Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:12:04 (1655453): wrapper (7.7.26015): starting
04:12:04 (1655453): wrapper: running run_atlas (--nthreads 9)
[2025-10-26 04:12:04] Arguments: --nthreads 9
[2025-10-26 04:12:04] Threads: 9
[2025-10-26 04:12:04] Checking for CVMFS
[2025-10-26 04:12:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-26 04:12:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-26 04:12:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-26 04:12:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-26 04:12:04] 2.13.2.0 5158 25583 110688 152146 0 423 24399383 40960000 19914 16776704 0 75400106 99.912 16344495 40677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-26 04:12:04] CVMFS is ok
[2025-10-26 04:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-26 04:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-26 04:12:04] Further information can be found at the LHC@home message board.
[2025-10-26 04:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-26 04:12:04] Checking for apptainer binary...
[2025-10-26 04:12:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-26 04:12:04] Running /usr/bin/apptainer --version
[2025-10-26 04:12:04] apptainer version 1.4.3-1.el9
[2025-10-26 04:12:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-26 04:12:05] c-212-13.aglt2.org
[2025-10-26 04:12:05] apptainer works
[2025-10-26 04:12:05] Set ATHENA_PROC_NUMBER=9
[2025-10-26 04:12:05] Set ATHENA_CORE_NUMBER=9
[2025-10-26 04:12:05] Starting ATLAS job with PandaID=6854955953
[2025-10-26 04:12:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 06:25:40]  *** The last 200 lines of the pilot log: ***
[2025-10-26 06:25:40] 2025-10-26 10:24:54,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 06:25:40] 2025-10-26 10:24:54,388 | INFO     | fitting pss+swap vs Time
[2025-10-26 06:25:40] 2025-10-26 10:24:54,388 | INFO     | sum of square deviations: 681212772.5
[2025-10-26 06:25:40] 2025-10-26 10:24:54,389 | INFO     | sum of deviations: 11227874293.000004
[2025-10-26 06:25:40] 2025-10-26 10:24:54,389 | INFO     | mean x: 1761470305.5
[2025-10-26 06:25:40] 2025-10-26 10:24:54,397 | INFO     | mean y: 2543185.5846153847
[2025-10-26 06:25:40] 2025-10-26 10:24:54,397 | INFO     | -- intersect: -29030334586.838997
[2025-10-26 06:25:40] 2025-10-26 10:24:54,398 | INFO     | intersect: -29030334586.838997
[2025-10-26 06:25:40] 2025-10-26 10:24:54,398 | INFO     | chi2: 2.966325809411723
[2025-10-26 06:25:40] 2025-10-26 10:24:54,398 | INFO     | sum of square deviations: 605592750.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,403 | INFO     | sum of deviations: 20648745097.999996
[2025-10-26 06:25:40] 2025-10-26 10:24:54,403 | INFO     | mean x: 1761470153.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,403 | INFO     | mean y: 2561599.72
[2025-10-26 06:25:40] 2025-10-26 10:24:54,403 | INFO     | -- intersect: -60057847292.28218
[2025-10-26 06:25:40] 2025-10-26 10:24:54,403 | INFO     | intersect: -60057847292.28218
[2025-10-26 06:25:40] 2025-10-26 10:24:54,407 | INFO     | chi2: 2.098712986862446
[2025-10-26 06:25:40] 2025-10-26 10:24:54,408 | INFO     | current chi2=2.098712986862446 (change=29.24873659516655 %)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,408 | INFO     | sum of square deviations: 535786790.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,408 | INFO     | sum of deviations: 20617943544.499996
[2025-10-26 06:25:40] 2025-10-26 10:24:54,408 | INFO     | mean x: 1761470000.5
[2025-10-26 06:25:40] 2025-10-26 10:24:54,408 | INFO     | mean y: 2561531.908333333
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | -- intersect: -67781657309.394905
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | intersect: -67781657309.394905
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | chi2: 2.0985507388018956
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | current chi2=2.0985507388018956 (change=0.007730836067912156 %)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | right removable region: 119
[2025-10-26 06:25:40] 2025-10-26 10:24:54,409 | INFO     | sum of square deviations: 605592750.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | sum of deviations: -16189931981.000004
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | mean x: 1761470458.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | mean y: 2597912.112
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | -- intersect: 47093793937.09897
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | intersect: 47093793937.09897
[2025-10-26 06:25:40] 2025-10-26 10:24:54,410 | INFO     | chi2: 1.0035672374497746
[2025-10-26 06:25:40] 2025-10-26 10:24:54,411 | INFO     | current chi2=1.0035672374497746 (change=66.16800372145228 %)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,411 | INFO     | sum of square deviations: 535786790.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,419 | INFO     | sum of deviations: -19855189113.5
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | mean x: 1761470610.5
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | mean y: 2605790.308333333
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | -- intersect: 65279191070.340706
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | intersect: 65279191070.340706
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | chi2: 0.9336876663510517
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | current chi2=0.9336876663510517 (change=6.96311801452368 %)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | left removable region: 20
[2025-10-26 06:25:40] 2025-10-26 10:24:54,420 | INFO     | sum of square deviations: 300842850.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | sum of deviations: -8411112306.999998
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | mean x: 1761470580.0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | mean y: 2631371.717171717
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | -- intersect: 49250691858.63393
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | intersect: 49250691858.63393
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | chi2: 0.017073190901783195
[2025-10-26 06:25:40] 2025-10-26 10:24:54,421 | INFO     | -- intersect: 49250691858.63393
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | current memory leak: -27.96 B/s (using 99 data points, chi2=0.02)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | could have reported an average CPU frequency of 2926 MHz (8 samples)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | ..............................
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | . Timing measurements:
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | . get job = 0 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | . initial setup = 3 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,422 | INFO     | . payload setup = 7 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,423 | INFO     | . stage-in = 0 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,423 | INFO     | . payload execution = 7901 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,423 | INFO     | . stage-out = 2 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,423 | INFO     | . log creation = 0 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,423 | INFO     | ..............................
[2025-10-26 06:25:40] 2025-10-26 10:24:54,559 | INFO     | time since job start (7955s) is within the limit (172800.0s)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,692 | INFO     | 
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | job summary report
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | --------------------------------------------------
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | PanDA job id: 6854955953
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | task id: 46771637
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | errors: (none)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | pilot state: finished 
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | transexitcode: 0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | exeerrorcode: 0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,694 | INFO     | exeerrordiag: 
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | exitcode: 0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | exitmsg: OK
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | cpuconsumptiontime: 39082 s
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | nevents: 400
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | neventsw: 0
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | pid: 1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | pgrp: 1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | corecount: 9
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | event service: False
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | sizes: {0: 2348935, 6: 2349197, 11: 2349225, 7913: 2376860, 7914: 2376859, 7917: 2385913, 7919: 2386097, 7939: 2386291}
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | --------------------------------------------------
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | 
[2025-10-26 06:25:40] 2025-10-26 10:24:54,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 06:25:40] 2025-10-26 10:24:54,851 | INFO     | job 6854955953 has completed (purged errors)
[2025-10-26 06:25:40] 2025-10-26 10:24:54,852 | INFO     | overall cleanup function is called
[2025-10-26 06:25:40] 2025-10-26 10:24:55,884 | INFO     | --- collectZombieJob: --- 10, [1665489]
[2025-10-26 06:25:40] 2025-10-26 10:24:55,885 | INFO     | zombie collector waiting for pid 1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:55,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 06:25:40] 2025-10-26 10:24:55,885 | INFO     | collected zombie processes
[2025-10-26 06:25:40] 2025-10-26 10:24:55,885 | INFO     | will attempt to kill all subprocesses of pid=1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:57,387 | INFO     | process IDs to be killed: [1665489] (in reverse order)
[2025-10-26 06:25:40] 2025-10-26 10:24:57,841 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 06:25:40] 2025-10-26 10:24:57,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 06:25:40] 2025-10-26 10:24:57,864 | INFO     | did not find any defunct processes belonging to 1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:57,886 | INFO     | did not find any defunct processes belonging to 1665489
[2025-10-26 06:25:40] 2025-10-26 10:24:57,886 | INFO     | ready for new job
[2025-10-26 06:25:40] 2025-10-26 10:24:57,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 06:25:40] 2025-10-26 10:24:57,889 | INFO     | ***************************************
[2025-10-26 06:25:40] 2025-10-26 10:24:57,890 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 06:25:40] 2025-10-26 10:24:57,890 | INFO     | ***************************************
[2025-10-26 06:25:40] 2025-10-26 10:24:57,890 | INFO     | 
[2025-10-26 06:25:40] 2025-10-26 10:24:57,940 | INFO     | architecture information:
[2025-10-26 06:25:40] 2025-10-26 10:24:57,957 | INFO     | executing command: cat /etc/os-release
[2025-10-26 06:25:40] 2025-10-26 10:24:58,079 | INFO     | cat /etc/os-release:
[2025-10-26 06:25:40] NAME="CentOS Linux"
[2025-10-26 06:25:40] VERSION="7 (Core)"
[2025-10-26 06:25:40] ID="centos"
[2025-10-26 06:25:40] ID_LIKE="rhel fedora"
[2025-10-26 06:25:40] VERSION_ID="7"
[2025-10-26 06:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 06:25:40] ANSI_COLOR="0;31"
[2025-10-26 06:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 06:25:40] HOME_URL="https://www.centos.org/"
[2025-10-26 06:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 06:25:40] 
[2025-10-26 06:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 06:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 06:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 06:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 06:25:40] 
[2025-10-26 06:25:40] 2025-10-26 10:24:58,080 | INFO     | ***************************************
[2025-10-26 06:25:40] 2025-10-26 10:24:58,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-26 06:25:40] 2025-10-26 10:24:58,680 | INFO     | sufficient remaining disk space (128810221568 B)
[2025-10-26 06:25:40] 2025-10-26 10:24:58,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 06:25:40] 2025-10-26 10:24:58,681 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 06:25:40] 2025-10-26 10:24:58,681 | INFO     | update_server=False
[2025-10-26 06:25:40] 2025-10-26 10:24:58,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 06:25:40] 2025-10-26 10:24:58,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 06:25:40] 2025-10-26 10:24:59,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 06:25:40] 2025-10-26 10:24:59,141 | INFO     | aborting loop
[2025-10-26 06:25:40] 2025-10-26 10:24:59,438 | INFO     | all data control threads have been joined
[2025-10-26 06:25:40] 2025-10-26 10:24:59,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 06:25:40] 2025-10-26 10:24:59,687 | INFO     | [job] retrieve thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:24:59,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 06:25:40] 2025-10-26 10:24:59,778 | INFO     | [job] validate thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:24:59,810 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:24:59,811 | INFO     | [data] copytool_in thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,048 | INFO     | all payload control threads have been joined
[2025-10-26 06:25:40] 2025-10-26 10:25:00,146 | INFO     | [job] job monitor thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,210 | INFO     | [payload] validate_post thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,356 | INFO     | all job control threads have been joined
[2025-10-26 06:25:40] 2025-10-26 10:25:00,456 | INFO     | [data] control thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,688 | INFO     | [data] copytool_out thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,712 | INFO     | [job] queue monitor thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,781 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,782 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:00,783 | INFO     | [payload] failed_post thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:01,054 | INFO     | [payload] control thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:01,362 | INFO     | [job] control thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:03,562 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:09,623 | INFO     | job.realtimelogging is not enabled
[2025-10-26 06:25:40] 2025-10-26 10:25:10,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 06:25:40] 2025-10-26 10:25:28,814 | INFO     | PID=1659121 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 06:25:40] 2025-10-26 10:25:28,819 | INFO     | .. there are 15 such processes running
[2025-10-26 06:25:40] 2025-10-26 10:25:28,820 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 06:25:40] 2025-10-26 10:25:28,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 06:25:40] 2025-10-26 10:25:28,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 06:25:40] 2025-10-26 10:25:32,419 | INFO     | [monitor] cgroup control has ended
[2025-10-26 06:25:40] 2025-10-26 10:25:32,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598118524736)>', '<ExcThread(monitor, started 140597457299200)>']
[2025-10-26 06:25:40] 2025-10-26 10:25:33,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 06:25:40] 2025-10-26 10:25:33,851 | INFO     | [monitor] control thread has ended
[2025-10-26 06:25:40] 2025-10-26 10:25:37,987 | INFO     | all workflow threads have been joined
[2025-10-26 06:25:40] 2025-10-26 10:25:37,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 06:25:40] 2025-10-26 10:25:37,988 | INFO     | traces error code: 0
[2025-10-26 06:25:40] 2025-10-26 10:25:37,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 06:25:40] 2025-10-26 10:25:39,017 [wrapper] ==== pilot stdout END ====
[2025-10-26 06:25:40] 2025-10-26 10:25:39,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 06:25:40] 2025-10-26 10:25:39,058 [wrapper] pilotpid: 1659121
[2025-10-26 06:25:40] 2025-10-26 10:25:39,116 [wrapper] Pilot exit status: 0
[2025-10-26 06:25:40] 2025-10-26 10:25:39,287 [wrapper] pandaids: 6854955953
[2025-10-26 06:25:40] 2025-10-26 10:25:39,525 [wrapper] cleanup supervisor_pilot 1922493 1659122
[2025-10-26 06:25:40] 2025-10-26 10:25:39,619 [wrapper] Test setup, not cleaning
[2025-10-26 06:25:40] 2025-10-26 10:25:39,645 [wrapper] apfmon messages muted
[2025-10-26 06:25:40] 2025-10-26 10:25:39,717 [wrapper] ==== wrapper stdout END ====
[2025-10-26 06:25:40] 2025-10-26 10:25:39,731 [wrapper] ==== wrapper stderr END ====
[2025-10-26 06:25:40]  *** Error codes and diagnostics ***
[2025-10-26 06:25:40]     "exeErrorCode": 0,
[2025-10-26 06:25:40]     "exeErrorDiag": "",
[2025-10-26 06:25:40]     "pilotErrorCode": 0,
[2025-10-26 06:25:40]     "pilotErrorDiag": "",
[2025-10-26 06:25:40]  *** Listing of results directory ***
[2025-10-26 06:25:40] total 429220
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 13:32 pilot3.tar.gz
[2025-10-26 06:25:40] -rwx------. 1 boincer umatlas     36292 Oct 23 14:07 runpilot2-wrapper.sh
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 14:07 queuedata.json
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas       100 Oct 26 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 06:25:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 26 04:12 run_atlas
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas       105 Oct 26 04:12 job.xml
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas 229455091 Oct 26 04:12 EVNT.46771634._004367.pool.root.1
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 26 04:12 start_atlas.sh
[2025-10-26 06:25:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 26 04:12 shared
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 26 04:12 input.tar.gz
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas         0 Oct 26 04:12 boinc_lockfile
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas      2562 Oct 26 04:12 pandaJob.out
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas    978597 Oct 26 04:12 agis_schedconf.cvmfs.json
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas   1560772 Oct 26 04:12 agis_ddmendpoints.agis.ALL.json
[2025-10-26 06:25:40] drwx------. 5 boincer umatlas      4096 Oct 26 04:12 pilot3
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas      6946 Oct 26 06:18 init_data.xml
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas 203126163 Oct 26 06:23 HITS.46771637._109455.pool.root.1
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas       529 Oct 26 06:23 boinc_task_state.xml
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas      1040 Oct 26 06:24 memory_monitor_summary.json
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas    398462 Oct 26 06:24 log.46771637._109455.job.log.tgz.1
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas      7789 Oct 26 06:24 heartbeat.json
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas        95 Oct 26 06:25 pilot_heartbeat.json
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 26 06:25 boinc_mmap_file
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas        27 Oct 26 06:25 wrapper_checkpoint.txt
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas      4897 Oct 26 06:25 pilotlog.txt
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas   1118625 Oct 26 06:25 log.46771637._109455.job.log.1
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas       357 Oct 26 06:25 output.list
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas       620 Oct 26 06:25 runtime_log
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas   1536000 Oct 26 06:25 result.tar.gz
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas      8703 Oct 26 06:25 runtime_log.err
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas       654 Oct 26 06:25 nYoLDmgtEW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrM9NDmENIE4m.diag
[2025-10-26 06:25:40] -rw-r--r--. 1 boincer umatlas     20905 Oct 26 06:25 stderr.txt
[2025-10-26 06:25:40] HITS file was successfully produced:
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas 203126163 Oct 26 06:23 shared/HITS.pool.root.1
[2025-10-26 06:25:40]  *** Contents of shared directory: ***
[2025-10-26 06:25:40] total 424528
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas 229455091 Oct 26 04:12 ATLAS.root_0
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 26 04:12 start_atlas.sh
[2025-10-26 06:25:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 26 04:12 input.tar.gz
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas 203126163 Oct 26 06:23 HITS.pool.root.1
[2025-10-26 06:25:40] -rw-------. 1 boincer umatlas   1536000 Oct 26 06:25 result.tar.gz
06:25:42 (1655453): run_atlas exited; CPU time 39271.404020
06:25:42 (1655453): called boinc_finish(0)

</stderr_txt>
]]>

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