Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:26 (3526571): wrapper (7.7.26015): starting
19:39:26 (3526571): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 19:39:26] Arguments: --nthreads 8
[2025-07-14 19:39:26] Threads: 8
[2025-07-14 19:39:26] Checking for CVMFS
[2025-07-14 19:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 19:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 19:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 19:39:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 19:39:27] 2.13.0.0 2849342 312 116428 148337 3 59 24891217 32935937 22695 16776704 0 733218 99.959 152410 44839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 19:39:27] CVMFS is ok
[2025-07-14 19:39:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 19:39:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 19:39:27] Further information can be found at the LHC@home message board.
[2025-07-14 19:39:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 19:39:27] Checking for apptainer binary...
[2025-07-14 19:39:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 19:39:27] Running /usr/bin/apptainer --version
[2025-07-14 19:39:27] apptainer version 1.4.1-1.el9
[2025-07-14 19:39:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 19:39:27] c6-8-25-4.aglt2.org
[2025-07-14 19:39:27] apptainer works
[2025-07-14 19:39:27] Set ATHENA_PROC_NUMBER=8
[2025-07-14 19:39:27] Set ATHENA_CORE_NUMBER=8
[2025-07-14 19:39:27] Starting ATLAS job with PandaID=6720826257
[2025-07-14 19:39:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 22:25:40]  *** The last 200 lines of the pilot log: ***
[2025-07-14 22:25:40] 2025-07-15 02:25:05,665 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2454.7914895833333
[2025-07-14 22:25:40] 2025-07-15 02:25:05,685 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720826257/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,687 | INFO     | extracted standard info from prmon json
[2025-07-14 22:25:40] 2025-07-15 02:25:05,687 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 22:25:40] 2025-07-15 02:25:05,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 22:25:40] 2025-07-15 02:25:05,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 22:25:40] 2025-07-15 02:25:05,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 22:25:40] 2025-07-15 02:25:05,693 | INFO     | fitting pss+swap vs Time
[2025-07-14 22:25:40] 2025-07-15 02:25:05,694 | INFO     | sum of square deviations: 1318304770.1975265
[2025-07-14 22:25:40] 2025-07-15 02:25:05,695 | INFO     | sum of deviations: -18677585502.18519
[2025-07-14 22:25:40] 2025-07-15 02:25:05,696 | INFO     | mean x: 1752541332.5432098
[2025-07-14 22:25:40] 2025-07-15 02:25:05,696 | INFO     | mean y: 2237110.2407407407
[2025-07-14 22:25:40] 2025-07-15 02:25:05,696 | INFO     | -- intersect: 24832034684.124073
[2025-07-14 22:25:40] 2025-07-15 02:25:05,696 | INFO     | intersect: 24832034684.124073
[2025-07-14 22:25:40] 2025-07-15 02:25:05,697 | INFO     | chi2: 3.4430866096300066
[2025-07-14 22:25:40] 2025-07-15 02:25:05,697 | INFO     | sum of square deviations: 1199969802.687902
[2025-07-14 22:25:40] 2025-07-15 02:25:05,698 | INFO     | sum of deviations: -6391207942.656044
[2025-07-14 22:25:40] 2025-07-15 02:25:05,699 | INFO     | mean x: 1752541180.044586
[2025-07-14 22:25:40] 2025-07-15 02:25:05,699 | INFO     | mean y: 2252638.5222929935
[2025-07-14 22:25:40] 2025-07-15 02:25:05,699 | INFO     | -- intersect: 9336533455.125446
[2025-07-14 22:25:40] 2025-07-15 02:25:05,699 | INFO     | intersect: 9336533455.125446
[2025-07-14 22:25:40] 2025-07-15 02:25:05,699 | INFO     | chi2: 2.586678443704862
[2025-07-14 22:25:40] 2025-07-15 02:25:05,700 | INFO     | current chi2=2.586678443704862 (change=24.873268175416992 %)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,700 | INFO     | right removable region: 156
[2025-07-14 22:25:40] 2025-07-15 02:25:05,700 | INFO     | sum of square deviations: 1199965532.687902
[2025-07-14 22:25:40] 2025-07-15 02:25:05,701 | INFO     | sum of deviations: -49335757668.47773
[2025-07-14 22:25:40] 2025-07-15 02:25:05,701 | INFO     | mean x: 1752541485.044586
[2025-07-14 22:25:40] 2025-07-15 02:25:05,701 | INFO     | mean y: 2276340.4968152866
[2025-07-14 22:25:40] 2025-07-15 02:25:05,701 | INFO     | -- intersect: 72056814287.46454
[2025-07-14 22:25:40] 2025-07-15 02:25:05,702 | INFO     | intersect: 72056814287.46454
[2025-07-14 22:25:40] 2025-07-15 02:25:05,702 | INFO     | chi2: 1.3624331614748708
[2025-07-14 22:25:40] 2025-07-15 02:25:05,702 | INFO     | current chi2=1.3624331614748708 (change=60.42988992306303 %)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,702 | INFO     | sum of square deviations: 1088928757.6776319
[2025-07-14 22:25:40] 2025-07-15 02:25:05,703 | INFO     | sum of deviations: -51186119535.50001
[2025-07-14 22:25:40] 2025-07-15 02:25:05,704 | INFO     | mean x: 1752541637.5460527
[2025-07-14 22:25:40] 2025-07-15 02:25:05,704 | INFO     | mean y: 2278746.5
[2025-07-14 22:25:40] 2025-07-15 02:25:05,704 | INFO     | -- intersect: 82382145306.0806
[2025-07-14 22:25:40] 2025-07-15 02:25:05,704 | INFO     | intersect: 82382145306.0806
[2025-07-14 22:25:40] 2025-07-15 02:25:05,704 | INFO     | chi2: 1.2645274124286696
[2025-07-14 22:25:40] 2025-07-15 02:25:05,705 | INFO     | current chi2=1.2645274124286696 (change=7.186095568916978 %)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,705 | INFO     | left removable region: 20
[2025-07-14 22:25:40] 2025-07-15 02:25:05,705 | INFO     | sum of square deviations: 779979861.6397029
[2025-07-14 22:25:40] 2025-07-15 02:25:05,706 | INFO     | sum of deviations: -25016769191.294136
[2025-07-14 22:25:40] 2025-07-15 02:25:05,706 | INFO     | mean x: 1752541759.5514705
[2025-07-14 22:25:40] 2025-07-15 02:25:05,706 | INFO     | mean y: 2276120.470588235
[2025-07-14 22:25:40] 2025-07-15 02:25:05,706 | INFO     | -- intersect: 56212615454.91877
[2025-07-14 22:25:40] 2025-07-15 02:25:05,706 | INFO     | intersect: 56212615454.91877
[2025-07-14 22:25:40] 2025-07-15 02:25:05,707 | INFO     | chi2: 0.31222822482296464
[2025-07-14 22:25:40] 2025-07-15 02:25:05,707 | INFO     | -- intersect: 56212615454.91877
[2025-07-14 22:25:40] 2025-07-15 02:25:05,707 | INFO     | current memory leak: -32.07 B/s (using 136 data points, chi2=0.31)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,708 | INFO     | could have reported an average CPU frequency of 2704 MHz (9 samples)
[2025-07-14 22:25:40] 2025-07-15 02:25:05,708 | INFO     | ..............................
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . Timing measurements:
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . get job = 0 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . initial setup = 3 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . payload setup = 8 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . stage-in = 0 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . payload execution = 9874 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . stage-out = 1 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | . log creation = 0 s
[2025-07-14 22:25:40] 2025-07-15 02:25:05,709 | INFO     | ..............................
[2025-07-14 22:25:40] 2025-07-15 02:25:06,334 | INFO     | 
[2025-07-14 22:25:40] 2025-07-15 02:25:06,337 | INFO     | job summary report
[2025-07-14 22:25:40] 2025-07-15 02:25:06,338 | INFO     | --------------------------------------------------
[2025-07-14 22:25:40] 2025-07-15 02:25:06,339 | INFO     | PanDA job id: 6720826257
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | task id: 45482137
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | errors: (none)
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | pilot state: finished 
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | transexitcode: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | exeerrorcode: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:06,340 | INFO     | exeerrordiag: 
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | exitcode: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | exitmsg: OK
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | cpuconsumptiontime: 52476 s
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | nevents: 400
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | neventsw: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | pid: 3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | pgrp: 3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | corecount: 8
[2025-07-14 22:25:40] 2025-07-15 02:25:06,341 | INFO     | event service: False
[2025-07-14 22:25:40] 2025-07-15 02:25:06,342 | INFO     | sizes: {0: 2393318, 1: 2393517, 9: 2393779, 11: 2393807, 9886: 2422254, 9889: 2431252, 9891: 2431436, 9901: 2431694}
[2025-07-14 22:25:40] 2025-07-15 02:25:06,342 | INFO     | --------------------------------------------------
[2025-07-14 22:25:40] 2025-07-15 02:25:06,342 | INFO     | 
[2025-07-14 22:25:40] 2025-07-15 02:25:06,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 22:25:40] 2025-07-15 02:25:06,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 22:25:40] 2025-07-15 02:25:06,375 | INFO     | job 6720826257 has completed (purged errors)
[2025-07-14 22:25:40] 2025-07-15 02:25:06,376 | INFO     | overall cleanup function is called
[2025-07-14 22:25:40] 2025-07-15 02:25:07,179 | INFO     | PID=3530656 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-14 22:25:40] 2025-07-15 02:25:07,179 | INFO     | .. there are 13 such processes running
[2025-07-14 22:25:40] 2025-07-15 02:25:07,386 | INFO     | --- collectZombieJob: --- 10, [3539317]
[2025-07-14 22:25:40] 2025-07-15 02:25:07,387 | INFO     | zombie collector waiting for pid 3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:07,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 22:25:40] 2025-07-15 02:25:07,387 | INFO     | collected zombie processes
[2025-07-14 22:25:40] 2025-07-15 02:25:07,387 | INFO     | will attempt to kill all subprocesses of pid=3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:07,821 | INFO     | process IDs to be killed: [3539317] (in reverse order)
[2025-07-14 22:25:40] 2025-07-15 02:25:07,962 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 22:25:40] 2025-07-15 02:25:07,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 22:25:40] 2025-07-15 02:25:07,983 | INFO     | did not find any defunct processes belonging to 3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:07,998 | INFO     | did not find any defunct processes belonging to 3539317
[2025-07-14 22:25:40] 2025-07-15 02:25:07,999 | INFO     | ready for new job
[2025-07-14 22:25:40] 2025-07-15 02:25:07,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 22:25:40] 2025-07-15 02:25:08,003 | INFO     | ***************************************
[2025-07-14 22:25:40] 2025-07-15 02:25:08,003 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 22:25:40] 2025-07-15 02:25:08,003 | INFO     | ***************************************
[2025-07-14 22:25:40] 2025-07-15 02:25:08,003 | INFO     | 
[2025-07-14 22:25:40] 2025-07-15 02:25:08,022 | INFO     | architecture information:
[2025-07-14 22:25:40] 2025-07-15 02:25:08,023 | INFO     | executing command: cat /etc/os-release
[2025-07-14 22:25:40] 2025-07-15 02:25:08,049 | INFO     | cat /etc/os-release:
[2025-07-14 22:25:40] NAME="CentOS Linux"
[2025-07-14 22:25:40] VERSION="7 (Core)"
[2025-07-14 22:25:40] ID="centos"
[2025-07-14 22:25:40] ID_LIKE="rhel fedora"
[2025-07-14 22:25:40] VERSION_ID="7"
[2025-07-14 22:25:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 22:25:40] ANSI_COLOR="0;31"
[2025-07-14 22:25:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 22:25:40] HOME_URL="https://www.centos.org/"
[2025-07-14 22:25:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 22:25:40] 
[2025-07-14 22:25:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 22:25:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 22:25:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 22:25:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 22:25:40] 
[2025-07-14 22:25:40] 2025-07-15 02:25:08,050 | INFO     | ***************************************
[2025-07-14 22:25:40] 2025-07-15 02:25:08,553 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 22:25:40] 2025-07-15 02:25:08,576 | INFO     | sufficient remaining disk space (76292292608 B)
[2025-07-14 22:25:40] 2025-07-15 02:25:08,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 22:25:40] 2025-07-15 02:25:08,577 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 22:25:40] 2025-07-15 02:25:08,577 | INFO     | update_server=False
[2025-07-14 22:25:40] 2025-07-15 02:25:08,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 22:25:40] 2025-07-15 02:25:08,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-14 22:25:40] 2025-07-15 02:25:08,854 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-14 22:25:40] 2025-07-15 02:25:08,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 22:25:40] 2025-07-15 02:25:08,855 | INFO     | will abort loop
[2025-07-14 22:25:40] 2025-07-15 02:25:08,980 | INFO     | all payload control threads have been joined
[2025-07-14 22:25:40] 2025-07-15 02:25:09,186 | INFO     | all job control threads have been joined
[2025-07-14 22:25:40] 2025-07-15 02:25:09,236 | INFO     | all data control threads have been joined
[2025-07-14 22:25:40] 2025-07-15 02:25:09,583 | INFO     | [job] retrieve thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:09,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 22:25:40] 2025-07-15 02:25:09,824 | INFO     | [payload] failed_post thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:09,861 | INFO     | [job] job monitor thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:09,987 | INFO     | [payload] control thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,093 | INFO     | [payload] validate_post thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,192 | INFO     | [job] control thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,204 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,242 | INFO     | [data] control thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,249 | INFO     | [job] validate thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,830 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,834 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,843 | INFO     | [data] copytool_in thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:10,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 22:25:40] 2025-07-15 02:25:10,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 22:25:40] 2025-07-15 02:25:11,690 | INFO     | [data] copytool_out thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:11,860 | INFO     | [job] queue monitor thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:14,994 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:19,323 | INFO     | job.realtimelogging is not enabled
[2025-07-14 22:25:40] 2025-07-15 02:25:20,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 22:25:40] 2025-07-15 02:25:22,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317939099456)>', '<ExcThread(monitor, started 140316715775744)>']
[2025-07-14 22:25:40] 2025-07-15 02:25:27,403 | INFO     | all workflow threads have been joined
[2025-07-14 22:25:40] 2025-07-15 02:25:27,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 22:25:40] 2025-07-15 02:25:27,404 | INFO     | traces error code: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:27,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 22:25:40] 2025-07-15 02:25:39,856 | INFO     | PID=3530656 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 22:25:40] 2025-07-15 02:25:39,857 | INFO     | .. there are 13 such processes running
[2025-07-14 22:25:40] 2025-07-15 02:25:39,858 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 22:25:40] 2025-07-15 02:25:39,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 22:25:40] 2025-07-15 02:25:39,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 22:25:40] 2025-07-15 02:25:39,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 22:25:40] 2025-07-15 02:25:39,858 | INFO     | [monitor] control thread has ended
[2025-07-14 22:25:40] 2025-07-15 02:25:40,125 [wrapper] ==== pilot stdout END ====
[2025-07-14 22:25:40] 2025-07-15 02:25:40,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 22:25:40] 2025-07-15 02:25:40,131 [wrapper] pilotpid: 3530656
[2025-07-14 22:25:40] 2025-07-15 02:25:40,139 [wrapper] Pilot exit status: 0
[2025-07-14 22:25:40] 2025-07-15 02:25:40,162 [wrapper] pandaids: 6720826257
[2025-07-14 22:25:40] 2025-07-15 02:25:40,243 [wrapper] cleanup supervisor_pilot 3957853 3530657
[2025-07-14 22:25:40] 2025-07-15 02:25:40,247 [wrapper] Test setup, not cleaning
[2025-07-14 22:25:40] 2025-07-15 02:25:40,251 [wrapper] apfmon messages muted
[2025-07-14 22:25:40] 2025-07-15 02:25:40,255 [wrapper] ==== wrapper stdout END ====
[2025-07-14 22:25:40] 2025-07-15 02:25:40,259 [wrapper] ==== wrapper stderr END ====
[2025-07-14 22:25:40]  *** Error codes and diagnostics ***
[2025-07-14 22:25:40]     "exeErrorCode": 0,
[2025-07-14 22:25:40]     "exeErrorDiag": "",
[2025-07-14 22:25:40]     "pilotErrorCode": 0,
[2025-07-14 22:25:40]     "pilotErrorDiag": "",
[2025-07-14 22:25:40]  *** Listing of results directory ***
[2025-07-14 22:25:40] total 573152
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 11:24 pilot3.tar.gz
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 11:27 queuedata.json
[2025-07-14 22:25:40] -rwx------. 1 boincer umatlas     36292 Jul  6 11:28 runpilot2-wrapper.sh
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas       100 Jul 14 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 22:25:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 19:39 run_atlas
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas       105 Jul 14 19:39 job.xml
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas 317889328 Jul 14 19:39 EVNT.45482135._000305.pool.root.1
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 19:39 start_atlas.sh
[2025-07-14 22:25:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 19:39 shared
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas    542880 Jul 14 19:39 input.tar.gz
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas         0 Jul 14 19:39 boinc_lockfile
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas      2542 Jul 14 19:39 pandaJob.out
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas    975669 Jul 14 19:39 agis_schedconf.cvmfs.json
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas   1588641 Jul 14 19:39 agis_ddmendpoints.agis.ALL.json
[2025-07-14 22:25:40] drwx------. 4 boincer umatlas      4096 Jul 14 19:39 pilot3
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas      6856 Jul 14 22:18 init_data.xml
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas 262715674 Jul 14 22:23 HITS.45482137._007615.pool.root.1
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas       530 Jul 14 22:24 boinc_task_state.xml
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas      1056 Jul 14 22:24 memory_monitor_summary.json
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas    351785 Jul 14 22:24 log.45482137._007615.job.log.tgz.1
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas        95 Jul 14 22:24 pilot_heartbeat.json
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas      7823 Jul 14 22:25 heartbeat.json
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas        27 Jul 14 22:25 wrapper_checkpoint.txt
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 22:25 boinc_mmap_file
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas       823 Jul 14 22:25 pilotlog.txt
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas    866210 Jul 14 22:25 log.45482137._007615.job.log.1
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas       357 Jul 14 22:25 output.list
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas       620 Jul 14 22:25 runtime_log
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas   1239040 Jul 14 22:25 result.tar.gz
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas      8665 Jul 14 22:25 runtime_log.err
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas       655 Jul 14 22:25 mrPLDmeTgs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQvCLDmH0fBqn.diag
[2025-07-14 22:25:40] -rw-r--r--. 1 boincer umatlas     21260 Jul 14 22:25 stderr.txt
[2025-07-14 22:25:40] HITS file was successfully produced:
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas 262715674 Jul 14 22:23 shared/HITS.pool.root.1
[2025-07-14 22:25:40]  *** Contents of shared directory: ***
[2025-07-14 22:25:40] total 568764
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas 317889328 Jul 14 19:39 ATLAS.root_0
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 19:39 start_atlas.sh
[2025-07-14 22:25:40] -rw-r--r--. 2 boincer umatlas    542880 Jul 14 19:39 input.tar.gz
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas 262715674 Jul 14 22:23 HITS.pool.root.1
[2025-07-14 22:25:40] -rw-------. 1 boincer umatlas   1239040 Jul 14 22:25 result.tar.gz
22:25:42 (3526571): run_atlas exited; CPU time 52837.434017
22:25:42 (3526571): called boinc_finish(0)

</stderr_txt>
]]>

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