[2025-11-06 03:53:17] 2025-11-06 10:52:27,558 | INFO     | current memory leak: -145.98 B/s (using 26 data points, chi2=0.01)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | could have reported an average CPU frequency of 4256 MHz (5 samples)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | ..............................
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . Timing measurements:
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . get job = 0 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . initial setup = 2 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . payload setup = 2 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . stage-in = 0 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . payload execution = 1975 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . stage-out = 0 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | . log creation = 0 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,559 | INFO     | ..............................
[2025-11-06 03:53:17] 2025-11-06 10:52:27,600 | INFO     | 
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | job summary report
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | --------------------------------------------------
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | PanDA job id: 6873882119
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | task id: 47240594
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | errors: (none)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | pilot state: finished 
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | transexitcode: 0
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | exeerrorcode: 0
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | exeerrordiag: 
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | exitcode: 0
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | exitmsg: OK
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | cpuconsumptiontime: 14730 s
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | nevents: 400
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | neventsw: 0
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | pid: 709999
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | pgrp: 709999
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | corecount: 8
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | event service: False
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | sizes: {0: 2348986, 1: 2349248, 10: 2349276, 1980: 2374304, 1981: 2383316, 1984: 2383372, 1986: 2383726}
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | --------------------------------------------------
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | 
[2025-11-06 03:53:17] 2025-11-06 10:52:27,601 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | job 6873882119 has completed (purged errors)
[2025-11-06 03:53:17] 2025-11-06 10:52:27,611 | INFO     | overall cleanup function is called
[2025-11-06 03:53:17] 2025-11-06 10:52:28,618 | INFO     | --- collectZombieJob: --- 10, [709999]
[2025-11-06 03:53:17] 2025-11-06 10:52:28,618 | INFO     | zombie collector waiting for pid 709999
[2025-11-06 03:53:17] 2025-11-06 10:52:28,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-06 03:53:17] 2025-11-06 10:52:28,618 | INFO     | collected zombie processes
[2025-11-06 03:53:17] 2025-11-06 10:52:28,618 | INFO     | will attempt to kill all subprocesses of pid=709999
[2025-11-06 03:53:17] 2025-11-06 10:52:28,656 | INFO     | process IDs to be killed: [709999] (in reverse order)
[2025-11-06 03:53:17] 2025-11-06 10:52:28,677 | WARNING  | found no corresponding commands to process id(s)
[2025-11-06 03:53:17] 2025-11-06 10:52:28,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-06 03:53:17] 2025-11-06 10:52:28,679 | INFO     | did not find any defunct processes belonging to 709999
[2025-11-06 03:53:17] 2025-11-06 10:52:28,680 | INFO     | did not find any defunct processes belonging to 709999
[2025-11-06 03:53:17] 2025-11-06 10:52:28,680 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-06 03:53:17] 2025-11-06 10:52:28,680 | INFO     | ready for new job
[2025-11-06 03:53:17] 2025-11-06 10:52:28,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-06 03:53:17] 2025-11-06 10:52:28,681 | INFO     | ***************************************
[2025-11-06 03:53:17] 2025-11-06 10:52:28,681 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-06 03:53:17] 2025-11-06 10:52:28,681 | INFO     | ***************************************
[2025-11-06 03:53:17] 2025-11-06 10:52:28,681 | INFO     | 
[2025-11-06 03:53:17] 2025-11-06 10:52:28,682 | INFO     | architecture information:
[2025-11-06 03:53:17] 2025-11-06 10:52:28,682 | INFO     | executing command: cat /etc/os-release
[2025-11-06 03:53:17] 2025-11-06 10:52:28,688 | INFO     | cat /etc/os-release:
[2025-11-06 03:53:17] NAME="CentOS Linux"
[2025-11-06 03:53:17] VERSION="7 (Core)"
[2025-11-06 03:53:17] ID="centos"
[2025-11-06 03:53:17] ID_LIKE="rhel fedora"
[2025-11-06 03:53:17] VERSION_ID="7"
[2025-11-06 03:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-06 03:53:17] ANSI_COLOR="0;31"
[2025-11-06 03:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-06 03:53:17] HOME_URL="https://www.centos.org/"
[2025-11-06 03:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-06 03:53:17] 
[2025-11-06 03:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-06 03:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-06 03:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-06 03:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-06 03:53:17] 
[2025-11-06 03:53:17] 2025-11-06 10:52:28,688 | INFO     | ***************************************
[2025-11-06 03:53:17] 2025-11-06 10:52:29,191 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | INFO     | sufficient remaining disk space (678883753984 B)
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | INFO     | current server update state: UPDATING_FINAL
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | INFO     | update_server=False
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | INFO     | aborting loop
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | INFO     | found 0 job(s) in 20 queues
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-06 03:53:17] 2025-11-06 10:52:29,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-06 03:53:17] 2025-11-06 10:52:29,246 | INFO     | all payload control threads have been joined
[2025-11-06 03:53:17] 2025-11-06 10:52:29,361 | INFO     | all data control threads have been joined
[2025-11-06 03:53:17] 2025-11-06 10:52:30,202 | INFO     | [job] job monitor thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,202 | INFO     | [job] retrieve thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,203 | INFO     | [job] queue monitor thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,251 | INFO     | all job control threads have been joined
[2025-11-06 03:53:17] 2025-11-06 10:52:30,251 | INFO     | [payload] control thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,256 | INFO     | [data] copytool_in thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,366 | INFO     | [data] control thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:30,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-06 03:53:17] 2025-11-06 10:52:30,638 | INFO     | [payload] execute_payloads thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,187 | INFO     | [payload] validate_post thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,256 | INFO     | [job] control thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,585 | INFO     | [job] validate thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,590 | INFO     | [payload] validate_pre thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,591 | INFO     | [job] create_data_payload thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,801 | INFO     | [payload] failed_post thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:31,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-06 03:53:17] 2025-11-06 10:52:32,526 | INFO     | [data] copytool_out thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:35,892 | INFO     | [data] queue_monitor thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:52:40,189 | INFO     | job.realtimelogging is not enabled
[2025-11-06 03:53:17] 2025-11-06 10:52:41,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-06 03:53:17] 2025-11-06 10:53:11,295 | INFO     | [monitor] cgroup control has ended
[2025-11-06 03:53:17] 2025-11-06 10:53:12,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137094190040896)>', '<ExcThread(monitor, started 137093743380224)>']
[2025-11-06 03:53:17] 2025-11-06 10:53:13,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-06 03:53:17] 2025-11-06 10:53:13,410 | INFO     | [monitor] control thread has ended
[2025-11-06 03:53:17] 2025-11-06 10:53:17,458 | INFO     | all workflow threads have been joined
[2025-11-06 03:53:17] 2025-11-06 10:53:17,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-06 03:53:17] 2025-11-06 10:53:17,458 | INFO     | traces error code: 0
[2025-11-06 03:53:17] 2025-11-06 10:53:17,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-06 03:53:17] 2025-11-06 10:53:17,499 [wrapper] ==== pilot stdout END ====
[2025-11-06 03:53:17] 2025-11-06 10:53:17,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-06 03:53:17] 2025-11-06 10:53:17,502 [wrapper] pilotpid: 703344
[2025-11-06 03:53:17] 2025-11-06 10:53:17,502 [wrapper] Pilot exit status: 0
[2025-11-06 03:53:17] 2025-11-06 10:53:17,506 [wrapper] pandaids: 6873882119
[2025-11-06 03:53:17] 2025-11-06 10:53:17,519 [wrapper] cleanup supervisor_pilot  736563 703345
[2025-11-06 03:53:17] 2025-11-06 10:53:17,520 [wrapper] Test setup, not cleaning
[2025-11-06 03:53:17] 2025-11-06 10:53:17,521 [wrapper] apfmon messages muted
[2025-11-06 03:53:17] 2025-11-06 10:53:17,522 [wrapper] ==== wrapper stdout END ====
[2025-11-06 03:53:17] 2025-11-06 10:53:17,523 [wrapper] ==== wrapper stderr END ====
[2025-11-06 03:53:17]  *** Error codes and diagnostics ***
[2025-11-06 03:53:17]     "exeErrorCode": 0,
[2025-11-06 03:53:17]     "exeErrorDiag": "",
[2025-11-06 03:53:17]     "pilotErrorCode": 0,
[2025-11-06 03:53:17]     "pilotErrorDiag": "",
[2025-11-06 03:53:17]  *** Listing of results directory ***
[2025-11-06 03:53:17] total 467232
[2025-11-06 03:53:17] -rwx------ 1 boinc boinc     36292 Nov  6 01:41 runpilot2-wrapper.sh
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc      5112 Nov  6 01:41 queuedata.json
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc    576529 Nov  6 01:41 pilot3.tar.gz
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc       100 Nov  6 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-06 03:53:17] -rwxr-xr-x 1 boinc boinc      7986 Nov  6 03:19 run_atlas
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc       105 Nov  6 03:19 job.xml
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc      9912 Nov  6 03:19 init_data.xml
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc 277867438 Nov  6 03:19 EVNT.47240566._000004.pool.root.1
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc     15120 Nov  6 03:19 start_atlas.sh
[2025-11-06 03:53:17] drwxrwx--x 2 boinc boinc      4096 Nov  6 03:19 shared
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc    589939 Nov  6 03:19 input.tar.gz
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc         0 Nov  6 03:19 boinc_lockfile
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc      2598 Nov  6 03:19 pandaJob.out
[2025-11-06 03:53:17] -rw------- 1 boinc boinc    985775 Nov  6 03:19 agis_schedconf.cvmfs.json
[2025-11-06 03:53:17] -rw------- 1 boinc boinc   1560632 Nov  6 03:19 agis_ddmendpoints.agis.ALL.json
[2025-11-06 03:53:17] drwx------ 5 boinc boinc      4096 Nov  6 03:19 pilot3
[2025-11-06 03:53:17] -rw------- 1 boinc boinc 195399604 Nov  6 03:52 HITS.47240594._000203.pool.root.1
[2025-11-06 03:53:17] -rw------- 1 boinc boinc        95 Nov  6 03:52 pilot_heartbeat.json
[2025-11-06 03:53:17] -rw------- 1 boinc boinc      1019 Nov  6 03:52 memory_monitor_summary.json
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc       529 Nov  6 03:52 boinc_task_state.xml
[2025-11-06 03:53:17] -rw------- 1 boinc boinc    274960 Nov  6 03:52 log.47240594._000203.job.log.tgz.1
[2025-11-06 03:53:17] -rw------- 1 boinc boinc      7725 Nov  6 03:52 heartbeat.json
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc      8192 Nov  6 03:52 boinc_mmap_file
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc        27 Nov  6 03:52 wrapper_checkpoint.txt
[2025-11-06 03:53:17] -rw------- 1 boinc boinc      4632 Nov  6 03:53 pilotlog.txt
[2025-11-06 03:53:17] -rw------- 1 boinc boinc    335864 Nov  6 03:53 log.47240594._000203.job.log.1
[2025-11-06 03:53:17] -rw------- 1 boinc boinc       357 Nov  6 03:53 output.list
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc       620 Nov  6 03:53 runtime_log
[2025-11-06 03:53:17] -rw------- 1 boinc boinc    634880 Nov  6 03:53 result.tar.gz
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc      8786 Nov  6 03:53 runtime_log.err
[2025-11-06 03:53:17] -rw------- 1 boinc boinc       651 Nov  6 03:53 ivnKDmwjAb8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIGJODmmajrgm.diag
[2025-11-06 03:53:17] -rw-r--r-- 1 boinc boinc     22128 Nov  6 03:53 stderr.txt
[2025-11-06 03:53:17] HITS file was successfully produced:
[2025-11-06 03:53:17] -rw------- 1 boinc boinc 195399604 Nov  6 03:52 shared/HITS.pool.root.1
[2025-11-06 03:53:17]  *** Contents of shared directory: ***
[2025-11-06 03:53:17] total 463400
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc 277867438 Nov  6 03:19 ATLAS.root_0
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc     15120 Nov  6 03:19 start_atlas.sh
[2025-11-06 03:53:17] -rw-r--r-- 2 boinc boinc    589939 Nov  6 03:19 input.tar.gz
[2025-11-06 03:53:17] -rw------- 1 boinc boinc 195399604 Nov  6 03:52 HITS.pool.root.1
[2025-11-06 03:53:17] -rw------- 1 boinc boinc    634880 Nov  6 03:53 result.tar.gz
03:53:18 (699490): run_atlas exited; CPU time 14736.653538
03:53:18 (699490): called boinc_finish(0)

</stderr_txt>
]]>

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