Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:52:44 (742246): wrapper (7.7.26015): starting
17:52:44 (742246): wrapper: running run_atlas (--nthreads 8)
[2025-07-19 17:52:44] Arguments: --nthreads 8
[2025-07-19 17:52:44] Threads: 8
[2025-07-19 17:52:44] Checking for CVMFS
[2025-07-19 17:52:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-19 17:52:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-19 17:52:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-19 17:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-19 17:52:46] 2.13.0.0 104956 16279 330384 148519 1 544 40493034 40960001 40655 16776704 0 239140286 99.731 175233934 30486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-19 17:52:46] CVMFS is ok
[2025-07-19 17:52:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-19 17:52:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-19 17:52:46] Further information can be found at the LHC@home message board.
[2025-07-19 17:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-19 17:52:46] Checking for apptainer binary...
[2025-07-19 17:52:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-19 17:52:46] Running /usr/bin/apptainer --version
[2025-07-19 17:52:46] apptainer version 1.4.1-1.el9
[2025-07-19 17:52:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-19 17:52:46] c8-7-4.aglt2.org
[2025-07-19 17:52:46] apptainer works
[2025-07-19 17:52:46] Set ATHENA_PROC_NUMBER=8
[2025-07-19 17:52:46] Set ATHENA_CORE_NUMBER=8
[2025-07-19 17:52:46] Starting ATLAS job with PandaID=6739113166
[2025-07-19 17:52:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-19 19:35:05]  *** The last 200 lines of the pilot log: ***
[2025-07-19 19:35:05]  status_code=0
[2025-07-19 19:35:05]  storage_token=
[2025-07-19 19:35:05]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6739113166/log.45668738._000125.job.log.tgz.1
[2025-07-19 19:35:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/2f/log.45668738._000125.job.log.tgz.1
[2025-07-19 19:35:05]  workdir=None
[2025-07-19 19:35:05] ]
[2025-07-19 19:35:05] 2025-07-19 23:33:55,045 | INFO     | transferring file log.45668738._000125.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6739113166/log.45668738._000125.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-19 19:35:05] 2025-07-19 23:33:55,045 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6739113166/log.45668738._000125.job.log.tgz.1 /tmp/boinchome/slots/1/log.45668738._000125.job
[2025-07-19 19:35:05] 2025-07-19 23:33:55,072 | INFO     | adding to output.list: log.45668738._000125.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/2f/log.45668738._000125.job.log.tg
[2025-07-19 19:35:05] 2025-07-19 23:33:55,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-19 19:35:05] 2025-07-19 23:33:55,072 | INFO     | summary of transferred files:
[2025-07-19 19:35:05] 2025-07-19 23:33:55,072 | INFO     |  -- lfn=log.45668738._000125.job.log.tgz.1, status_code=0, status=transferred
[2025-07-19 19:35:05] 2025-07-19 23:33:55,072 | INFO     | stage-out finished correctly
[2025-07-19 19:35:05] 2025-07-19 23:33:55,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-19 19:35:05] 2025-07-19 23:33:55,411 | INFO     | job 6739113166 has state=finished
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | preparing for final server update for job 6739113166 in state='finished'
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | this job has now completed (state=finished)
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | log transfer has been attempted: DONE
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | job 6739113166 has finished - writing final server update
[2025-07-19 19:35:05] 2025-07-19 23:33:55,412 | INFO     | total number of processed events: 400 (read)
[2025-07-19 19:35:05] 2025-07-19 23:33:55,438 | INFO     | executing command: lscpu
[2025-07-19 19:35:05] 2025-07-19 23:33:55,540 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-19 19:35:05] 2025-07-19 23:33:56,428 | WARNING  | process 779607 can no longer be monitored (due to stat problems) - aborting
[2025-07-19 19:35:05] 2025-07-19 23:33:56,429 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6739113166/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 19:35:05] 2025-07-19 23:33:57,292 | INFO     | number of running child processes to parent process 779607: 1
[2025-07-19 19:35:05] 2025-07-19 23:33:57,292 | INFO     | maximum number of monitored processes: 7
[2025-07-19 19:35:05] 2025-07-19 23:33:59,798 | INFO     | monitor loop #377: job 0:6739113166 is in state 'finished'
[2025-07-19 19:35:05] 2025-07-19 23:33:59,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:05] 2025-07-19 23:34:02,305 | INFO     | monitor loop #378: job 0:6739113166 is in state 'finished'
[2025-07-19 19:35:05] 2025-07-19 23:34:02,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:05] 2025-07-19 23:34:04,816 | INFO     | monitor loop #379: job 0:6739113166 is in state 'finished'
[2025-07-19 19:35:05] 2025-07-19 23:34:04,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,328 | INFO     | monitor loop #380: job 0:6739113166 is in state 'finished'
[2025-07-19 19:35:05] 2025-07-19 23:34:07,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,402 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-19 19:35:05] 2025-07-19 23:34:07,447 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9923593750073
[2025-07-19 19:35:05] 2025-07-19 23:34:07,460 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6739113166/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,461 | INFO     | extracted standard info from prmon json
[2025-07-19 19:35:05] 2025-07-19 23:34:07,461 | INFO     | extracted standard memory fields from prmon json
[2025-07-19 19:35:05] 2025-07-19 23:34:07,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-19 19:35:05] 2025-07-19 23:34:07,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-19 19:35:05] 2025-07-19 23:34:07,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-19 19:35:05] 2025-07-19 23:34:07,462 | INFO     | fitting pss+swap vs Time
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | sum of square deviations: 233641590.0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | sum of deviations: 142228758.99999997
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | mean x: 1752965128.0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | mean y: 2195868.6703296704
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | -- intersect: -1064917459.5933416
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | intersect: -1064917459.5933416
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | chi2: 0.016617313288400916
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | -- intersect: -1064917459.5933416
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | current memory leak: 0.61 B/s (using 91 data points, chi2=0.02)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,463 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | ..............................
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . Timing measurements:
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . get job = 0 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . initial setup = 2 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . payload setup = 24 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . stage-in = 0 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . payload execution = 5970 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . stage-out = 1 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | . log creation = 0 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,464 | INFO     | ..............................
[2025-07-19 19:35:05] 2025-07-19 23:34:07,567 | INFO     | 
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | job summary report
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | --------------------------------------------------
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | PanDA job id: 6739113166
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | task id: 45668738
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | errors: (none)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | pilot state: finished 
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | transexitcode: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | exeerrorcode: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | exeerrordiag: 
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | exitcode: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | exitmsg: OK
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | cpuconsumptiontime: 31166 s
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | nevents: 400
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | neventsw: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | pid: 779607
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | pgrp: 779607
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | corecount: 8
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | event service: False
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | sizes: {0: 2397402, 11: 2397402, 15: 2397692, 22: 2397720, 5998: 2424404, 5999: 2424403, 6000: 2433641, 6013: 2433779}
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | --------------------------------------------------
[2025-07-19 19:35:05] 2025-07-19 23:34:07,568 | INFO     | 
[2025-07-19 19:35:05] 2025-07-19 23:34:07,569 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-19 19:35:05] 2025-07-19 23:34:07,601 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,601 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | job 6739113166 has completed (purged errors)
[2025-07-19 19:35:05] 2025-07-19 23:34:07,602 | INFO     | overall cleanup function is called
[2025-07-19 19:35:05] 2025-07-19 23:34:08,615 | INFO     | --- collectZombieJob: --- 10, [779607]
[2025-07-19 19:35:05] 2025-07-19 23:34:08,615 | INFO     | zombie collector waiting for pid 779607
[2025-07-19 19:35:05] 2025-07-19 23:34:08,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-19 19:35:05] 2025-07-19 23:34:08,615 | INFO     | collected zombie processes
[2025-07-19 19:35:05] 2025-07-19 23:34:08,615 | INFO     | will attempt to kill all subprocesses of pid=779607
[2025-07-19 19:35:05] 2025-07-19 23:34:09,052 | INFO     | PID=749428 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-19 19:35:05] 2025-07-19 23:34:09,052 | INFO     | .. there are 108 such processes running
[2025-07-19 19:35:05] 2025-07-19 23:34:09,949 | INFO     | process IDs to be killed: [779607] (in reverse order)
[2025-07-19 19:35:05] 2025-07-19 23:34:10,173 | WARNING  | found no corresponding commands to process id(s)
[2025-07-19 19:35:05] 2025-07-19 23:34:10,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-19 19:35:05] 2025-07-19 23:34:10,209 | INFO     | did not find any defunct processes belonging to 779607
[2025-07-19 19:35:05] 2025-07-19 23:34:10,241 | INFO     | did not find any defunct processes belonging to 779607
[2025-07-19 19:35:05] 2025-07-19 23:34:10,241 | INFO     | ready for new job
[2025-07-19 19:35:05] 2025-07-19 23:34:10,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-19 19:35:05] 2025-07-19 23:34:10,242 | INFO     | ***************************************
[2025-07-19 19:35:05] 2025-07-19 23:34:10,243 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-19 19:35:05] 2025-07-19 23:34:10,243 | INFO     | ***************************************
[2025-07-19 19:35:05] 2025-07-19 23:34:10,243 | INFO     | 
[2025-07-19 19:35:05] 2025-07-19 23:34:10,261 | INFO     | architecture information:
[2025-07-19 19:35:05] 2025-07-19 23:34:10,262 | INFO     | executing command: cat /etc/os-release
[2025-07-19 19:35:05] 2025-07-19 23:34:10,275 | INFO     | cat /etc/os-release:
[2025-07-19 19:35:05] NAME="CentOS Linux"
[2025-07-19 19:35:05] VERSION="7 (Core)"
[2025-07-19 19:35:05] ID="centos"
[2025-07-19 19:35:05] ID_LIKE="rhel fedora"
[2025-07-19 19:35:05] VERSION_ID="7"
[2025-07-19 19:35:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-19 19:35:05] ANSI_COLOR="0;31"
[2025-07-19 19:35:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-19 19:35:05] HOME_URL="https://www.centos.org/"
[2025-07-19 19:35:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-19 19:35:05] 
[2025-07-19 19:35:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-19 19:35:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-19 19:35:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-19 19:35:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-19 19:35:05] 
[2025-07-19 19:35:05] 2025-07-19 23:34:10,275 | INFO     | ***************************************
[2025-07-19 19:35:05] 2025-07-19 23:34:10,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | INFO     | sufficient remaining disk space (170980802560 B)
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | INFO     | current server update state: UPDATING_FINAL
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | INFO     | update_server=False
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-19 19:35:05] 2025-07-19 23:34:10,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-19 19:35:05] 2025-07-19 23:34:10,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-19 19:35:05] 2025-07-19 23:34:10,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:35:05] 2025-07-19 23:34:10,852 | INFO     | aborting loop
[2025-07-19 19:35:05] 2025-07-19 23:34:11,374 | INFO     | all data control threads have been joined
[2025-07-19 19:35:05] 2025-07-19 23:34:11,805 | INFO     | [job] retrieve thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:11,858 | INFO     | [job] job monitor thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:11,882 | INFO     | all job control threads have been joined
[2025-07-19 19:35:05] 2025-07-19 23:34:11,885 | INFO     | [payload] validate_pre thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,262 | INFO     | [payload] failed_post thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,299 | INFO     | all payload control threads have been joined
[2025-07-19 19:35:05] 2025-07-19 23:34:12,382 | INFO     | [data] control thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,532 | INFO     | [payload] execute_payloads thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:35:05] 2025-07-19 23:34:12,679 | INFO     | [data] copytool_in thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,813 | INFO     | [payload] validate_post thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,817 | INFO     | [data] copytool_out thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:12,888 | INFO     | [job] control thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:13,151 | INFO     | [job] validate thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:13,244 | INFO     | [job] create_data_payload thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:13,305 | INFO     | [payload] control thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:13,599 | INFO     | [job] queue monitor thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:14,807 | INFO     | [data] queue_monitor thread has finished
[2025-07-19 19:35:05] 2025-07-19 23:34:15,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327094490944)>', '<ExcThread(monitor, started 140326748534528)>']
[2025-07-19 19:35:05] 2025-07-19 23:34:20,631 | INFO     | all workflow threads have been joined
[2025-07-19 19:35:05] 2025-07-19 23:34:20,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-19 19:35:05] 2025-07-19 23:34:20,631 | INFO     | traces error code: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:20,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-19 19:35:05] 2025-07-19 23:34:42,017 | INFO     | PID=749428 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | INFO     | .. there are 108 such processes running
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | INFO     | found 0 job(s) in 20 queues
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-19 19:35:05] 2025-07-19 23:34:42,018 | INFO     | [monitor] control thread has ended
[2025-07-19 19:35:05] 2025-07-19 23:34:42,113 [wrapper] ==== pilot stdout END ====
[2025-07-19 19:35:05] 2025-07-19 23:34:42,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-19 19:35:05] 2025-07-19 23:34:42,126 [wrapper] pilotpid: 749428
[2025-07-19 19:35:05] 2025-07-19 23:34:42,135 [wrapper] Pilot exit status: 0
[2025-07-19 19:35:05] 2025-07-19 23:34:42,144 [wrapper] pandaids: 6739113166
[2025-07-19 19:35:05] 2025-07-19 23:34:42,298 [wrapper] cleanup supervisor_pilot 1125144 749429
[2025-07-19 19:35:05] 2025-07-19 23:34:42,300 [wrapper] Test setup, not cleaning
[2025-07-19 19:35:05] 2025-07-19 23:34:42,303 [wrapper] apfmon messages muted
[2025-07-19 19:35:05] 2025-07-19 23:34:42,308 [wrapper] ==== wrapper stdout END ====
[2025-07-19 19:35:05] 2025-07-19 23:34:42,311 [wrapper] ==== wrapper stderr END ====
[2025-07-19 19:35:05]  *** Error codes and diagnostics ***
[2025-07-19 19:35:05]     "exeErrorCode": 0,
[2025-07-19 19:35:05]     "exeErrorDiag": "",
[2025-07-19 19:35:05]     "pilotErrorCode": 0,
[2025-07-19 19:35:05]     "pilotErrorDiag": "",
[2025-07-19 19:35:05]  *** Listing of results directory ***
[2025-07-19 19:35:05] total 524124
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas    530466 Jul 19 17:46 pilot3.tar.gz
[2025-07-19 19:35:05] -rwx------. 1 boincer umatlas     36292 Jul 19 17:50 runpilot2-wrapper.sh
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas      5112 Jul 19 17:50 queuedata.json
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas       100 Jul 19 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-19 19:35:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 19 17:52 run_atlas
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas       105 Jul 19 17:52 job.xml
[2025-07-19 19:35:05] -rw-r--r--. 2 boincer umatlas 306715435 Jul 19 17:52 EVNT.45668735._000002.pool.root.1
[2025-07-19 19:35:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:52 start_atlas.sh
[2025-07-19 19:35:05] drwxrwx--x. 2 boincer umatlas      4096 Jul 19 17:52 shared
[2025-07-19 19:35:05] -rw-r--r--. 2 boincer umatlas    542856 Jul 19 17:52 input.tar.gz
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas         0 Jul 19 17:52 boinc_lockfile
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas      2510 Jul 19 17:52 pandaJob.out
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas    978446 Jul 19 17:53 agis_schedconf.cvmfs.json
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas   1593055 Jul 19 17:53 agis_ddmendpoints.agis.ALL.json
[2025-07-19 19:35:05] drwx------. 4 boincer umatlas      4096 Jul 19 17:53 pilot3
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas      7159 Jul 19 19:29 init_data.xml
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas 224412366 Jul 19 19:32 HITS.45668738._000125.pool.root.1
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas       529 Jul 19 19:32 boinc_task_state.xml
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas      1030 Jul 19 19:33 memory_monitor_summary.json
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas    331031 Jul 19 19:33 log.45668738._000125.job.log.tgz.1
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas      7770 Jul 19 19:34 heartbeat.json
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas        95 Jul 19 19:34 pilot_heartbeat.json
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas       823 Jul 19 19:34 pilotlog.txt
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas    521794 Jul 19 19:34 log.45668738._000125.job.log.1
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas       357 Jul 19 19:34 output.list
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas       620 Jul 19 19:34 runtime_log
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas    870400 Jul 19 19:34 result.tar.gz
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas      8650 Jul 19 19:34 runtime_log.err
[2025-07-19 19:35:05] -rw-------. 1 boincer umatlas       650 Jul 19 19:34 bKILDmkcUx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgWFLDmxYNE2n.diag
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas        27 Jul 19 19:35 wrapper_checkpoint.txt
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas      8192 Jul 19 19:35 boinc_mmap_file
[2025-07-19 19:35:05] -rw-r--r--. 1 boincer umatlas     22274 Jul 19 19:35 stderr.txt
[2025-07-19 19:35:06] HITS file was successfully produced:
[2025-07-19 19:35:06] -rw-------. 1 boincer umatlas 224412366 Jul 19 19:32 shared/HITS.pool.root.1
[2025-07-19 19:35:06]  *** Contents of shared directory: ***
[2025-07-19 19:35:06] total 520088
[2025-07-19 19:35:06] -rw-r--r--. 2 boincer umatlas 306715435 Jul 19 17:52 ATLAS.root_0
[2025-07-19 19:35:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:52 start_atlas.sh
[2025-07-19 19:35:06] -rw-r--r--. 2 boincer umatlas    542856 Jul 19 17:52 input.tar.gz
[2025-07-19 19:35:06] -rw-------. 1 boincer umatlas 224412366 Jul 19 19:32 HITS.pool.root.1
[2025-07-19 19:35:06] -rw-------. 1 boincer umatlas    870400 Jul 19 19:34 result.tar.gz
19:35:07 (742246): run_atlas exited; CPU time 31428.455720
19:35:07 (742246): called boinc_finish(0)

</stderr_txt>
]]>

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