Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:48 (1266485): wrapper (7.7.26015): starting
17:08:48 (1266485): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 17:08:48] Arguments: --nthreads 8
[2025-07-14 17:08:48] Threads: 8
[2025-07-14 17:08:48] Checking for CVMFS
[2025-07-14 17:08:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 17:08:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 17:08:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 17:08:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 17:08:49] 2.12.6.0 831533 164 88312 148329 0 58 19928372 32935936 15096 16776704 0 413946 99.984 5655 29149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-14 17:08:49] CVMFS is ok
[2025-07-14 17:08:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 17:08:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 17:08:49] Further information can be found at the LHC@home message board.
[2025-07-14 17:08:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 17:08:49] Checking for apptainer binary...
[2025-07-14 17:08:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 17:08:49] Running /usr/bin/apptainer --version
[2025-07-14 17:08:49] apptainer version 1.4.1-1.el9
[2025-07-14 17:08:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 17:08:49] c6-2-11-2.aglt2.org
[2025-07-14 17:08:49] apptainer works
[2025-07-14 17:08:49] Set ATHENA_PROC_NUMBER=8
[2025-07-14 17:08:49] Set ATHENA_CORE_NUMBER=8
[2025-07-14 17:08:49] Starting ATLAS job with PandaID=6720780917
[2025-07-14 17:08:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 21:41:00]  *** The last 200 lines of the pilot log: ***
[2025-07-14 21:41:00] 2025-07-15 01:40:23,557 | INFO     | monitor loop #1008: job 0:6720780917 is in state 'finished'
[2025-07-14 21:41:00] 2025-07-15 01:40:23,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,095 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-14 21:41:00] 2025-07-15 01:40:25,114 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2681.421427083334
[2025-07-14 21:41:00] 2025-07-15 01:40:25,132 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720780917/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,133 | INFO     | extracted standard info from prmon json
[2025-07-14 21:41:00] 2025-07-15 01:40:25,133 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 21:41:00] 2025-07-15 01:40:25,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 21:41:00] 2025-07-15 01:40:25,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 21:41:00] 2025-07-15 01:40:25,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 21:41:00] 2025-07-15 01:40:25,139 | INFO     | fitting pss+swap vs Time
[2025-07-14 21:41:00] 2025-07-15 01:40:25,139 | INFO     | sum of square deviations: 5770484749.358483
[2025-07-14 21:41:00] 2025-07-15 01:40:25,141 | INFO     | sum of deviations: 60018043400.396225
[2025-07-14 21:41:00] 2025-07-15 01:40:25,142 | INFO     | mean x: 1752535521.1698112
[2025-07-14 21:41:00] 2025-07-15 01:40:25,142 | INFO     | mean y: 2153283.124528302
[2025-07-14 21:41:00] 2025-07-15 01:40:25,142 | INFO     | -- intersect: -18225735280.656746
[2025-07-14 21:41:00] 2025-07-15 01:40:25,142 | INFO     | intersect: -18225735280.656746
[2025-07-14 21:41:00] 2025-07-15 01:40:25,142 | INFO     | chi2: 3.2944627103782267
[2025-07-14 21:41:00] 2025-07-15 01:40:25,143 | INFO     | sum of square deviations: 5449973973.553853
[2025-07-14 21:41:00] 2025-07-15 01:40:25,144 | INFO     | sum of deviations: 77671548200.6616
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | mean x: 1752535368.6692307
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | mean y: 2161589.0076923077
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | -- intersect: -24974496285.230385
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | intersect: -24974496285.230385
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | chi2: 2.6110500296386308
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | current chi2=2.6110500296386308 (change=20.744283387597836 %)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,145 | INFO     | right removable region: 259
[2025-07-14 21:41:00] 2025-07-15 01:40:25,146 | INFO     | sum of square deviations: 5449962689.211539
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | sum of deviations: 5680300597.1923065
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | mean x: 1752535673.6730769
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | mean y: 2179034.4846153846
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | -- intersect: -1824426027.1375966
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | intersect: -1824426027.1375966
[2025-07-14 21:41:00] 2025-07-15 01:40:25,148 | INFO     | chi2: 1.0077905506862397
[2025-07-14 21:41:00] 2025-07-15 01:40:25,149 | INFO     | current chi2=1.0077905506862397 (change=69.40956267279958 %)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,149 | INFO     | sum of square deviations: 5141533879.058807
[2025-07-14 21:41:00] 2025-07-15 01:40:25,151 | INFO     | sum of deviations: -7844037870.529411
[2025-07-14 21:41:00] 2025-07-15 01:40:25,151 | INFO     | mean x: 1752535826.1764705
[2025-07-14 21:41:00] 2025-07-15 01:40:25,151 | INFO     | mean y: 2185684.411764706
[2025-07-14 21:41:00] 2025-07-15 01:40:25,151 | INFO     | -- intersect: 2675893125.2940288
[2025-07-14 21:41:00] 2025-07-15 01:40:25,151 | INFO     | intersect: 2675893125.2940288
[2025-07-14 21:41:00] 2025-07-15 01:40:25,152 | INFO     | chi2: 0.8441942140262007
[2025-07-14 21:41:00] 2025-07-15 01:40:25,152 | INFO     | current chi2=0.8441942140262007 (change=16.233168345212263 %)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,152 | INFO     | left removable region: 20
[2025-07-14 21:41:00] 2025-07-15 01:40:25,152 | INFO     | sum of square deviations: 4233183851.96654
[2025-07-14 21:41:00] 2025-07-15 01:40:25,154 | INFO     | sum of deviations: 14298207258.953976
[2025-07-14 21:41:00] 2025-07-15 01:40:25,154 | INFO     | mean x: 1752535948.1715481
[2025-07-14 21:41:00] 2025-07-15 01:40:25,154 | INFO     | mean y: 2193486.6108786613
[2025-07-14 21:41:00] 2025-07-15 01:40:25,154 | INFO     | -- intersect: -5917257000.776618
[2025-07-14 21:41:00] 2025-07-15 01:40:25,154 | INFO     | intersect: -5917257000.776618
[2025-07-14 21:41:00] 2025-07-15 01:40:25,155 | INFO     | chi2: 0.13110243704630772
[2025-07-14 21:41:00] 2025-07-15 01:40:25,155 | INFO     | -- intersect: -5917257000.776618
[2025-07-14 21:41:00] 2025-07-15 01:40:25,155 | INFO     | current memory leak: 3.38 B/s (using 239 data points, chi2=0.13)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,156 | INFO     | could have reported an average CPU frequency of 2689 MHz (12 samples)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | ..............................
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . Timing measurements:
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . get job = 0 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . initial setup = 5 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . payload setup = 35 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . stage-in = 0 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . payload execution = 16141 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . stage-out = 4 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | . log creation = 0 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,157 | INFO     | ..............................
[2025-07-14 21:41:00] 2025-07-15 01:40:25,894 | INFO     | 
[2025-07-14 21:41:00] 2025-07-15 01:40:25,894 | INFO     | job summary report
[2025-07-14 21:41:00] 2025-07-15 01:40:25,894 | INFO     | --------------------------------------------------
[2025-07-14 21:41:00] 2025-07-15 01:40:25,894 | INFO     | PanDA job id: 6720780917
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | task id: 45482062
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | errors: (none)
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | pilot state: finished 
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | transexitcode: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | exeerrorcode: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | exeerrordiag: 
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | exitcode: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | exitmsg: OK
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | cpuconsumptiontime: 61061 s
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | nevents: 400
[2025-07-14 21:41:00] 2025-07-15 01:40:25,895 | INFO     | neventsw: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | pid: 1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | pgrp: 1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | corecount: 8
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | event service: False
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | sizes: {0: 2393250, 1: 2393505, 2: 2393505, 12: 2393533, 19: 2393823, 23: 2393851, 16182: 2425238, 16183: 2425237, 16188: 2434291, 16190: 2434347, 16215: 2434541}
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | --------------------------------------------------
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | 
[2025-07-14 21:41:00] 2025-07-15 01:40:25,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 21:41:00] 2025-07-15 01:40:26,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | job 6720780917 has completed (purged errors)
[2025-07-14 21:41:00] 2025-07-15 01:40:26,047 | INFO     | overall cleanup function is called
[2025-07-14 21:41:00] 2025-07-15 01:40:26,212 | INFO     | PID=1270644 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 21:41:00] 2025-07-15 01:40:26,212 | INFO     | .. there are 15 such processes running
[2025-07-14 21:41:00] 2025-07-15 01:40:27,059 | INFO     | --- collectZombieJob: --- 10, [1293526]
[2025-07-14 21:41:00] 2025-07-15 01:40:27,059 | INFO     | zombie collector waiting for pid 1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:27,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 21:41:00] 2025-07-15 01:40:27,060 | INFO     | collected zombie processes
[2025-07-14 21:41:00] 2025-07-15 01:40:27,060 | INFO     | will attempt to kill all subprocesses of pid=1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:28,007 | INFO     | process IDs to be killed: [1293526] (in reverse order)
[2025-07-14 21:41:00] 2025-07-15 01:40:28,206 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 21:41:00] 2025-07-15 01:40:28,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 21:41:00] 2025-07-15 01:40:28,277 | INFO     | did not find any defunct processes belonging to 1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:28,420 | INFO     | did not find any defunct processes belonging to 1293526
[2025-07-14 21:41:00] 2025-07-15 01:40:28,426 | INFO     | ready for new job
[2025-07-14 21:41:00] 2025-07-15 01:40:28,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 21:41:00] 2025-07-15 01:40:28,434 | INFO     | ***************************************
[2025-07-14 21:41:00] 2025-07-15 01:40:28,435 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 21:41:00] 2025-07-15 01:40:28,435 | INFO     | ***************************************
[2025-07-14 21:41:00] 2025-07-15 01:40:28,435 | INFO     | 
[2025-07-14 21:41:00] 2025-07-15 01:40:28,460 | INFO     | architecture information:
[2025-07-14 21:41:00] 2025-07-15 01:40:28,464 | INFO     | executing command: cat /etc/os-release
[2025-07-14 21:41:00] 2025-07-15 01:40:28,570 | INFO     | cat /etc/os-release:
[2025-07-14 21:41:00] NAME="CentOS Linux"
[2025-07-14 21:41:00] VERSION="7 (Core)"
[2025-07-14 21:41:00] ID="centos"
[2025-07-14 21:41:00] ID_LIKE="rhel fedora"
[2025-07-14 21:41:00] VERSION_ID="7"
[2025-07-14 21:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 21:41:00] ANSI_COLOR="0;31"
[2025-07-14 21:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 21:41:00] HOME_URL="https://www.centos.org/"
[2025-07-14 21:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 21:41:00] 
[2025-07-14 21:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 21:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 21:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 21:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 21:41:00] 
[2025-07-14 21:41:00] 2025-07-15 01:40:28,571 | INFO     | ***************************************
[2025-07-14 21:41:00] 2025-07-15 01:40:29,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 21:41:00] 2025-07-15 01:40:29,224 | INFO     | sufficient remaining disk space (94684315648 B)
[2025-07-14 21:41:00] 2025-07-15 01:40:29,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 21:41:00] 2025-07-15 01:40:29,225 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 21:41:00] 2025-07-15 01:40:29,225 | INFO     | update_server=False
[2025-07-14 21:41:00] 2025-07-15 01:40:29,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 21:41:00] 2025-07-15 01:40:29,320 | INFO     | all data control threads have been joined
[2025-07-14 21:41:00] 2025-07-15 01:40:29,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 21:41:00] 2025-07-15 01:40:29,615 | INFO     | aborting loop
[2025-07-14 21:41:00] 2025-07-15 01:40:29,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 21:41:00] 2025-07-15 01:40:29,725 | INFO     | all job control threads have been joined
[2025-07-14 21:41:00] 2025-07-15 01:40:29,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 21:41:00] 2025-07-15 01:40:30,231 | INFO     | [job] retrieve thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,326 | INFO     | [data] control thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 21:41:00] 2025-07-15 01:40:30,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,595 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,621 | INFO     | [job] job monitor thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,691 | INFO     | [payload] validate_post thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,731 | INFO     | [job] control thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,752 | INFO     | all payload control threads have been joined
[2025-07-14 21:41:00] 2025-07-15 01:40:30,970 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:30,990 | INFO     | [job] validate thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,385 | INFO     | [payload] failed_post thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,593 | INFO     | [job] queue monitor thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,639 | INFO     | [data] copytool_out thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,668 | INFO     | [data] copytool_in thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,669 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:31,759 | INFO     | [payload] control thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:33,793 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 21:41:00] 2025-07-15 01:40:35,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413521450816)>', '<ExcThread(monitor, started 140412815668992)>']
[2025-07-14 21:41:00] 2025-07-15 01:40:40,687 | INFO     | all workflow threads have been joined
[2025-07-14 21:41:00] 2025-07-15 01:40:40,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 21:41:00] 2025-07-15 01:40:40,687 | INFO     | traces error code: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:40,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 21:41:00] 2025-07-15 01:40:59,499 | INFO     | PID=1270644 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-14 21:41:00] 2025-07-15 01:40:59,499 | INFO     | .. there are 15 such processes running
[2025-07-14 21:41:00] 2025-07-15 01:40:59,500 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 21:41:00] 2025-07-15 01:40:59,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 21:41:00] 2025-07-15 01:40:59,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 21:41:00] 2025-07-15 01:40:59,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 21:41:00] 2025-07-15 01:40:59,504 | INFO     | [monitor] control thread has ended
[2025-07-14 21:41:00] 2025-07-15 01:40:59,733 [wrapper] ==== pilot stdout END ====
[2025-07-14 21:41:00] 2025-07-15 01:40:59,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 21:41:00] 2025-07-15 01:40:59,819 [wrapper] pilotpid: 1270644
[2025-07-14 21:41:00] 2025-07-15 01:40:59,831 [wrapper] Pilot exit status: 0
[2025-07-14 21:41:00] 2025-07-15 01:40:59,940 [wrapper] pandaids: 6720780917
[2025-07-14 21:41:00] 2025-07-15 01:41:00,066 [wrapper] cleanup supervisor_pilot 1810383 1270645
[2025-07-14 21:41:00] 2025-07-15 01:41:00,078 [wrapper] Test setup, not cleaning
[2025-07-14 21:41:00] 2025-07-15 01:41:00,092 [wrapper] apfmon messages muted
[2025-07-14 21:41:00] 2025-07-15 01:41:00,111 [wrapper] ==== wrapper stdout END ====
[2025-07-14 21:41:00] 2025-07-15 01:41:00,127 [wrapper] ==== wrapper stderr END ====
[2025-07-14 21:41:00]  *** Error codes and diagnostics ***
[2025-07-14 21:41:00]     "exeErrorCode": 0,
[2025-07-14 21:41:00]     "exeErrorDiag": "",
[2025-07-14 21:41:00]     "pilotErrorCode": 0,
[2025-07-14 21:41:00]     "pilotErrorDiag": "",
[2025-07-14 21:41:00]  *** Listing of results directory ***
[2025-07-14 21:41:00] total 576368
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 08:06 pilot3.tar.gz
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 08:10 queuedata.json
[2025-07-14 21:41:00] -rwx------. 1 boincer umatlas     36292 Jul  6 08:11 runpilot2-wrapper.sh
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas       100 Jul 14 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 21:41:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 14 17:08 run_atlas
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas       105 Jul 14 17:08 job.xml
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas 318909110 Jul 14 17:08 EVNT.45482060._000392.pool.root.1
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:08 start_atlas.sh
[2025-07-14 21:41:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 14 17:08 shared
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas    542886 Jul 14 17:08 input.tar.gz
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas         0 Jul 14 17:08 boinc_lockfile
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas      2531 Jul 14 17:08 pandaJob.out
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas    976445 Jul 14 17:09 agis_schedconf.cvmfs.json
[2025-07-14 21:41:00] drwx------. 4 boincer umatlas      4096 Jul 14 17:09 pilot3
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas      6854 Jul 14 21:36 init_data.xml
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas 263981219 Jul 14 21:38 HITS.45482062._009778.pool.root.1
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas       530 Jul 14 21:38 boinc_task_state.xml
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas      1040 Jul 14 21:39 memory_monitor_summary.json
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas   1588641 Jul 14 21:39 agis_ddmendpoints.agis.ALL.json
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas    397785 Jul 14 21:39 log.45482062._009778.job.log.tgz.1
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas        95 Jul 14 21:40 pilot_heartbeat.json
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas      7821 Jul 14 21:40 heartbeat.json
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas       823 Jul 14 21:40 pilotlog.txt
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas   1321801 Jul 14 21:41 log.45482062._009778.job.log.1
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 14 21:41 boinc_mmap_file
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas        28 Jul 14 21:41 wrapper_checkpoint.txt
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas       357 Jul 14 21:41 output.list
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas       620 Jul 14 21:41 runtime_log
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas   1740800 Jul 14 21:41 result.tar.gz
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas      8666 Jul 14 21:41 runtime_log.err
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas       657 Jul 14 21:41 JxtLDmCOds7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUpqKDmCXaWDn.diag
[2025-07-14 21:41:00] -rw-r--r--. 1 boincer umatlas     21355 Jul 14 21:41 stderr.txt
[2025-07-14 21:41:00] HITS file was successfully produced:
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas 263981219 Jul 14 21:38 shared/HITS.pool.root.1
[2025-07-14 21:41:00]  *** Contents of shared directory: ***
[2025-07-14 21:41:00] total 571488
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas 318909110 Jul 14 17:08 ATLAS.root_0
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 14 17:08 start_atlas.sh
[2025-07-14 21:41:00] -rw-r--r--. 2 boincer umatlas    542886 Jul 14 17:08 input.tar.gz
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas 263981219 Jul 14 21:38 HITS.pool.root.1
[2025-07-14 21:41:00] -rw-------. 1 boincer umatlas   1740800 Jul 14 21:41 result.tar.gz
21:41:02 (1266485): run_atlas exited; CPU time 61654.279018
21:41:02 (1266485): called boinc_finish(0)

</stderr_txt>
]]>

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