Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:13 (749633): wrapper (7.7.26015): starting
17:53:13 (749633): wrapper: running run_atlas (--nthreads 8)
[2025-07-19 17:53:13] Arguments: --nthreads 8
[2025-07-19 17:53:13] Threads: 8
[2025-07-19 17:53:13] Checking for CVMFS
[2025-07-19 17:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-19 17:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-19 17:53:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-19 17:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-19 17:53:14] 2.13.0.0 104956 16279 332464 148519 1 547 40514969 40960000 40879 16776704 0 239156698 99.731 175242186 30486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-19 17:53:14] CVMFS is ok
[2025-07-19 17:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-19 17:53:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-19 17:53:14] Further information can be found at the LHC@home message board.
[2025-07-19 17:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-19 17:53:14] Checking for apptainer binary...
[2025-07-19 17:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-19 17:53:14] Running /usr/bin/apptainer --version
[2025-07-19 17:53:14] apptainer version 1.4.1-1.el9
[2025-07-19 17:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-19 17:53:14] c8-7-4.aglt2.org
[2025-07-19 17:53:14] apptainer works
[2025-07-19 17:53:14] Set ATHENA_PROC_NUMBER=8
[2025-07-19 17:53:14] Set ATHENA_CORE_NUMBER=8
[2025-07-19 17:53:14] Starting ATLAS job with PandaID=6739113014
[2025-07-19 17:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-19 19:35:20]  *** The last 200 lines of the pilot log: ***
[2025-07-19 19:35:20] ]
[2025-07-19 19:35:20] 2025-07-19 23:34:28,438 | INFO     | transferring file log.45668889._000072.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6739113014/log.45668889._000072.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-19 19:35:20] 2025-07-19 23:34:28,438 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6739113014/log.45668889._000072.job.log.tgz.1 /tmp/boinchome/slots/3/log.45668889._000072.job
[2025-07-19 19:35:20] 2025-07-19 23:34:28,493 | INFO     | adding to output.list: log.45668889._000072.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/23/log.45668889._000072.job.log.tg
[2025-07-19 19:35:20] 2025-07-19 23:34:28,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-19 19:35:20] 2025-07-19 23:34:28,493 | INFO     | summary of transferred files:
[2025-07-19 19:35:20] 2025-07-19 23:34:28,493 | INFO     |  -- lfn=log.45668889._000072.job.log.tgz.1, status_code=0, status=transferred
[2025-07-19 19:35:20] 2025-07-19 23:34:28,494 | INFO     | stage-out finished correctly
[2025-07-19 19:35:20] 2025-07-19 23:34:30,616 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-19 19:35:20] 2025-07-19 23:34:31,423 | WARNING  | process 800026 can no longer be monitored (due to stat problems) - aborting
[2025-07-19 19:35:20] 2025-07-19 23:34:31,423 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6739113014/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 19:35:20] 2025-07-19 23:34:32,021 | INFO     | number of running child processes to parent process 800026: 1
[2025-07-19 19:35:20] 2025-07-19 23:34:32,021 | INFO     | maximum number of monitored processes: 6
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | job 6739113014 has state=finished
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | preparing for final server update for job 6739113014 in state='finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | this job has now completed (state=finished)
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | log transfer has been attempted: DONE
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | job 6739113014 has finished - writing final server update
[2025-07-19 19:35:20] 2025-07-19 23:34:33,235 | INFO     | total number of processed events: 400 (read)
[2025-07-19 19:35:20] 2025-07-19 23:34:33,236 | INFO     | executing command: lscpu
[2025-07-19 19:35:20] 2025-07-19 23:34:33,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-19 19:35:20] 2025-07-19 23:34:34,528 | INFO     | monitor loop #376: job 0:6739113014 is in state 'finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:34,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:20] 2025-07-19 23:34:35,058 | INFO     | PID=761224 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-19 19:35:20] 2025-07-19 23:34:35,058 | INFO     | .. there are 108 such processes running
[2025-07-19 19:35:20] 2025-07-19 23:34:37,033 | INFO     | monitor loop #377: job 0:6739113014 is in state 'finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:37,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:20] 2025-07-19 23:34:39,537 | INFO     | monitor loop #378: job 0:6739113014 is in state 'finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:39,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:20] 2025-07-19 23:34:42,041 | INFO     | monitor loop #379: job 0:6739113014 is in state 'finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:42,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:20] 2025-07-19 23:34:44,546 | INFO     | monitor loop #380: job 0:6739113014 is in state 'finished'
[2025-07-19 19:35:20] 2025-07-19 23:34:44,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,373 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-19 19:35:20] 2025-07-19 23:34:46,378 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.992203125005
[2025-07-19 19:35:20] 2025-07-19 23:34:46,391 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6739113014/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,392 | INFO     | extracted standard info from prmon json
[2025-07-19 19:35:20] 2025-07-19 23:34:46,392 | INFO     | extracted standard memory fields from prmon json
[2025-07-19 19:35:20] 2025-07-19 23:34:46,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-19 19:35:20] 2025-07-19 23:34:46,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-19 19:35:20] 2025-07-19 23:34:46,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-19 19:35:20] 2025-07-19 23:34:46,393 | INFO     | fitting pss+swap vs Time
[2025-07-19 19:35:20] 2025-07-19 23:34:46,393 | INFO     | sum of square deviations: 233641590.0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,393 | INFO     | sum of deviations: 441827087.0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | mean x: 1752965159.0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | mean y: 2179382.054945055
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | -- intersect: -3312759066.2472677
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | intersect: -3312759066.2472677
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | chi2: 0.033219892238369964
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | -- intersect: -3312759066.2472677
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | current memory leak: 1.89 B/s (using 91 data points, chi2=0.03)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | could have reported an average CPU frequency of 3798 MHz (7 samples)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | ..............................
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . Timing measurements:
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . get job = 0 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . initial setup = 3 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . payload setup = 23 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . stage-in = 0 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . payload execution = 5977 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . stage-out = 0 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | . log creation = 0 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,394 | INFO     | ..............................
[2025-07-19 19:35:20] 2025-07-19 23:34:46,450 | INFO     | 
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | job summary report
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | --------------------------------------------------
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | PanDA job id: 6739113014
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | task id: 45668889
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | errors: (none)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | pilot state: finished 
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | transexitcode: 0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | exeerrorcode: 0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | exeerrordiag: 
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | exitcode: 0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | exitmsg: OK
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | cpuconsumptiontime: 30969 s
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | nevents: 400
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | neventsw: 0
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | pid: 800026
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | pgrp: 800026
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | corecount: 8
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | event service: False
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | sizes: {0: 2397195, 1: 2397450, 12: 2397450, 17: 2397740, 23: 2397768, 6005: 2424605, 6006: 2433603, 6008: 2433659, 6024: 2433853}
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | --------------------------------------------------
[2025-07-19 19:35:20] 2025-07-19 23:34:46,451 | INFO     | 
[2025-07-19 19:35:20] 2025-07-19 23:34:46,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | job 6739113014 has completed (purged errors)
[2025-07-19 19:35:20] 2025-07-19 23:34:46,469 | INFO     | overall cleanup function is called
[2025-07-19 19:35:20] 2025-07-19 23:34:47,477 | INFO     | --- collectZombieJob: --- 10, [800026]
[2025-07-19 19:35:20] 2025-07-19 23:34:47,478 | INFO     | zombie collector waiting for pid 800026
[2025-07-19 19:35:20] 2025-07-19 23:34:47,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-19 19:35:20] 2025-07-19 23:34:47,478 | INFO     | collected zombie processes
[2025-07-19 19:35:20] 2025-07-19 23:34:47,478 | INFO     | will attempt to kill all subprocesses of pid=800026
[2025-07-19 19:35:20] 2025-07-19 23:34:48,143 | INFO     | process IDs to be killed: [800026] (in reverse order)
[2025-07-19 19:35:20] 2025-07-19 23:34:48,404 | WARNING  | found no corresponding commands to process id(s)
[2025-07-19 19:35:20] 2025-07-19 23:34:48,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-19 19:35:20] 2025-07-19 23:34:48,438 | INFO     | did not find any defunct processes belonging to 800026
[2025-07-19 19:35:20] 2025-07-19 23:34:48,469 | INFO     | did not find any defunct processes belonging to 800026
[2025-07-19 19:35:20] 2025-07-19 23:34:48,469 | INFO     | ready for new job
[2025-07-19 19:35:20] 2025-07-19 23:34:48,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-19 19:35:20] 2025-07-19 23:34:48,471 | INFO     | ***************************************
[2025-07-19 19:35:20] 2025-07-19 23:34:48,471 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-19 19:35:20] 2025-07-19 23:34:48,471 | INFO     | ***************************************
[2025-07-19 19:35:20] 2025-07-19 23:34:48,471 | INFO     | 
[2025-07-19 19:35:20] 2025-07-19 23:34:48,494 | INFO     | architecture information:
[2025-07-19 19:35:20] 2025-07-19 23:34:48,501 | INFO     | executing command: cat /etc/os-release
[2025-07-19 19:35:20] 2025-07-19 23:34:48,543 | INFO     | cat /etc/os-release:
[2025-07-19 19:35:20] NAME="CentOS Linux"
[2025-07-19 19:35:20] VERSION="7 (Core)"
[2025-07-19 19:35:20] ID="centos"
[2025-07-19 19:35:20] ID_LIKE="rhel fedora"
[2025-07-19 19:35:20] VERSION_ID="7"
[2025-07-19 19:35:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-19 19:35:20] ANSI_COLOR="0;31"
[2025-07-19 19:35:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-19 19:35:20] HOME_URL="https://www.centos.org/"
[2025-07-19 19:35:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-19 19:35:20] 
[2025-07-19 19:35:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-19 19:35:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-19 19:35:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-19 19:35:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-19 19:35:20] 
[2025-07-19 19:35:20] 2025-07-19 23:34:48,543 | INFO     | ***************************************
[2025-07-19 19:35:20] 2025-07-19 23:34:49,049 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-19 19:35:20] 2025-07-19 23:34:49,079 | INFO     | sufficient remaining disk space (170975559680 B)
[2025-07-19 19:35:20] 2025-07-19 23:34:49,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-19 19:35:20] 2025-07-19 23:34:49,079 | INFO     | current server update state: UPDATING_FINAL
[2025-07-19 19:35:20] 2025-07-19 23:34:49,079 | INFO     | update_server=False
[2025-07-19 19:35:20] 2025-07-19 23:34:49,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-19 19:35:20] 2025-07-19 23:34:49,084 | INFO     | all payload control threads have been joined
[2025-07-19 19:35:20] 2025-07-19 23:34:49,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-19 19:35:20] 2025-07-19 23:34:49,564 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-19 19:35:20] 2025-07-19 23:34:49,565 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-19 19:35:20] 2025-07-19 23:34:49,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:35:20] 2025-07-19 23:34:49,565 | INFO     | will abort loop
[2025-07-19 19:35:20] 2025-07-19 23:34:50,003 | INFO     | all data control threads have been joined
[2025-07-19 19:35:20] 2025-07-19 23:34:50,091 | INFO     | [payload] control thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,098 | INFO     | [job] retrieve thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-19 19:35:20] 2025-07-19 23:34:50,286 | INFO     | [data] copytool_in thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,430 | INFO     | [job] create_data_payload thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,502 | INFO     | [job] validate thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,546 | INFO     | all job control threads have been joined
[2025-07-19 19:35:20] 2025-07-19 23:34:50,570 | INFO     | [job] job monitor thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,879 | INFO     | [payload] failed_post thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:50,955 | INFO     | [payload] validate_pre thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:51,010 | INFO     | [data] control thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:51,127 | INFO     | [data] copytool_out thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:51,178 | INFO     | [payload] validate_post thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:51,202 | INFO     | [payload] execute_payloads thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:51,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:35:20] 2025-07-19 23:34:51,553 | INFO     | [job] control thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:52,469 | INFO     | [job] queue monitor thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:54,246 | INFO     | [data] queue_monitor thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:34:59,670 | INFO     | job.realtimelogging is not enabled
[2025-07-19 19:35:20] 2025-07-19 23:35:00,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-19 19:35:20] 2025-07-19 23:35:01,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710116267840)>', '<ExcThread(monitor, started 139709640599296)>']
[2025-07-19 19:35:20] 2025-07-19 23:35:06,154 | INFO     | all workflow threads have been joined
[2025-07-19 19:35:20] 2025-07-19 23:35:06,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-19 19:35:20] 2025-07-19 23:35:06,154 | INFO     | traces error code: 0
[2025-07-19 19:35:20] 2025-07-19 23:35:06,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-19 19:35:20] 2025-07-19 23:35:20,167 | INFO     | PID=761224 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-19 19:35:20] 2025-07-19 23:35:20,168 | INFO     | .. there are 107 such processes running
[2025-07-19 19:35:20] 2025-07-19 23:35:20,168 | INFO     | found 0 job(s) in 20 queues
[2025-07-19 19:35:20] 2025-07-19 23:35:20,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-19 19:35:20] 2025-07-19 23:35:20,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-19 19:35:20] 2025-07-19 23:35:20,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-19 19:35:20] 2025-07-19 23:35:20,169 | INFO     | [monitor] control thread has ended
[2025-07-19 19:35:20] 2025-07-19 23:35:20,298 [wrapper] ==== pilot stdout END ====
[2025-07-19 19:35:20] 2025-07-19 23:35:20,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-19 19:35:20] 2025-07-19 23:35:20,314 [wrapper] pilotpid: 761224
[2025-07-19 19:35:20] 2025-07-19 23:35:20,325 [wrapper] Pilot exit status: 0
[2025-07-19 19:35:20] 2025-07-19 23:35:20,340 [wrapper] pandaids: 6739113014
[2025-07-19 19:35:20] 2025-07-19 23:35:20,564 [wrapper] cleanup supervisor_pilot 1127879 761225
[2025-07-19 19:35:20] 2025-07-19 23:35:20,568 [wrapper] Test setup, not cleaning
[2025-07-19 19:35:20] 2025-07-19 23:35:20,572 [wrapper] apfmon messages muted
[2025-07-19 19:35:20] 2025-07-19 23:35:20,575 [wrapper] ==== wrapper stdout END ====
[2025-07-19 19:35:20] 2025-07-19 23:35:20,577 [wrapper] ==== wrapper stderr END ====
[2025-07-19 19:35:20]  *** Error codes and diagnostics ***
[2025-07-19 19:35:20]     "exeErrorCode": 0,
[2025-07-19 19:35:20]     "exeErrorDiag": "",
[2025-07-19 19:35:20]     "pilotErrorCode": 0,
[2025-07-19 19:35:20]     "pilotErrorDiag": "",
[2025-07-19 19:35:20]  *** Listing of results directory ***
[2025-07-19 19:35:20] total 526632
[2025-07-19 19:35:20] -rwx------. 1 boincer umatlas     36292 Jul 19 17:50 runpilot2-wrapper.sh
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 19 17:50 queuedata.json
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 19 17:50 pilot3.tar.gz
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas       100 Jul 19 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-19 19:35:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 19 17:53 run_atlas
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas       105 Jul 19 17:53 job.xml
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas 307713275 Jul 19 17:53 EVNT.45668886._000003.pool.root.1
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:53 start_atlas.sh
[2025-07-19 19:35:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 19 17:53 shared
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas    542866 Jul 19 17:53 input.tar.gz
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas         0 Jul 19 17:53 boinc_lockfile
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas      2532 Jul 19 17:53 pandaJob.out
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas    978446 Jul 19 17:53 agis_schedconf.cvmfs.json
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas   1593055 Jul 19 17:53 agis_ddmendpoints.agis.ALL.json
[2025-07-19 19:35:20] drwx------. 4 boincer umatlas      4096 Jul 19 17:53 pilot3
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas      7159 Jul 19 19:29 init_data.xml
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas       530 Jul 19 19:33 boinc_task_state.xml
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas 225983200 Jul 19 19:34 HITS.45668889._000072.pool.root.1
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas      1030 Jul 19 19:34 memory_monitor_summary.json
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas    326403 Jul 19 19:34 log.45668889._000072.job.log.tgz.1
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas      7768 Jul 19 19:34 heartbeat.json
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 19 19:35 boinc_mmap_file
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas        95 Jul 19 19:35 pilot_heartbeat.json
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas       823 Jul 19 19:35 pilotlog.txt
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas        27 Jul 19 19:35 wrapper_checkpoint.txt
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas    521746 Jul 19 19:35 log.45668889._000072.job.log.1
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas       357 Jul 19 19:35 output.list
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas       620 Jul 19 19:35 runtime_log
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas    870400 Jul 19 19:35 result.tar.gz
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas       650 Jul 19 19:35 zRwLDmncUx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAbsKDmuJ4rCo.diag
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas      8650 Jul 19 19:35 runtime_log.err
[2025-07-19 19:35:20] -rw-r--r--. 1 boincer umatlas     22501 Jul 19 19:35 stderr.txt
[2025-07-19 19:35:20] HITS file was successfully produced:
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas 225983200 Jul 19 19:34 shared/HITS.pool.root.1
[2025-07-19 19:35:20]  *** Contents of shared directory: ***
[2025-07-19 19:35:20] total 522600
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas 307713275 Jul 19 17:53 ATLAS.root_0
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:53 start_atlas.sh
[2025-07-19 19:35:20] -rw-r--r--. 2 boincer umatlas    542866 Jul 19 17:53 input.tar.gz
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas 225983200 Jul 19 19:34 HITS.pool.root.1
[2025-07-19 19:35:20] -rw-------. 1 boincer umatlas    870400 Jul 19 19:35 result.tar.gz
19:35:22 (749633): run_atlas exited; CPU time 31216.052761
19:35:22 (749633): called boinc_finish(0)

</stderr_txt>
]]>

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