Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:03:55 (2136112): wrapper (7.7.26015): starting
11:03:55 (2136112): wrapper: running run_atlas (--nthreads 3)
[2025-10-29 11:03:55] Arguments: --nthreads 3
[2025-10-29 11:03:55] Threads: 3
[2025-10-29 11:03:55] Checking for CVMFS
[2025-10-29 11:03:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 11:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 11:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 11:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 11:03:56] 2.9.2.0 2087405 142 51928 152259 1 57 33232877 36864001 0 130560 0 130943 99.983 5514 2592 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 11:03:56] CVMFS is ok
[2025-10-29 11:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 11:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 11:03:56] Further information can be found at the LHC@home message board.
[2025-10-29 11:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 11:03:56] Checking for apptainer binary...
[2025-10-29 11:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 11:03:56] Running /usr/bin/apptainer --version
[2025-10-29 11:03:56] apptainer version 1.4.1-1.1
[2025-10-29 11:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 11:03:56] magicA161a
[2025-10-29 11:03:56] apptainer works
[2025-10-29 11:03:56] Set ATHENA_PROC_NUMBER=3
[2025-10-29 11:03:56] Set ATHENA_CORE_NUMBER=3
[2025-10-29 11:03:56] Starting ATLAS job with PandaID=6864341001
[2025-10-29 11:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 12:17:33]  *** The last 200 lines of the pilot log: ***
[2025-10-29 12:17:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 12:17:33] 
[2025-10-29 12:17:33] 2025-10-29 11:17:02,205 | INFO     | ***************************************
[2025-10-29 12:17:33] 2025-10-29 11:17:02,708 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 12:17:33] 2025-10-29 11:17:02,720 | INFO     | sufficient remaining disk space (372485652480 B)
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | INFO     | update_server=False
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 12:17:33] 2025-10-29 11:17:02,721 | INFO     | aborting loop
[2025-10-29 12:17:33] 2025-10-29 11:17:02,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 12:17:33] 2025-10-29 11:17:02,863 | INFO     | all data control threads have been joined
[2025-10-29 12:17:33] 2025-10-29 11:17:03,046 | INFO     | all job control threads have been joined
[2025-10-29 12:17:33] 2025-10-29 11:17:03,251 | INFO     | all payload control threads have been joined
[2025-10-29 12:17:33] 2025-10-29 11:17:03,726 | INFO     | [job] retrieve thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:03,726 | INFO     | [job] job monitor thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:03,726 | INFO     | [job] queue monitor thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:03,869 | INFO     | [data] control thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,052 | INFO     | [job] control thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,173 | INFO     | [payload] failed_post thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,256 | INFO     | [payload] control thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,550 | INFO     | [data] copytool_in thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,703 | INFO     | [payload] validate_post thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:04,727 | INFO     | [data] copytool_out thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:05,053 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:05,079 | INFO     | [job] validate thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:05,148 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:05,201 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:06,810 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:07,300 | INFO     | [monitor] cgroup control has ended
[2025-10-29 12:17:33] 2025-10-29 11:17:13,420 | INFO     | job.realtimelogging is not enabled
[2025-10-29 12:17:33] 2025-10-29 11:17:14,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 12:17:33] 2025-10-29 11:17:14,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232708507456)>', '<ExcThread(monitor, started 140232217323264)>']
[2025-10-29 12:17:33] 2025-10-29 11:17:19,657 | INFO     | all workflow threads have been joined
[2025-10-29 12:17:33] 2025-10-29 11:17:19,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 12:17:33] 2025-10-29 11:17:19,658 | INFO     | traces error code: 0
[2025-10-29 12:17:33] 2025-10-29 11:17:19,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | INFO     | PID=2139837 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 12:17:33] 2025-10-29 11:17:33,442 | INFO     | [monitor] control thread has ended
[2025-10-29 12:17:33] 2025-10-29 11:17:33,488 [wrapper] ==== pilot stdout END ====
[2025-10-29 12:17:33] 2025-10-29 11:17:33,490 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 12:17:33] 2025-10-29 11:17:33,492 [wrapper] pilotpid: 2139837
[2025-10-29 12:17:33] 2025-10-29 11:17:33,495 [wrapper] Pilot exit status: 0
[2025-10-29 12:17:33] 2025-10-29 11:17:33,502 [wrapper] pandaids: 6864341001
[2025-10-29 12:17:33] 2025-10-29 11:17:33,517 [wrapper] cleanup supervisor_pilot 2155593 2139838
[2025-10-29 12:17:33] 2025-10-29 11:17:33,520 [wrapper] Test setup, not cleaning
[2025-10-29 12:17:33] 2025-10-29 11:17:33,522 [wrapper] apfmon messages muted
[2025-10-29 12:17:33] 2025-10-29 11:17:33,524 [wrapper] ==== wrapper stdout END ====
[2025-10-29 12:17:33] 2025-10-29 11:17:33,527 [wrapper] ==== wrapper stderr END ====
[2025-10-29 12:17:33]  *** Error codes and diagnostics ***
[2025-10-29 12:17:33]     "exeErrorCode": 0,
[2025-10-29 12:17:33]     "exeErrorDiag": "",
[2025-10-29 12:17:33]     "pilotErrorCode": 0,
[2025-10-29 12:17:33]     "pilotErrorDiag": "",
[2025-10-29 12:17:33]  *** Listing of results directory ***
[2025-10-29 12:17:33] total 393816
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc    557409 Oct 29 07:21 pilot3.tar.gz
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      5112 Oct 29 07:33 queuedata.json
[2025-10-29 12:17:33] -rwx------ 1 boinc boinc     36292 Oct 29 07:34 runpilot2-wrapper.sh
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc       100 Oct 29 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 12:17:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 11:03 run_atlas
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc       105 Oct 29 11:03 job.xml
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc 213569237 Oct 29 11:03 EVNT.47081487._000336.pool.root.1
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc    569676 Oct 29 11:03 input.tar.gz
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc     15120 Oct 29 11:03 start_atlas.sh
[2025-10-29 12:17:33] drwxrwx--x 2 boinc boinc      4096 Oct 29 11:03 shared
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc         0 Oct 29 11:03 boinc_setup_complete
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      6448 Oct 29 11:03 init_data.xml
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc         0 Oct 29 11:03 boinc_lockfile
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      2524 Oct 29 11:03 pandaJob.out
[2025-10-29 12:17:33] -rw------- 1 boinc boinc    979106 Oct 29 11:04 agis_schedconf.cvmfs.json
[2025-10-29 12:17:33] -rw------- 1 boinc boinc   1560632 Oct 29 11:04 agis_ddmendpoints.agis.ALL.json
[2025-10-29 12:17:33] drwx------ 5 boinc boinc      4096 Oct 29 11:04 pilot3
[2025-10-29 12:17:33] -rw------- 1 boinc boinc 184023519 Oct 29 12:16 HITS.47081490._008638.pool.root.1
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc       529 Oct 29 12:16 boinc_task_state.xml
[2025-10-29 12:17:33] -rw------- 1 boinc boinc      1016 Oct 29 12:16 memory_monitor_summary.json
[2025-10-29 12:17:33] -rw------- 1 boinc boinc    245301 Oct 29 12:16 log.47081490._008638.job.log.tgz.1
[2025-10-29 12:17:33] -rw------- 1 boinc boinc      7750 Oct 29 12:17 heartbeat.json
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc        27 Oct 29 12:17 wrapper_checkpoint.txt
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      8192 Oct 29 12:17 boinc_mmap_file
[2025-10-29 12:17:33] -rw------- 1 boinc boinc       747 Oct 29 12:17 pilotlog.txt
[2025-10-29 12:17:33] -rw------- 1 boinc boinc        95 Oct 29 12:17 pilot_heartbeat.json
[2025-10-29 12:17:33] -rw------- 1 boinc boinc    649835 Oct 29 12:17 log.47081490._008638.job.log.1
[2025-10-29 12:17:33] -rw------- 1 boinc boinc       357 Oct 29 12:17 output.list
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc       620 Oct 29 12:17 runtime_log
[2025-10-29 12:17:33] -rw------- 1 boinc boinc    911360 Oct 29 12:17 result.tar.gz
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      8797 Oct 29 12:17 runtime_log.err
[2025-10-29 12:17:33] -rw------- 1 boinc boinc       662 Oct 29 12:17 lldKDmhwEY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS3FODmcTk5Dm.diag
[2025-10-29 12:17:33] -rw-r--r-- 1 boinc boinc      8136 Oct 29 12:17 stderr.txt
[2025-10-29 12:17:33] HITS file was successfully produced:
[2025-10-29 12:17:33] -rw------- 1 boinc boinc 184023519 Oct 29 12:16 shared/HITS.pool.root.1
[2025-10-29 12:17:33]  *** Contents of shared directory: ***
[2025-10-29 12:17:33] total 389752
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc 213569237 Oct 29 11:03 ATLAS.root_0
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc    569676 Oct 29 11:03 input.tar.gz
[2025-10-29 12:17:33] -rw-r--r-- 2 boinc boinc     15120 Oct 29 11:03 start_atlas.sh
[2025-10-29 12:17:33] -rw------- 1 boinc boinc 184023519 Oct 29 12:16 HITS.pool.root.1
[2025-10-29 12:17:33] -rw------- 1 boinc boinc    911360 Oct 29 12:17 result.tar.gz
12:17:34 (2136112): run_atlas exited; CPU time 12509.721272
12:17:34 (2136112): called boinc_finish(0)

</stderr_txt>
]]>

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