Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:31 (759432): wrapper (7.7.26015): starting
19:36:31 (759432): wrapper: running run_atlas (--nthreads 4)
[2025-10-30 19:36:31] Arguments: --nthreads 4
[2025-10-30 19:36:31] Threads: 4
[2025-10-30 19:36:31] Checking for CVMFS
[2025-10-30 19:36:31] No cvmfs_config command found, will try listing directly
[2025-10-30 19:36:31] CVMFS is ok
[2025-10-30 19:36:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-30 19:36:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-30 19:36:31] Further information can be found at the LHC@home message board.
[2025-10-30 19:36:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-30 19:36:31] Checking for apptainer binary...
[2025-10-30 19:36:31] which: no apptainer in ((null))
[2025-10-30 19:36:31] apptainer is not installed, using version from CVMFS
[2025-10-30 19:36:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-30 19:36:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-10-30 19:36:31] apptainer works
[2025-10-30 19:36:31] Set ATHENA_PROC_NUMBER=4
[2025-10-30 19:36:31] Set ATHENA_CORE_NUMBER=4
[2025-10-30 19:36:31] Starting ATLAS job with PandaID=6864840984
[2025-10-30 19:36:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-30 22:29:13]  *** The last 200 lines of the pilot log: ***
[2025-10-30 22:29:13] 2025-10-30 21:27:04,821 | INFO     | PID=763209 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-30 22:29:13] 2025-10-30 21:27:04,821 | INFO     | .. there are 5 such processes running
[2025-10-30 22:29:13] 2025-10-30 21:27:05,645 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-30 22:29:13] 2025-10-30 21:27:05,654 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2643.4108593749993
[2025-10-30 22:29:13] 2025-10-30 21:27:05,666 | INFO     | using path: /scratch/boinc/var/slot52/slots/1/PanDA_Pilot-6864840984/memory_monitor_summary.json (trf name=prmon)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,667 | INFO     | extracted standard info from prmon json
[2025-10-30 22:29:13] 2025-10-30 21:27:05,667 | INFO     | extracted standard memory fields from prmon json
[2025-10-30 22:29:13] 2025-10-30 21:27:05,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-30 22:29:13] 2025-10-30 21:27:05,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-30 22:29:13] 2025-10-30 21:27:05,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-30 22:29:13] 2025-10-30 21:27:05,671 | INFO     | fitting pss+swap vs Time
[2025-10-30 22:29:13] 2025-10-30 21:27:05,671 | INFO     | sum of square deviations: 1444149868.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,672 | INFO     | sum of deviations: 5218346320.999998
[2025-10-30 22:29:13] 2025-10-30 21:27:05,672 | INFO     | mean x: 1761854496.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,672 | INFO     | mean y: 2342039.4431137727
[2025-10-30 22:29:13] 2025-10-30 21:27:05,673 | INFO     | -- intersect: -6364010325.406396
[2025-10-30 22:29:13] 2025-10-30 21:27:05,673 | INFO     | intersect: -6364010325.406396
[2025-10-30 22:29:13] 2025-10-30 21:27:05,673 | INFO     | chi2: 1.4047494287870963
[2025-10-30 22:29:13] 2025-10-30 21:27:05,673 | INFO     | sum of square deviations: 1318277740.5
[2025-10-30 22:29:13] 2025-10-30 21:27:05,674 | INFO     | sum of deviations: 5431444971.500001
[2025-10-30 22:29:13] 2025-10-30 21:27:05,674 | INFO     | mean x: 1761854343.5
[2025-10-30 22:29:13] 2025-10-30 21:27:05,674 | INFO     | mean y: 2342297.6975308643
[2025-10-30 22:29:13] 2025-10-30 21:27:05,674 | INFO     | -- intersect: -7256685614.651955
[2025-10-30 22:29:13] 2025-10-30 21:27:05,674 | INFO     | intersect: -7256685614.651955
[2025-10-30 22:29:13] 2025-10-30 21:27:05,675 | INFO     | chi2: 1.4059306428725962
[2025-10-30 22:29:13] 2025-10-30 21:27:05,675 | INFO     | current chi2=1.4059306428725962 (change=-0.08408717322061968 %)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,675 | INFO     | right removable region: 161
[2025-10-30 22:29:13] 2025-10-30 21:27:05,675 | INFO     | sum of square deviations: 1318277740.5
[2025-10-30 22:29:13] 2025-10-30 21:27:05,676 | INFO     | sum of deviations: -16465761293.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,676 | INFO     | mean x: 1761854648.5
[2025-10-30 22:29:13] 2025-10-30 21:27:05,676 | INFO     | mean y: 2367891.938271605
[2025-10-30 22:29:13] 2025-10-30 21:27:05,676 | INFO     | -- intersect: 22008563691.133305
[2025-10-30 22:29:13] 2025-10-30 21:27:05,677 | INFO     | intersect: 22008563691.133305
[2025-10-30 22:29:13] 2025-10-30 21:27:05,677 | INFO     | chi2: 0.014749673604272288
[2025-10-30 22:29:13] 2025-10-30 21:27:05,677 | INFO     | current chi2=0.014749673604272288 (change=98.95001390981112 %)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,677 | INFO     | sum of square deviations: 1199940638.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,678 | INFO     | sum of deviations: -14877926108.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,678 | INFO     | mean x: 1761854801.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,678 | INFO     | mean y: 2365841.108280255
[2025-10-30 22:29:13] 2025-10-30 21:27:05,678 | INFO     | -- intersect: 21847401097.179874
[2025-10-30 22:29:13] 2025-10-30 21:27:05,678 | INFO     | intersect: 21847401097.179874
[2025-10-30 22:29:13] 2025-10-30 21:27:05,679 | INFO     | chi2: 0.01466686912895918
[2025-10-30 22:29:13] 2025-10-30 21:27:05,679 | INFO     | current chi2=0.01466686912895918 (change=0.5613986962336869 %)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,679 | INFO     | left removable region: 20
[2025-10-30 22:29:13] 2025-10-30 21:27:05,679 | INFO     | sum of square deviations: 869188390.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | sum of deviations: -10756615987.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | mean x: 1761854923.0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | mean y: 2362239.780141844
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | -- intersect: 21806147298.98515
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | intersect: 21806147298.98515
[2025-10-30 22:29:13] 2025-10-30 21:27:05,680 | INFO     | chi2: 0.012738837563466169
[2025-10-30 22:29:13] 2025-10-30 21:27:05,681 | INFO     | -- intersect: 21806147298.98515
[2025-10-30 22:29:13] 2025-10-30 21:27:05,681 | INFO     | current memory leak: -12.38 B/s (using 141 data points, chi2=0.01)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,681 | INFO     | could have reported an average CPU frequency of 2619 MHz (9 samples)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,681 | INFO     | ..............................
[2025-10-30 22:29:13] 2025-10-30 21:27:05,681 | INFO     | . Timing measurements:
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . get job = 0 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . initial setup = 1 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . payload setup = 7 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . stage-in = 0 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . payload execution = 10186 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . stage-out = 0 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | . log creation = 0 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,682 | INFO     | ..............................
[2025-10-30 22:29:13] 2025-10-30 21:27:05,776 | INFO     | 
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | job summary report
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | --------------------------------------------------
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | PanDA job id: 6864840984
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | task id: 47081490
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | errors: (none)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | pilot state: finished 
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | transexitcode: 0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,777 | INFO     | exeerrorcode: 0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | exeerrordiag: 
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | exitcode: 0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | exitmsg: OK
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | cpuconsumptiontime: 39121 s
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | nevents: 400
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | neventsw: 0
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | pid: 771038
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | pgrp: 771038
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | corecount: 4
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | event service: False
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | sizes: {0: 2348724, 1: 2348923, 6: 2349185, 11: 2349213, 10197: 2377927, 10198: 2386947, 10199: 2387131, 10206: 2387389}
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | --------------------------------------------------
[2025-10-30 22:29:13] 2025-10-30 21:27:05,778 | INFO     | 
[2025-10-30 22:29:13] 2025-10-30 21:27:05,779 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2025-10-30 22:29:13] 2025-10-30 21:27:05,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-30 22:29:13] 2025-10-30 21:27:05,805 | INFO     | job 6864840984 has completed (purged errors)
[2025-10-30 22:29:13] 2025-10-30 21:27:05,805 | INFO     | overall cleanup function is called
[2025-10-30 22:29:13] 2025-10-30 21:27:06,813 | INFO     | --- collectZombieJob: --- 10, [771038]
[2025-10-30 22:29:13] 2025-10-30 21:27:06,813 | INFO     | zombie collector waiting for pid 771038
[2025-10-30 22:29:13] 2025-10-30 21:27:06,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-30 22:29:13] 2025-10-30 21:27:06,813 | INFO     | collected zombie processes
[2025-10-30 22:29:13] 2025-10-30 21:27:06,813 | INFO     | will attempt to kill all subprocesses of pid=771038
[2025-10-30 22:29:13] 2025-10-30 21:27:07,223 | INFO     | process IDs to be killed: [771038] (in reverse order)
[2025-10-30 22:29:13] 2025-10-30 21:27:07,350 | WARNING  | found no corresponding commands to process id(s)
[2025-10-30 22:29:13] 2025-10-30 21:27:07,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-30 22:29:13] 2025-10-30 21:27:07,365 | INFO     | did not find any defunct processes belonging to 771038
[2025-10-30 22:29:13] 2025-10-30 21:27:07,379 | INFO     | did not find any defunct processes belonging to 771038
[2025-10-30 22:29:13] 2025-10-30 21:27:07,380 | INFO     | ready for new job
[2025-10-30 22:29:13] 2025-10-30 21:27:07,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-30 22:29:13] 2025-10-30 21:27:07,382 | INFO     | ***************************************
[2025-10-30 22:29:13] 2025-10-30 21:27:07,383 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-30 22:29:13] 2025-10-30 21:27:07,383 | INFO     | ***************************************
[2025-10-30 22:29:13] 2025-10-30 21:27:07,383 | INFO     | 
[2025-10-30 22:29:13] 2025-10-30 21:27:07,387 | INFO     | architecture information:
[2025-10-30 22:29:13] 2025-10-30 21:27:07,388 | INFO     | executing command: cat /etc/os-release
[2025-10-30 22:29:13] 2025-10-30 21:27:07,406 | INFO     | cat /etc/os-release:
[2025-10-30 22:29:13] NAME="CentOS Linux"
[2025-10-30 22:29:13] VERSION="7 (Core)"
[2025-10-30 22:29:13] ID="centos"
[2025-10-30 22:29:13] ID_LIKE="rhel fedora"
[2025-10-30 22:29:13] VERSION_ID="7"
[2025-10-30 22:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-30 22:29:13] ANSI_COLOR="0;31"
[2025-10-30 22:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-30 22:29:13] HOME_URL="https://www.centos.org/"
[2025-10-30 22:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-30 22:29:13] 
[2025-10-30 22:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-30 22:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-30 22:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-30 22:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-30 22:29:13] 
[2025-10-30 22:29:13] 2025-10-30 21:27:07,407 | INFO     | ***************************************
[2025-10-30 22:29:13] 2025-10-30 21:27:07,910 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2025-10-30 22:29:13] 2025-10-30 21:27:07,928 | INFO     | sufficient remaining disk space (676429037568 B)
[2025-10-30 22:29:13] 2025-10-30 21:27:07,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-30 22:29:13] 2025-10-30 21:27:07,928 | INFO     | current server update state: UPDATING_FINAL
[2025-10-30 22:29:13] 2025-10-30 21:27:07,928 | INFO     | update_server=False
[2025-10-30 22:29:13] 2025-10-30 21:27:07,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-30 22:29:13] 2025-10-30 21:27:07,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-30 22:29:13] 2025-10-30 21:27:07,995 | INFO     | aborting loop
[2025-10-30 22:29:13] 2025-10-30 21:27:07,998 | INFO     | all data control threads have been joined
[2025-10-30 22:29:13] 2025-10-30 21:27:08,108 | INFO     | all payload control threads have been joined
[2025-10-30 22:29:13] 2025-10-30 21:27:08,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-30 22:29:13] 2025-10-30 21:27:08,934 | INFO     | [job] retrieve thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:08,965 | INFO     | [data] copytool_in thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,000 | INFO     | [job] job monitor thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,003 | INFO     | [data] control thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,087 | INFO     | [payload] validate_post thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,113 | INFO     | [payload] control thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,217 | INFO     | [payload] failed_post thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-30 22:29:13] 2025-10-30 21:27:09,389 | INFO     | all job control threads have been joined
[2025-10-30 22:29:13] 2025-10-30 21:27:09,448 | INFO     | [payload] execute_payloads thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,612 | INFO     | [job] validate thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,628 | INFO     | [job] create_data_payload thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:09,767 | INFO     | [payload] validate_pre thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:10,394 | INFO     | [job] control thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:10,477 | INFO     | [data] copytool_out thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:10,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-30 22:29:13] 2025-10-30 21:27:11,791 | INFO     | [job] queue monitor thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:13,343 | INFO     | [data] queue_monitor thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:18,499 | INFO     | job.realtimelogging is not enabled
[2025-10-30 22:29:13] 2025-10-30 21:27:19,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-30 22:29:13] 2025-10-30 21:27:37,401 | INFO     | PID=763209 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-30 22:29:13] 2025-10-30 21:27:37,401 | INFO     | .. there are 5 such processes running
[2025-10-30 22:29:13] 2025-10-30 21:27:37,402 | INFO     | found 0 job(s) in 20 queues
[2025-10-30 22:29:13] 2025-10-30 21:27:37,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-30 22:29:13] 2025-10-30 21:27:37,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-30 22:29:13] 2025-10-30 21:27:59,388 | INFO     | [monitor] cgroup control has ended
[2025-10-30 22:29:13] 2025-10-30 21:28:01,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22425202784064)>', '<ExcThread(monitor, started 22424485607168)>']
[2025-10-30 22:29:13] 2025-10-30 21:28:01,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-30 22:29:13] 2025-10-30 21:28:01,523 | INFO     | [monitor] control thread has ended
[2025-10-30 22:29:13] 2025-10-30 21:28:06,290 | INFO     | all workflow threads have been joined
[2025-10-30 22:29:13] 2025-10-30 21:28:06,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-30 22:29:13] 2025-10-30 21:28:06,291 | INFO     | traces error code: 0
[2025-10-30 22:29:13] 2025-10-30 21:28:06,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-30 22:29:13] 2025-10-30 21:28:06,449 [wrapper] ==== pilot stdout END ====
[2025-10-30 22:29:13] 2025-10-30 21:28:06,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-30 22:29:13] 2025-10-30 21:28:06,456 [wrapper] pilotpid: 763209
[2025-10-30 22:29:13] 2025-10-30 21:28:06,459 [wrapper] Pilot exit status: 0
[2025-10-30 22:29:13] 2025-10-30 21:28:06,470 [wrapper] pandaids: 6864840984
[2025-10-30 22:29:13] 2025-10-30 21:28:06,558 [wrapper] cleanup supervisor_pilot  976602 763210
[2025-10-30 22:29:13] 2025-10-30 21:28:06,561 [wrapper] Test setup, not cleaning
[2025-10-30 22:29:13] 2025-10-30 21:28:06,564 [wrapper] apfmon messages muted
[2025-10-30 22:29:13] 2025-10-30 21:28:06,568 [wrapper] ==== wrapper stdout END ====
[2025-10-30 22:29:13] 2025-10-30 21:28:06,570 [wrapper] ==== wrapper stderr END ====
[2025-10-30 22:29:13]  *** Error codes and diagnostics ***
[2025-10-30 22:29:13]     "exeErrorCode": 0,
[2025-10-30 22:29:13]     "exeErrorDiag": "",
[2025-10-30 22:29:13]     "pilotErrorCode": 0,
[2025-10-30 22:29:13]     "pilotErrorDiag": "",
[2025-10-30 22:29:13]  *** Listing of results directory ***
[2025-10-30 22:29:13] total 394544
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc      5112 Oct 29 16:36 queuedata.json
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc    557409 Oct 29 16:37 pilot3.tar.gz
[2025-10-30 22:29:13] -rwx------ 1 boinc boinc     36292 Oct 29 16:38 runpilot2-wrapper.sh
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc       100 Oct 30 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-30 22:29:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 30 19:36 run_atlas
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc       105 Oct 30 19:36 job.xml
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc      6633 Oct 30 19:36 init_data.xml
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc 216816450 Oct 30 19:36 EVNT.47081487._000888.pool.root.1
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc     15120 Oct 30 19:36 start_atlas.sh
[2025-10-30 22:29:13] drwxrwx--x 2 boinc boinc      4096 Oct 30 19:36 shared
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc    569669 Oct 30 19:36 input.tar.gz
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc         0 Oct 30 19:36 boinc_lockfile
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc      2525 Oct 30 19:36 pandaJob.out
[2025-10-30 22:29:13] -rw------- 1 boinc boinc    986864 Oct 30 19:36 agis_schedconf.cvmfs.json
[2025-10-30 22:29:13] -rw------- 1 boinc boinc   1560632 Oct 30 19:36 agis_ddmendpoints.agis.ALL.json
[2025-10-30 22:29:13] drwx------ 5 boinc boinc      4096 Oct 30 19:36 pilot3
[2025-10-30 22:29:13] -rw------- 1 boinc boinc 179733041 Oct 30 22:26 HITS.47081490._022120.pool.root.1
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc       529 Oct 30 22:26 boinc_task_state.xml
[2025-10-30 22:29:13] -rw------- 1 boinc boinc      1037 Oct 30 22:26 memory_monitor_summary.json
[2025-10-30 22:29:13] -rw------- 1 boinc boinc    332582 Oct 30 22:26 log.47081490._022120.job.log.tgz.1
[2025-10-30 22:29:13] -rw------- 1 boinc boinc      7836 Oct 30 22:27 heartbeat.json
[2025-10-30 22:29:13] -rw------- 1 boinc boinc        95 Oct 30 22:27 pilot_heartbeat.json
[2025-10-30 22:29:13] -rw------- 1 boinc boinc      4904 Oct 30 22:28 pilotlog.txt
[2025-10-30 22:29:13] -rw------- 1 boinc boinc   1442786 Oct 30 22:28 log.47081490._022120.job.log.1
[2025-10-30 22:29:13] -rw------- 1 boinc boinc       357 Oct 30 22:28 output.list
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc       620 Oct 30 22:28 runtime_log
[2025-10-30 22:29:13] -rw------- 1 boinc boinc   1792000 Oct 30 22:28 result.tar.gz
[2025-10-30 22:29:13] -rw------- 1 boinc boinc       665 Oct 30 22:28 xKdLDmyQNY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLipMDm1O0UTm.diag
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc      9070 Oct 30 22:28 runtime_log.err
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc        26 Oct 30 22:28 wrapper_checkpoint.txt
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc      8192 Oct 30 22:29 boinc_mmap_file
[2025-10-30 22:29:13] -rw-r--r-- 1 boinc boinc     20953 Oct 30 22:29 stderr.txt
[2025-10-30 22:29:13] HITS file was successfully produced:
[2025-10-30 22:29:13] -rw------- 1 boinc boinc 179733041 Oct 30 22:26 shared/HITS.pool.root.1
[2025-10-30 22:29:13]  *** Contents of shared directory: ***
[2025-10-30 22:29:13] total 389592
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc 216816450 Oct 30 19:36 ATLAS.root_0
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc     15120 Oct 30 19:36 start_atlas.sh
[2025-10-30 22:29:13] -rw-r--r-- 2 boinc boinc    569669 Oct 30 19:36 input.tar.gz
[2025-10-30 22:29:13] -rw------- 1 boinc boinc 179733041 Oct 30 22:26 HITS.pool.root.1
[2025-10-30 22:29:13] -rw------- 1 boinc boinc   1792000 Oct 30 22:28 result.tar.gz
22:29:15 (759432): run_atlas exited; CPU time 39540.229255
22:29:15 (759432): called boinc_finish(0)

</stderr_txt>
]]>

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