Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-20 00:52:15 (16836): Detected: vboxwrapper 26206
2025-07-20 00:52:15 (16836): Detected: BOINC client v7.16.5
2025-07-20 00:52:15 (16836): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-07-20 00:52:16 (16836): Successfully copied 'init_data.xml' to the shared directory.
2025-07-20 00:52:16 (16836): Create VM. (boinc_4e0367c3316da542, slot#4)
2025-07-20 00:52:17 (16836): Setting Memory Size for VM. (4400MB)
2025-07-20 00:52:17 (16836): Setting CPU Count for VM. (4)
2025-07-20 00:52:17 (16836): Setting Chipset Options for VM.
2025-07-20 00:52:17 (16836): Setting Graphics Controller Options for VM.
2025-07-20 00:52:18 (16836): Setting Boot Options for VM.
2025-07-20 00:52:18 (16836): Setting Network Configuration for NAT.
2025-07-20 00:52:18 (16836): Enabling VM Network Access.
2025-07-20 00:52:18 (16836): Disabling USB Support for VM.
2025-07-20 00:52:19 (16836): Disabling COM Port Support for VM.
2025-07-20 00:52:19 (16836): Disabling LPT Port Support for VM.
2025-07-20 00:52:19 (16836): Disabling Audio Support for VM.
2025-07-20 00:52:19 (16836): Disabling Clipboard Support for VM.
2025-07-20 00:52:20 (16836): Disabling Drag and Drop Support for VM.
2025-07-20 00:52:20 (16836): Adding storage controller(s) to VM.
2025-07-20 00:52:20 (16836): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-20 00:52:21 (16836): Adding VirtualBox Guest Additions to VM.
2025-07-20 00:52:21 (16836): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-20 00:52:21 (16836): forwarding host port 65283 to guest port 80
2025-07-20 00:52:22 (16836): Enabling remote desktop for VM.
2025-07-20 00:52:22 (16836): Enabling shared directory for VM.
2025-07-20 00:52:23 (16836): Starting VM using VBoxManage interface. (boinc_4e0367c3316da542, slot#4)
2025-07-20 00:52:27 (16836): Successfully started VM. (PID = '7092')
2025-07-20 00:52:27 (16836): Reporting VM Process ID to BOINC.
2025-07-20 00:52:27 (16836): Guest Log: BIOS: VirtualBox 5.2.44
2025-07-20 00:52:27 (16836): Guest Log: CPUID EDX: 0x178bfbff
2025-07-20 00:52:27 (16836): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-20 00:52:27 (16836): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-20 00:52:27 (16836): Detected: Web Application Enabled (http://localhost:65283)
2025-07-20 00:52:27 (16836): Detected: Remote Desktop Enabled (localhost:65284)
2025-07-20 00:52:27 (16836): Preference change detected
2025-07-20 00:52:27 (16836): Setting CPU throttle for VM. (100%)
2025-07-20 00:52:27 (16836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-20 00:52:29 (16836): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-20 00:52:29 (16836): Guest Log: BIOS: Booting from Hard Disk...
2025-07-20 00:52:32 (16836): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-20 00:52:32 (16836): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-20 00:52:32 (16836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-20 00:52:38 (16836): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-20 00:52:38 (16836): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-20 00:52:45 (16836): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000180 main     Log opened 2025-07-20T00:52:44.158531000Z
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000305 main     OS Product: Linux
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000375 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000402 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000403 main     Process ID: 1301
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.000404 main     Package type: LINUX_64BITS_GENERIC
2025-07-20 00:52:45 (16836): Guest Log: 00:00:00.001565 main     5.2.32 r132073 started. Verbose level = 0
2025-07-20 00:52:45 (16836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-20 00:52:45 (16836): Guest Log: [INFO] Mounting shared directory
2025-07-20 00:52:45 (16836): Guest Log: [INFO] Checking for init_data.xml
2025-07-20 00:52:54 (16836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-20 00:52:54 (16836): Guest Log: [INFO] Detected branch: prod
2025-07-20 00:52:55 (16836): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-20 00:52:55 (16836): Guest Log: Copying input files
2025-07-20 00:52:55 (16836): Guest Log: 00:00:10.003335 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 793 379 000ns (GuestNow=1 752 961 975 368 134 000 ns GuestLast=1 752 972 764 161 513 000 ns fSetTimeLastLoop=true )
2025-07-20 00:52:58 (16836): Guest Log: Copied input files into RunAtlas.
2025-07-20 00:52:58 (16836): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-20 00:52:58 (16836): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-20 00:52:58 (16836): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-20 00:52:58 (16836): Guest Log: Further information can be found at the LHC@home message board.
2025-07-20 00:53:12 (16836): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-20 00:53:12 (16836): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-20 00:53:12 (16836): Guest Log: 2.6.3.0 1579 0 32220 148519 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-20 00:53:13 (16836): Guest Log: copied the webapp to /var/www
2025-07-20 00:53:14 (16836): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-20 00:53:14 (16836): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-20 00:53:14 (16836): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-20 00:53:15 (16836): Guest Log:  *** Starting ATLAS job. (PandaID=6739113140 taskID=45668738) ***
2025-07-20 02:32:31 (16836): Status Report: Elapsed Time: '6000.000000'
2025-07-20 02:32:31 (16836): Status Report: CPU Time: '20762.515625'
2025-07-20 04:12:34 (16836): Status Report: Elapsed Time: '12000.000000'
2025-07-20 04:12:34 (16836): Status Report: CPU Time: '44495.437500'
2025-07-20 05:44:19 (16836): Guest Log:  *** Job finished ***
2025-07-20 05:44:19 (16836): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:07,056 | INFO     | [data] queue_monitor thread has finished
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:10,689 | INFO     | job.realtimelogging is not enabled
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:11,691 | INFO     | [payload] run_realtimelog thread has finished
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:11,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726632118080)>', '<ExcThread(monitor, started 139725729941248)>']
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:12,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:12,531 | INFO     | [monitor] control thread has ended
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,867 | INFO     | all workflow threads have been joined
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,867 | INFO     | end of generic workflow (traces error code: 0)
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,868 | INFO     | traces error code: 0
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,959 [wrapper] ==== pilot stdout END ====
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,964 [wrapper] ==== wrapper stdout RESUME ====
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,968 [wrapper] pilotpid: 5912
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:16,973 [wrapper] Pilot exit status: 0
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,022 [wrapper] pandaids: 6739113140
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,062 [wrapper] cleanup supervisor_pilot 17567 5913
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,070 [wrapper] Test setup, not cleaning
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,075 [wrapper] apfmon messages muted
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,080 [wrapper] ==== wrapper stdout END ====
2025-07-20 05:44:19 (16836): Guest Log: 2025-07-20 02:44:17,085 [wrapper] ==== wrapper stderr END ====
2025-07-20 05:44:19 (16836): Guest Log:  *** Error codes and diagnostics ***
2025-07-20 05:44:19 (16836): Guest Log:     "exeErrorCode": 0,
2025-07-20 05:44:19 (16836): Guest Log:     "exeErrorDiag": "",
2025-07-20 05:44:19 (16836): Guest Log:     "pilotErrorCode": 0,
2025-07-20 05:44:19 (16836): Guest Log:     "pilotErrorDiag": "",
2025-07-20 05:44:19 (16836): Guest Log:  *** Listing of results directory ***
2025-07-20 05:44:19 (16836): Guest Log: total 223240
2025-07-20 05:44:19 (16836): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 19 21:46 pilot3.tar.gz
2025-07-20 05:44:19 (16836): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 19 21:49 runpilot2-wrapper.sh
2025-07-20 05:44:19 (16836): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 19 21:49 queuedata.json
2025-07-20 05:44:19 (16836): Guest Log: -rwxr-xr-x. 1 atlas atlas      8857 Jul 19 21:52 init_data.xml
2025-07-20 05:44:19 (16836): Guest Log: -rwxr-xr-x. 1 atlas atlas    542859 Jul 19 21:52 input.tar.gz
2025-07-20 05:44:19 (16836): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 19 21:52 start_atlas.sh
2025-07-20 05:44:19 (16836): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 19 21:52 EVNT.45668735._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-07-20 05:44:19 (16836): Guest Log: -rw-r--r--. 1 atlas atlas      2507 Jul 19 21:53 pandaJob.out
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas    978446 Jul 19 21:55 agis_schedconf.cvmfs.json
2025-07-20 05:44:19 (16836): Guest Log: drwx------. 4 atlas atlas      4096 Jul 19 21:55 pilot3
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas 221179915 Jul 20 02:43 HITS.45668738._000099.pool.root.1
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas      1034 Jul 20 02:43 memory_monitor_summary.json
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas        95 Jul 20 02:43 pilot_heartbeat.json
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas   1593055 Jul 20 02:43 agis_ddmendpoints.agis.ALL.json
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas    364828 Jul 20 02:43 log.45668738._000099.job.log.tgz.1
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas      7815 Jul 20 02:43 heartbeat.json
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 20 02:44 pilotlog.txt
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas   1441491 Jul 20 02:44 log.45668738._000099.job.log.1
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas       357 Jul 20 02:44 output.list
2025-07-20 05:44:19 (16836): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 20 02:44 runtime_log
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas   1822720 Jul 20 02:44 result.tar.gz
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas       671 Jul 20 02:44 ztrNDmScUx7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuYsKDmTPzxUm.diag
2025-07-20 05:44:19 (16836): Guest Log: -rw-r--r--. 1 atlas atlas      8636 Jul 20 02:44 runtime_log.err
2025-07-20 05:44:19 (16836): Guest Log: Looking for outputfile HITS.45668738._000099.pool.root.1
2025-07-20 05:44:19 (16836): Guest Log: HITS file was successfully produced
2025-07-20 05:44:19 (16836): Guest Log: -rw-------. 1 atlas atlas 221179915 Jul 20 02:43 /home/atlas/RunAtlas/HITS.45668738._000099.pool.root.1
2025-07-20 05:44:20 (16836): Guest Log: Successfully finished the ATLAS job!
2025-07-20 05:44:20 (16836): Guest Log: Copying the results back to the shared directory!
2025-07-20 05:44:21 (16836): Guest Log:  *** Contents of shared directory: ***
2025-07-20 05:44:21 (16836): Guest Log: total 515892
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root 304690497 Jul 19 21:52 ATLAS.root_0
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root 221179915 Jul 20 02:44 HITS.pool.root.1
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root      8857 Jul 19 21:52 init_data.xml
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root    542859 Jul 19 21:51 input.tar.gz
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root   1822720 Jul 20 02:44 result.tar.gz
2025-07-20 05:44:21 (16836): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 19 21:51 start_atlas.sh
2025-07-20 05:44:21 (16836): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-20 05:44:21 (16836): VM Completion File Detected.
2025-07-20 05:44:21 (16836): Powering off VM.
2025-07-20 05:44:21 (16836): Successfully stopped VM.
2025-07-20 05:44:21 (16836): Deregistering VM. (boinc_4e0367c3316da542, slot#4)
2025-07-20 05:44:21 (16836): Removing network bandwidth throttle group from VM.
2025-07-20 05:44:22 (16836): Removing VM from VirtualBox.
05:44:27 (16836): called boinc_finish(0)

</stderr_txt>
]]>

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