Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-25 09:37:13 (11180): vboxwrapper version 26210
2025-10-25 09:37:13 (11180): BOINC client version: 8.2.4
2025-10-25 09:37:13 (11180): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-25 09:37:14 (11180): Successfully copied 'init_data.xml' to the shared directory.
2025-10-25 09:37:14 (11180): Create VM. (boinc_edfe83824debb7ec, slot#21)
2025-10-25 09:37:15 (11180): Setting Memory Size for VM. (4800MB)
2025-10-25 09:37:15 (11180): Setting CPU Count for VM. (8)
2025-10-25 09:37:15 (11180): Setting Chipset Options for VM.
2025-10-25 09:37:15 (11180): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-25 09:37:16 (11180): Setting Boot Options for VM.
2025-10-25 09:37:16 (11180): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-25 09:37:17 (11180): Enabling VM Network Access.
2025-10-25 09:37:17 (11180): Disabling USB Support for VM.
2025-10-25 09:37:17 (11180): Disabling COM Port Support for VM.
2025-10-25 09:37:17 (11180): Disabling LPT Port Support for VM.
2025-10-25 09:37:18 (11180): Disabling Audio Support for VM.
2025-10-25 09:37:18 (11180): Disabling Clipboard Support for VM.
2025-10-25 09:37:18 (11180): Disabling Drag and Drop Support for VM.
2025-10-25 09:37:18 (11180): Adding storage controller(s) to VM.
2025-10-25 09:37:19 (11180): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-25 09:37:19 (11180): Adding VirtualBox Guest Additions to VM.
2025-10-25 09:37:19 (11180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-25 09:37:20 (11180): forwarding host port 58748 to guest port 80
2025-10-25 09:37:20 (11180): Enabling remote desktop for VM.
2025-10-25 09:37:20 (11180): Required extension pack not installed, remote desktop not enabled.
2025-10-25 09:37:20 (11180): Enabling shared directory for VM.
2025-10-25 09:37:21 (11180): Starting VM using VBoxManage interface. (boinc_edfe83824debb7ec, slot#21)
2025-10-25 09:37:29 (11180): Successfully started VM. (PID = '8936')
2025-10-25 09:37:29 (11180): Reporting VM Process ID to BOINC.
2025-10-25 09:37:29 (11180): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-25 09:37:29 (11180): Guest Log: CPUID EDX: 0x178bfbff
2025-10-25 09:37:29 (11180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-25 09:37:29 (11180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-25 09:37:29 (11180): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-25 09:37:29 (11180): Detected: Web Application Enabled (http://localhost:58748)
2025-10-25 09:37:29 (11180): Preference change detected
2025-10-25 09:37:29 (11180): Setting CPU throttle for VM. (100%)
2025-10-25 09:37:29 (11180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-25 09:37:31 (11180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-25 09:37:31 (11180): Guest Log: BIOS: Booting from Hard Disk...
2025-10-25 09:37:34 (11180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-25 09:37:34 (11180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-25 09:37:34 (11180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-25 09:37:42 (11180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-25 09:37:42 (11180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-25 09:37:57 (11180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000224 main     Log opened 2025-10-25T09:37:55.406353000Z
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000442 main     OS Product: Linux
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000502 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000553 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000605 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000607 main     Process ID: 1372
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.000608 main     Package type: LINUX_64BITS_GENERIC
2025-10-25 09:37:57 (11180): Guest Log: 00:00:00.001814 main     5.2.32 r132073 started. Verbose level = 0
2025-10-25 09:37:57 (11180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-25 09:37:57 (11180): Guest Log: [INFO] Mounting shared directory
2025-10-25 09:37:57 (11180): Guest Log: [INFO] Checking for init_data.xml
2025-10-25 09:38:00 (11180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-25 09:38:00 (11180): Guest Log: [INFO] Detected branch: prod
2025-10-25 09:38:01 (11180): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-25 09:38:01 (11180): Guest Log: Copying input files
2025-10-25 09:38:02 (11180): Guest Log: Copied input files into RunAtlas.
2025-10-25 09:38:02 (11180): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-25 09:38:02 (11180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-25 09:38:02 (11180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-25 09:38:02 (11180): Guest Log: Further information can be found at the LHC@home message board.
2025-10-25 09:38:07 (11180): Guest Log: 00:00:10.018874 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 156 831 000ns (GuestNow=1 761 399 486 566 872 000 ns GuestLast=1 761 385 075 410 041 000 ns fSetTimeLastLoop=true )
2025-10-25 09:39:02 (11180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-25 09:39:02 (11180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-25 09:39:02 (11180): Guest Log: 2.6.3.0 1650 1 30192 152119 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-25 09:39:05 (11180): Guest Log: copied the webapp to /var/www
2025-10-25 09:39:05 (11180): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-25 09:39:05 (11180): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-25 09:39:05 (11180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-25 09:39:05 (11180): Guest Log:  *** Starting ATLAS job. (PandaID=6856223737 taskID=46771637) ***
2025-10-25 11:17:35 (11180): Status Report: Elapsed Time: '6000.000000'
2025-10-25 11:17:35 (11180): Status Report: CPU Time: '43713.375000'
2025-10-25 12:20:02 (11180): Guest Log:  *** Job finished ***
2025-10-25 12:20:02 (11180): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:39,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:39,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:53,746 | INFO     | [monitor] cgroup control has ended
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:54,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636140472128)>', '<ExcThread(monitor, started 139635317516032)>']
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:55,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:55,091 | INFO     | [monitor] control thread has ended
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,694 | INFO     | all workflow threads have been joined
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,694 | INFO     | end of generic workflow (traces error code: 0)
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,694 | INFO     | traces error code: 0
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,894 [wrapper] ==== pilot stdout END ====
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,904 [wrapper] ==== wrapper stdout RESUME ====
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,914 [wrapper] pilotpid: 6097
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,923 [wrapper] Pilot exit status: 0
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:19:59,983 [wrapper] pandaids: 6856223737
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:20:00,049 [wrapper] cleanup supervisor_pilot  8163 6098
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:20:00,060 [wrapper] Test setup, not cleaning
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:20:00,070 [wrapper] apfmon messages muted
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:20:00,079 [wrapper] ==== wrapper stdout END ====
2025-10-25 12:20:02 (11180): Guest Log: 2025-10-25 16:20:00,087 [wrapper] ==== wrapper stderr END ====
2025-10-25 12:20:02 (11180): Guest Log:  *** Error codes and diagnostics ***
2025-10-25 12:20:02 (11180): Guest Log:     "exeErrorCode": 0,
2025-10-25 12:20:02 (11180): Guest Log:     "exeErrorDiag": "",
2025-10-25 12:20:02 (11180): Guest Log:     "pilotErrorCode": 0,
2025-10-25 12:20:02 (11180): Guest Log:     "pilotErrorDiag": "",
2025-10-25 12:20:02 (11180): Guest Log:  *** Listing of results directory ***
2025-10-25 12:20:02 (11180): Guest Log: total 207292
2025-10-25 12:20:02 (11180): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 24 23:40 pilot3.tar.gz
2025-10-25 12:20:02 (11180): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 25 00:33 runpilot2-wrapper.sh
2025-10-25 12:20:02 (11180): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 25 00:33 queuedata.json
2025-10-25 12:20:02 (11180): Guest Log: -rwxr-xr-x. 1 atlas atlas      5852 Oct 25 13:38 init_data.xml
2025-10-25 12:20:02 (11180): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 25 13:38 input.tar.gz
2025-10-25 12:20:02 (11180): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 25 13:38 start_atlas.sh
2025-10-25 12:20:02 (11180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 25 13:38 EVNT.46771634._005085.pool.root.1 -> /data/./ATLAS.root_0
2025-10-25 12:20:02 (11180): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Oct 25 13:39 pandaJob.out
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas    978288 Oct 25 13:39 agis_schedconf.cvmfs.json
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas   1560772 Oct 25 13:39 agis_ddmendpoints.agis.ALL.json
2025-10-25 12:20:02 (11180): Guest Log: drwx------. 5 atlas atlas      4096 Oct 25 13:39 pilot3
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas 205156609 Oct 25 16:18 HITS.46771637._128124.pool.root.1
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 25 16:18 memory_monitor_summary.json
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas        95 Oct 25 16:18 pilot_heartbeat.json
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas    382258 Oct 25 16:18 log.46771637._128124.job.log.tgz.1
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas      7830 Oct 25 16:19 heartbeat.json
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 25 16:19 pilotlog.txt
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas   1257189 Oct 25 16:20 log.46771637._128124.job.log.1
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas       357 Oct 25 16:20 output.list
2025-10-25 12:20:02 (11180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 25 16:20 runtime_log
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas   1658880 Oct 25 16:20 result.tar.gz
2025-10-25 12:20:02 (11180): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct 25 16:20 runtime_log.err
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas       653 Oct 25 16:20 iPoKDm7OhW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcYDODmguo9Rn.diag
2025-10-25 12:20:02 (11180): Guest Log: Looking for outputfile HITS.46771637._128124.pool.root.1
2025-10-25 12:20:02 (11180): Guest Log: HITS file was successfully produced
2025-10-25 12:20:02 (11180): Guest Log: -rw-------. 1 atlas atlas 205156609 Oct 25 16:18 /home/atlas/RunAtlas/HITS.46771637._128124.pool.root.1
2025-10-25 12:20:05 (11180): Guest Log: Successfully finished the ATLAS job!
2025-10-25 12:20:05 (11180): Guest Log: Copying the results back to the shared directory!
2025-10-25 12:20:05 (11180): Guest Log:  *** Contents of shared directory: ***
2025-10-25 12:20:06 (11180): Guest Log: total 424548
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root 227316762 Oct 25 13:37 ATLAS.root_0
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root 205156609 Oct 25 16:20 HITS.pool.root.1
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root      5852 Oct 25 13:37 init_data.xml
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 25 10:36 input.tar.gz
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root   1658880 Oct 25 16:20 result.tar.gz
2025-10-25 12:20:06 (11180): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 25 10:36 start_atlas.sh
2025-10-25 12:20:06 (11180): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-25 12:20:06 (11180): VM Completion File Detected.
2025-10-25 12:20:06 (11180): Powering off VM.
2025-10-25 12:20:07 (11180): Successfully stopped VM.
2025-10-25 12:20:07 (11180): Deregistering VM. (boinc_edfe83824debb7ec, slot#21)
2025-10-25 12:20:07 (11180): Removing network bandwidth throttle group from VM.
2025-10-25 12:20:07 (11180): Removing VM from VirtualBox.
2025-10-25 12:20:13 (11180): called boinc_finish(0)

</stderr_txt>
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