Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:44 (2209295): wrapper (7.7.26015): starting
14:40:44 (2209295): wrapper: running run_atlas (--nthreads 3)
[2025-10-29 14:40:44] Arguments: --nthreads 3
[2025-10-29 14:40:44] Threads: 3
[2025-10-29 14:40:44] Checking for CVMFS
[2025-10-29 14:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 14:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 14:40:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 14:40:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 14:40:44] 2.9.2.0 2087405 359 61368 152266 1 57 33297739 36864001 0 130560 0 327409 99.986 14992 2394 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 14:40:44] CVMFS is ok
[2025-10-29 14:40:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 14:40:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 14:40:44] Further information can be found at the LHC@home message board.
[2025-10-29 14:40:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 14:40:44] Checking for apptainer binary...
[2025-10-29 14:40:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 14:40:44] Running /usr/bin/apptainer --version
[2025-10-29 14:40:44] apptainer version 1.4.1-1.1
[2025-10-29 14:40:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 14:40:44] magicA161a
[2025-10-29 14:40:44] apptainer works
[2025-10-29 14:40:44] Set ATHENA_PROC_NUMBER=3
[2025-10-29 14:40:44] Set ATHENA_CORE_NUMBER=3
[2025-10-29 14:40:44] Starting ATLAS job with PandaID=6864144843
[2025-10-29 14:40:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 15:56:01]  *** The last 200 lines of the pilot log: ***
[2025-10-29 15:56:01] 2025-10-29 14:54:57,253 | INFO     | [job] queue monitor thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,310 | INFO     | [job] job monitor thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,332 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 15:56:01] 2025-10-29 14:54:57,430 | INFO     | [payload] failed_post thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,627 | INFO     | [data] control thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:57,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 15:56:01] 2025-10-29 14:54:57,951 | INFO     | [payload] validate_post thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:58,020 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:58,029 | INFO     | [payload] control thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:58,119 | INFO     | [job] control thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:58,160 | INFO     | [data] copytool_in thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:58,724 | INFO     | [job] validate thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:54:59,427 | INFO     | [data] copytool_out thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:55:01,846 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:55:06,604 | INFO     | job.realtimelogging is not enabled
[2025-10-29 15:56:01] 2025-10-29 14:55:07,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 15:56:01] 2025-10-29 14:55:26,988 | INFO     | PID=2213018 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 15:56:01] 2025-10-29 14:55:26,988 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 15:56:01] 2025-10-29 14:55:26,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 15:56:01] 2025-10-29 14:55:26,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 15:56:01] 2025-10-29 14:55:48,574 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-29 15:56:01] 2025-10-29 14:55:55,323 | INFO     | [monitor] cgroup control has ended
[2025-10-29 15:56:01] 2025-10-29 14:55:56,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398821013312)>', '<ExcThread(monitor, started 140398548719360)>']
[2025-10-29 15:56:01] 2025-10-29 14:55:57,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 15:56:01] 2025-10-29 14:55:57,147 | INFO     | [monitor] control thread has ended
[2025-10-29 15:56:01] 2025-10-29 14:56:01,521 | INFO     | all workflow threads have been joined
[2025-10-29 15:56:01] 2025-10-29 14:56:01,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 15:56:01] 2025-10-29 14:56:01,521 | INFO     | traces error code: 0
[2025-10-29 15:56:01] 2025-10-29 14:56:01,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 15:56:01] 2025-10-29 14:56:01,570 [wrapper] ==== pilot stdout END ====
[2025-10-29 15:56:01] 2025-10-29 14:56:01,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 15:56:01] 2025-10-29 14:56:01,575 [wrapper] pilotpid: 2213018
[2025-10-29 15:56:01] 2025-10-29 14:56:01,577 [wrapper] Pilot exit status: 0
[2025-10-29 15:56:01] 2025-10-29 14:56:01,584 [wrapper] pandaids: 6864144843
[2025-10-29 15:56:01] 2025-10-29 14:56:01,600 [wrapper] cleanup supervisor_pilot 2233991 2213019
[2025-10-29 15:56:01] 2025-10-29 14:56:01,602 [wrapper] Test setup, not cleaning
[2025-10-29 15:56:01] 2025-10-29 14:56:01,605 [wrapper] apfmon messages muted
[2025-10-29 15:56:01] 2025-10-29 14:56:01,607 [wrapper] ==== wrapper stdout END ====
[2025-10-29 15:56:01] 2025-10-29 14:56:01,609 [wrapper] ==== wrapper stderr END ====
[2025-10-29 15:56:01]  *** Error codes and diagnostics ***
[2025-10-29 15:56:01]     "exeErrorCode": 0,
[2025-10-29 15:56:01]     "exeErrorDiag": "",
[2025-10-29 15:56:01]     "pilotErrorCode": 0,
[2025-10-29 15:56:01]     "pilotErrorDiag": "",
[2025-10-29 15:56:01]  *** Listing of results directory ***
[2025-10-29 15:56:01] total 390452
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc    557409 Oct 29 04:56 pilot3.tar.gz
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      5112 Oct 29 05:13 queuedata.json
[2025-10-29 15:56:01] -rwx------ 1 boinc boinc     36292 Oct 29 05:13 runpilot2-wrapper.sh
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc       100 Oct 29 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 15:56:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 14:40 run_atlas
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc       105 Oct 29 14:40 job.xml
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc 211812636 Oct 29 14:40 EVNT.47081487._000104.pool.root.1
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc    569675 Oct 29 14:40 input.tar.gz
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc     15120 Oct 29 14:40 start_atlas.sh
[2025-10-29 15:56:01] drwxrwx--x 2 boinc boinc      4096 Oct 29 14:40 shared
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc         0 Oct 29 14:40 boinc_setup_complete
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      6448 Oct 29 14:40 init_data.xml
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc         0 Oct 29 14:40 boinc_lockfile
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      2525 Oct 29 14:40 pandaJob.out
[2025-10-29 15:56:01] -rw------- 1 boinc boinc    982988 Oct 29 14:40 agis_schedconf.cvmfs.json
[2025-10-29 15:56:01] -rw------- 1 boinc boinc   1560632 Oct 29 14:40 agis_ddmendpoints.agis.ALL.json
[2025-10-29 15:56:01] drwx------ 5 boinc boinc      4096 Oct 29 14:40 pilot3
[2025-10-29 15:56:01] -rw------- 1 boinc boinc 182288069 Oct 29 15:54 HITS.47081490._002852.pool.root.1
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc       529 Oct 29 15:54 boinc_task_state.xml
[2025-10-29 15:56:01] -rw------- 1 boinc boinc      1016 Oct 29 15:54 memory_monitor_summary.json
[2025-10-29 15:56:01] -rw------- 1 boinc boinc    255961 Oct 29 15:54 log.47081490._002852.job.log.tgz.1
[2025-10-29 15:56:01] -rw------- 1 boinc boinc      7760 Oct 29 15:54 heartbeat.json
[2025-10-29 15:56:01] -rw------- 1 boinc boinc        95 Oct 29 15:55 pilot_heartbeat.json
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc        27 Oct 29 15:55 wrapper_checkpoint.txt
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      8192 Oct 29 15:55 boinc_mmap_file
[2025-10-29 15:56:01] -rw------- 1 boinc boinc      4824 Oct 29 15:56 pilotlog.txt
[2025-10-29 15:56:01] -rw------- 1 boinc boinc    659312 Oct 29 15:56 log.47081490._002852.job.log.1
[2025-10-29 15:56:01] -rw------- 1 boinc boinc       357 Oct 29 15:56 output.list
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc       620 Oct 29 15:56 runtime_log
[2025-10-29 15:56:01] -rw------- 1 boinc boinc    931840 Oct 29 15:56 result.tar.gz
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      8797 Oct 29 15:56 runtime_log.err
[2025-10-29 15:56:01] -rw------- 1 boinc boinc       662 Oct 29 15:56 oTUKDmrjCY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFFFODm3tQUim.diag
[2025-10-29 15:56:01] -rw-r--r-- 1 boinc boinc      6662 Oct 29 15:56 stderr.txt
[2025-10-29 15:56:01] HITS file was successfully produced:
[2025-10-29 15:56:01] -rw------- 1 boinc boinc 182288069 Oct 29 15:54 shared/HITS.pool.root.1
[2025-10-29 15:56:01]  *** Contents of shared directory: ***
[2025-10-29 15:56:01] total 386364
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc 211812636 Oct 29 14:40 ATLAS.root_0
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc    569675 Oct 29 14:40 input.tar.gz
[2025-10-29 15:56:01] -rw-r--r-- 2 boinc boinc     15120 Oct 29 14:40 start_atlas.sh
[2025-10-29 15:56:01] -rw------- 1 boinc boinc 182288069 Oct 29 15:54 HITS.pool.root.1
[2025-10-29 15:56:01] -rw------- 1 boinc boinc    931840 Oct 29 15:56 result.tar.gz
15:56:24 (2209295): run_atlas exited; CPU time 12624.874249
15:56:24 (2209295): called boinc_finish(0)

</stderr_txt>
]]>

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