Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:52:34 (741108): wrapper (7.7.26015): starting
17:52:34 (741108): wrapper: running run_atlas (--nthreads 8)
[2025-07-19 17:52:34] Arguments: --nthreads 8
[2025-07-19 17:52:34] Threads: 8
[2025-07-19 17:52:34] Checking for CVMFS
[2025-07-19 17:52:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-19 17:52:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-19 17:52:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-19 17:52:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-19 17:52:35] 2.13.0.0 104956 16278 330384 148519 2 544 40492690 40960001 40638 16776704 0 239137930 99.731 175233745 30486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-19 17:52:35] CVMFS is ok
[2025-07-19 17:52:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-19 17:52:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-19 17:52:35] Further information can be found at the LHC@home message board.
[2025-07-19 17:52:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-19 17:52:35] Checking for apptainer binary...
[2025-07-19 17:52:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-19 17:52:35] Running /usr/bin/apptainer --version
[2025-07-19 17:52:35] apptainer version 1.4.1-1.el9
[2025-07-19 17:52:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-19 17:52:36] c8-7-4.aglt2.org
[2025-07-19 17:52:36] apptainer works
[2025-07-19 17:52:36] Set ATHENA_PROC_NUMBER=8
[2025-07-19 17:52:36] Set ATHENA_CORE_NUMBER=8
[2025-07-19 17:52:36] Starting ATLAS job with PandaID=6739113090
[2025-07-19 17:52:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-19 19:36:04]  *** The last 200 lines of the pilot log: ***
[2025-07-19 19:36:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/bc/log.45668738._000049.job.log.tgz.1
[2025-07-19 19:36:04]  workdir=None
[2025-07-19 19:36:04] ]
[2025-07-19 19:36:04] 2025-07-19 23:35:15,089 | INFO     | monitor loop #383: job 0:6739113090 is in state 'stageout'
[2025-07-19 19:36:04] 2025-07-19 23:35:15,089 | WARNING  | aborting job monitor tasks since payload process 778483 is not running
[2025-07-19 19:36:04] 2025-07-19 23:35:15,101 | INFO     | transferring file log.45668738._000049.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6739113090/log.45668738._000049.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-19 19:36:04] 2025-07-19 23:35:15,101 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6739113090/log.45668738._000049.job.log.tgz.1 /tmp/boinchome/slots/0/log.45668738._000049.job
[2025-07-19 19:36:04] 2025-07-19 23:35:15,135 | INFO     | adding to output.list: log.45668738._000049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/bc/log.45668738._000049.job.log.tg
[2025-07-19 19:36:04] 2025-07-19 23:35:15,136 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-19 19:36:04] 2025-07-19 23:35:15,136 | INFO     | summary of transferred files:
[2025-07-19 19:36:04] 2025-07-19 23:35:15,136 | INFO     |  -- lfn=log.45668738._000049.job.log.tgz.1, status_code=0, status=transferred
[2025-07-19 19:36:04] 2025-07-19 23:35:15,136 | INFO     | stage-out finished correctly
[2025-07-19 19:36:04] 2025-07-19 23:35:15,337 | INFO     | PID=748091 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-19 19:36:04] 2025-07-19 23:35:15,338 | INFO     | .. there are 107 such processes running
[2025-07-19 19:36:04] 2025-07-19 23:35:16,339 | INFO     | 6127s have passed since pilot start - server update state is 'RUNNING'
[2025-07-19 19:36:04] 2025-07-19 23:35:17,593 | INFO     | monitor loop #384: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:17,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:17,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-19 19:36:04] 2025-07-19 23:35:19,087 | INFO     | job 6739113090 has state=finished
[2025-07-19 19:36:04] 2025-07-19 23:35:19,087 | INFO     | preparing for final server update for job 6739113090 in state='finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:19,087 | INFO     | this job has now completed (state=finished)
[2025-07-19 19:36:04] 2025-07-19 23:35:19,087 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-19 19:36:04] 2025-07-19 23:35:19,088 | INFO     | log transfer has been attempted: DONE
[2025-07-19 19:36:04] 2025-07-19 23:35:19,088 | INFO     | job 6739113090 has finished - writing final server update
[2025-07-19 19:36:04] 2025-07-19 23:35:19,088 | INFO     | total number of processed events: 400 (read)
[2025-07-19 19:36:04] 2025-07-19 23:35:19,089 | INFO     | executing command: lscpu
[2025-07-19 19:36:04] 2025-07-19 23:35:19,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-19 19:36:04] 2025-07-19 23:35:20,104 | INFO     | monitor loop #385: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:20,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:22,610 | INFO     | monitor loop #386: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:22,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:25,115 | INFO     | monitor loop #387: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:25,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:27,619 | INFO     | monitor loop #388: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:27,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,124 | INFO     | monitor loop #389: job 0:6739113090 is in state 'finished'
[2025-07-19 19:36:04] 2025-07-19 23:35:30,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,284 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-19 19:36:04] 2025-07-19 23:35:30,289 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.992117187503
[2025-07-19 19:36:04] 2025-07-19 23:35:30,302 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6739113090/memory_monitor_summary.json (trf name=prmon)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,303 | INFO     | extracted standard info from prmon json
[2025-07-19 19:36:04] 2025-07-19 23:35:30,303 | INFO     | extracted standard memory fields from prmon json
[2025-07-19 19:36:04] 2025-07-19 23:35:30,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-19 19:36:04] 2025-07-19 23:35:30,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-19 19:36:04] 2025-07-19 23:35:30,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-19 19:36:04] 2025-07-19 23:35:30,304 | INFO     | fitting pss+swap vs Time
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | sum of square deviations: 241429643.0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | sum of deviations: 798120279.0000001
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | mean x: 1752965158.5
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | mean y: 2174074.1739130435
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | -- intersect: -5792793867.601569
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | intersect: -5792793867.601569
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | chi2: 0.03922155496248028
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | -- intersect: -5792793867.601569
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | current memory leak: 3.31 B/s (using 92 data points, chi2=0.04)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,305 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | ..............................
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . Timing measurements:
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . get job = 0 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . initial setup = 3 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . payload setup = 25 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . stage-in = 0 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . payload execution = 6052 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . stage-out = 1 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | . log creation = 0 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,307 | INFO     | ..............................
[2025-07-19 19:36:04] 2025-07-19 23:35:30,804 | INFO     | 
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | job summary report
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | --------------------------------------------------
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | PanDA job id: 6739113090
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | task id: 45668738
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | errors: (none)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | pilot state: finished 
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | transexitcode: 0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | exeerrorcode: 0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | exeerrordiag: 
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | exitcode: 0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | exitmsg: OK
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | cpuconsumptiontime: 31732 s
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | nevents: 400
[2025-07-19 19:36:04] 2025-07-19 23:35:30,805 | INFO     | neventsw: 0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | pid: 778483
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | pgrp: 778483
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | corecount: 8
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | event service: False
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | sizes: {0: 2397227, 1: 2397426, 11: 2397426, 16: 2397716, 22: 2397744, 6082: 2424589, 6083: 2433587, 6086: 2433643, 6098: 2433837}
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | --------------------------------------------------
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | 
[2025-07-19 19:36:04] 2025-07-19 23:35:30,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,857 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-19 19:36:04] 2025-07-19 23:35:30,857 | INFO     | job 6739113090 has completed (purged errors)
[2025-07-19 19:36:04] 2025-07-19 23:35:30,857 | INFO     | overall cleanup function is called
[2025-07-19 19:36:04] 2025-07-19 23:35:31,869 | INFO     | --- collectZombieJob: --- 10, [778483]
[2025-07-19 19:36:04] 2025-07-19 23:35:31,870 | INFO     | zombie collector waiting for pid 778483
[2025-07-19 19:36:04] 2025-07-19 23:35:31,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-19 19:36:04] 2025-07-19 23:35:31,870 | INFO     | collected zombie processes
[2025-07-19 19:36:04] 2025-07-19 23:35:31,870 | INFO     | will attempt to kill all subprocesses of pid=778483
[2025-07-19 19:36:04] 2025-07-19 23:35:32,512 | INFO     | process IDs to be killed: [778483] (in reverse order)
[2025-07-19 19:36:04] 2025-07-19 23:35:32,728 | WARNING  | found no corresponding commands to process id(s)
[2025-07-19 19:36:04] 2025-07-19 23:35:32,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-19 19:36:04] 2025-07-19 23:35:32,760 | INFO     | did not find any defunct processes belonging to 778483
[2025-07-19 19:36:04] 2025-07-19 23:35:32,790 | INFO     | did not find any defunct processes belonging to 778483
[2025-07-19 19:36:04] 2025-07-19 23:35:32,790 | INFO     | ready for new job
[2025-07-19 19:36:04] 2025-07-19 23:35:32,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-19 19:36:04] 2025-07-19 23:35:32,792 | INFO     | ***************************************
[2025-07-19 19:36:04] 2025-07-19 23:35:32,793 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-19 19:36:04] 2025-07-19 23:35:32,793 | INFO     | ***************************************
[2025-07-19 19:36:04] 2025-07-19 23:35:32,793 | INFO     | 
[2025-07-19 19:36:04] 2025-07-19 23:35:32,812 | INFO     | architecture information:
[2025-07-19 19:36:04] 2025-07-19 23:35:32,812 | INFO     | executing command: cat /etc/os-release
[2025-07-19 19:36:04] 2025-07-19 23:35:32,828 | INFO     | cat /etc/os-release:
[2025-07-19 19:36:04] NAME="CentOS Linux"
[2025-07-19 19:36:04] VERSION="7 (Core)"
[2025-07-19 19:36:04] ID="centos"
[2025-07-19 19:36:04] ID_LIKE="rhel fedora"
[2025-07-19 19:36:04] VERSION_ID="7"
[2025-07-19 19:36:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-19 19:36:04] ANSI_COLOR="0;31"
[2025-07-19 19:36:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-19 19:36:04] HOME_URL="https://www.centos.org/"
[2025-07-19 19:36:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-19 19:36:04] 
[2025-07-19 19:36:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-19 19:36:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-19 19:36:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-19 19:36:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-19 19:36:04] 
[2025-07-19 19:36:04] 2025-07-19 23:35:32,829 | INFO     | ***************************************
[2025-07-19 19:36:04] 2025-07-19 23:35:33,335 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-19 19:36:04] 2025-07-19 23:35:33,392 | INFO     | sufficient remaining disk space (171616239616 B)
[2025-07-19 19:36:04] 2025-07-19 23:35:33,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-19 19:36:04] 2025-07-19 23:35:33,392 | INFO     | current server update state: UPDATING_FINAL
[2025-07-19 19:36:04] 2025-07-19 23:35:33,392 | INFO     | update_server=False
[2025-07-19 19:36:04] 2025-07-19 23:35:33,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-19 19:36:04] 2025-07-19 23:35:33,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-19 19:36:04] 2025-07-19 23:35:33,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-19 19:36:04] 2025-07-19 23:35:33,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:36:04] 2025-07-19 23:35:33,642 | INFO     | aborting loop
[2025-07-19 19:36:04] 2025-07-19 23:35:33,952 | INFO     | all data control threads have been joined
[2025-07-19 19:36:04] 2025-07-19 23:35:34,070 | INFO     | all job control threads have been joined
[2025-07-19 19:36:04] 2025-07-19 23:35:34,400 | INFO     | [job] retrieve thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,420 | INFO     | [payload] validate_pre thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,451 | INFO     | [payload] execute_payloads thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,462 | INFO     | [data] copytool_in thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,646 | INFO     | all payload control threads have been joined
[2025-07-19 19:36:04] 2025-07-19 23:35:34,648 | INFO     | [job] job monitor thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,951 | INFO     | [payload] failed_post thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:34,959 | INFO     | [data] control thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,020 | INFO     | [job] create_data_payload thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,076 | INFO     | [job] control thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,258 | INFO     | [job] validate thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-19 19:36:04] 2025-07-19 23:35:35,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,399 | INFO     | [data] copytool_out thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,651 | INFO     | [payload] control thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:35,881 | INFO     | [payload] validate_post thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:36,386 | INFO     | [job] queue monitor thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:37,401 | INFO     | [data] queue_monitor thread has finished
[2025-07-19 19:36:04] 2025-07-19 23:35:38,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995262412608)>', '<ExcThread(monitor, started 139994786162432)>']
[2025-07-19 19:36:04] 2025-07-19 23:35:43,192 | INFO     | all workflow threads have been joined
[2025-07-19 19:36:04] 2025-07-19 23:35:43,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-19 19:36:04] 2025-07-19 23:35:43,193 | INFO     | traces error code: 0
[2025-07-19 19:36:04] 2025-07-19 23:35:43,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-19 19:36:04] 2025-07-19 23:36:04,249 | INFO     | PID=748091 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-19 19:36:04] 2025-07-19 23:36:04,250 | INFO     | .. there are 105 such processes running
[2025-07-19 19:36:04] 2025-07-19 23:36:04,251 | INFO     | found 0 job(s) in 20 queues
[2025-07-19 19:36:04] 2025-07-19 23:36:04,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-19 19:36:04] 2025-07-19 23:36:04,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-19 19:36:04] 2025-07-19 23:36:04,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-19 19:36:04] 2025-07-19 23:36:04,251 | INFO     | [monitor] control thread has ended
[2025-07-19 19:36:04] 2025-07-19 23:36:04,367 [wrapper] ==== pilot stdout END ====
[2025-07-19 19:36:04] 2025-07-19 23:36:04,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-19 19:36:04] 2025-07-19 23:36:04,379 [wrapper] pilotpid: 748091
[2025-07-19 19:36:04] 2025-07-19 23:36:04,384 [wrapper] Pilot exit status: 0
[2025-07-19 19:36:04] 2025-07-19 23:36:04,424 [wrapper] pandaids: 6739113090
[2025-07-19 19:36:04] 2025-07-19 23:36:04,609 [wrapper] cleanup supervisor_pilot 1124672 748092
[2025-07-19 19:36:04] 2025-07-19 23:36:04,612 [wrapper] Test setup, not cleaning
[2025-07-19 19:36:04] 2025-07-19 23:36:04,614 [wrapper] apfmon messages muted
[2025-07-19 19:36:04] 2025-07-19 23:36:04,624 [wrapper] ==== wrapper stdout END ====
[2025-07-19 19:36:04] 2025-07-19 23:36:04,627 [wrapper] ==== wrapper stderr END ====
[2025-07-19 19:36:04]  *** Error codes and diagnostics ***
[2025-07-19 19:36:04]     "exeErrorCode": 0,
[2025-07-19 19:36:04]     "exeErrorDiag": "",
[2025-07-19 19:36:04]     "pilotErrorCode": 0,
[2025-07-19 19:36:04]     "pilotErrorDiag": "",
[2025-07-19 19:36:04]  *** Listing of results directory ***
[2025-07-19 19:36:04] total 528584
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 19 17:46 pilot3.tar.gz
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 19 17:49 queuedata.json
[2025-07-19 19:36:04] -rwx------. 1 boincer umatlas     36292 Jul 19 17:50 runpilot2-wrapper.sh
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas       100 Jul 19 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-19 19:36:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 19 17:52 run_atlas
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas       105 Jul 19 17:52 job.xml
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas 303750213 Jul 19 17:52 EVNT.45668735._000008.pool.root.1
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:52 start_atlas.sh
[2025-07-19 19:36:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 19 17:52 shared
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas    542862 Jul 19 17:52 input.tar.gz
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas         0 Jul 19 17:52 boinc_lockfile
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas      2508 Jul 19 17:52 pandaJob.out
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas    978446 Jul 19 17:53 agis_schedconf.cvmfs.json
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas   1593055 Jul 19 17:53 agis_ddmendpoints.agis.ALL.json
[2025-07-19 19:36:04] drwx------. 4 boincer umatlas      4096 Jul 19 17:53 pilot3
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas      7159 Jul 19 19:29 init_data.xml
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas 231931817 Jul 19 19:34 HITS.45668738._000049.pool.root.1
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas       529 Jul 19 19:34 boinc_task_state.xml
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas      1031 Jul 19 19:35 memory_monitor_summary.json
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas    329922 Jul 19 19:35 log.45668738._000049.job.log.tgz.1
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas      7776 Jul 19 19:35 heartbeat.json
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas        27 Jul 19 19:36 wrapper_checkpoint.txt
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 19 19:36 boinc_mmap_file
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas       823 Jul 19 19:36 pilotlog.txt
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas        95 Jul 19 19:36 pilot_heartbeat.json
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas    528132 Jul 19 19:36 log.45668738._000049.job.log.1
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas       357 Jul 19 19:36 output.list
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas       620 Jul 19 19:36 runtime_log
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas    880640 Jul 19 19:36 result.tar.gz
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas       652 Jul 19 19:36 tSvKDmicUx7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6VFLDmBdgAYo.diag
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas      8650 Jul 19 19:36 runtime_log.err
[2025-07-19 19:36:04] -rw-r--r--. 1 boincer umatlas     22470 Jul 19 19:36 stderr.txt
[2025-07-19 19:36:04] HITS file was successfully produced:
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas 231931817 Jul 19 19:34 shared/HITS.pool.root.1
[2025-07-19 19:36:04]  *** Contents of shared directory: ***
[2025-07-19 19:36:04] total 524544
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas 303750213 Jul 19 17:52 ATLAS.root_0
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 19 17:52 start_atlas.sh
[2025-07-19 19:36:04] -rw-r--r--. 2 boincer umatlas    542862 Jul 19 17:52 input.tar.gz
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas 231931817 Jul 19 19:34 HITS.pool.root.1
[2025-07-19 19:36:04] -rw-------. 1 boincer umatlas    880640 Jul 19 19:36 result.tar.gz
19:36:06 (741108): run_atlas exited; CPU time 31967.351026
19:36:06 (741108): called boinc_finish(0)

</stderr_txt>
]]>

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