Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:25 (8086): wrapper (7.7.26015): starting
00:04:25 (8086): wrapper: running run_atlas (--nthreads 8)
[2025-07-14 00:04:25] Arguments: --nthreads 8
[2025-07-14 00:04:25] Threads: 8
[2025-07-14 00:04:25] Checking for CVMFS
[2025-07-14 00:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-14 00:04:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-14 00:04:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-14 00:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-14 00:04:26] 2.11.2.0 21125 151077 295756 148302 2 1 18397390 18432000 1 130560 0 256056880 98.688 729518050 40131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-14 00:04:26] CVMFS is ok
[2025-07-14 00:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-14 00:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-14 00:04:26] Further information can be found at the LHC@home message board.
[2025-07-14 00:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-14 00:04:26] Checking for apptainer binary...
[2025-07-14 00:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-14 00:04:26] Running /usr/bin/apptainer --version
[2025-07-14 00:04:26] apptainer version 1.3.2-1.el7
[2025-07-14 00:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-14 00:04:27] c-210-30.aglt2.org
[2025-07-14 00:04:27] apptainer works
[2025-07-14 00:04:27] Set ATHENA_PROC_NUMBER=8
[2025-07-14 00:04:27] Set ATHENA_CORE_NUMBER=8
[2025-07-14 00:04:27] Starting ATLAS job with PandaID=6721028372
[2025-07-14 00:04:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-14 01:28:39]  *** The last 200 lines of the pilot log: ***
[2025-07-14 01:28:39]  guid=33af9b82-de7d-4f74-8f47-15bddafdc0bc
[2025-07-14 01:28:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-14 01:28:39]  is_altstaged=None
[2025-07-14 01:28:39]  is_tar=False
[2025-07-14 01:28:39]  lfn=log.45482062._011327.job.log.tgz.1
[2025-07-14 01:28:39]  mtime=0
[2025-07-14 01:28:39]  protocol_id=None
[2025-07-14 01:28:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-14 01:28:39]  replicas=None
[2025-07-14 01:28:39]  scope=mc23_13p6TeV
[2025-07-14 01:28:39]  status=None
[2025-07-14 01:28:39]  status_code=0
[2025-07-14 01:28:39]  storage_token=
[2025-07-14 01:28:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6721028372/log.45482062._011327.job.log.tgz.1
[2025-07-14 01:28:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/09/log.45482062._011327.job.log.tgz.1
[2025-07-14 01:28:39]  workdir=None
[2025-07-14 01:28:39] ]
[2025-07-14 01:28:39] 2025-07-14 05:28:01,667 | INFO     | transferring file log.45482062._011327.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6721028372/log.45482062._011327.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-14 01:28:39] 2025-07-14 05:28:01,667 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6721028372/log.45482062._011327.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482062._011327.job
[2025-07-14 01:28:39] 2025-07-14 05:28:01,685 | INFO     | adding to output.list: log.45482062._011327.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/09/log.45482062._011327.job.log.tg
[2025-07-14 01:28:39] 2025-07-14 05:28:01,687 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-14 01:28:39] 2025-07-14 05:28:01,687 | INFO     | summary of transferred files:
[2025-07-14 01:28:39] 2025-07-14 05:28:01,687 | INFO     |  -- lfn=log.45482062._011327.job.log.tgz.1, status_code=0, status=transferred
[2025-07-14 01:28:39] 2025-07-14 05:28:01,687 | INFO     | stage-out finished correctly
[2025-07-14 01:28:39] 2025-07-14 05:28:02,516 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-14 01:28:39] 2025-07-14 05:28:03,138 | INFO     | job 6721028372 has state=finished
[2025-07-14 01:28:39] 2025-07-14 05:28:03,138 | INFO     | preparing for final server update for job 6721028372 in state='finished'
[2025-07-14 01:28:39] 2025-07-14 05:28:03,139 | INFO     | this job has now completed (state=finished)
[2025-07-14 01:28:39] 2025-07-14 05:28:03,139 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-14 01:28:39] 2025-07-14 05:28:03,139 | INFO     | log transfer has been attempted: DONE
[2025-07-14 01:28:39] 2025-07-14 05:28:03,139 | INFO     | job 6721028372 has finished - writing final server update
[2025-07-14 01:28:39] 2025-07-14 05:28:03,140 | INFO     | total number of processed events: 400 (read)
[2025-07-14 01:28:39] 2025-07-14 05:28:03,141 | INFO     | executing command: lscpu
[2025-07-14 01:28:39] 2025-07-14 05:28:03,177 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-14 01:28:39] 2025-07-14 05:28:06,005 | WARNING  | process 19240 can no longer be monitored (due to stat problems) - aborting
[2025-07-14 01:28:39] 2025-07-14 05:28:06,006 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721028372/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 01:28:39] 2025-07-14 05:28:06,093 | INFO     | number of running child processes to parent process 19240: 1
[2025-07-14 01:28:39] 2025-07-14 05:28:06,093 | INFO     | maximum number of monitored processes: 6
[2025-07-14 01:28:39] 2025-07-14 05:28:07,501 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-14 01:28:39] 2025-07-14 05:28:07,505 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 1639.716175
[2025-07-14 01:28:39] 2025-07-14 05:28:07,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721028372/memory_monitor_summary.json (trf name=prmon)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,508 | INFO     | extracted standard info from prmon json
[2025-07-14 01:28:39] 2025-07-14 05:28:07,508 | INFO     | extracted standard memory fields from prmon json
[2025-07-14 01:28:39] 2025-07-14 05:28:07,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-14 01:28:39] 2025-07-14 05:28:07,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-14 01:28:39] 2025-07-14 05:28:07,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | fitting pss+swap vs Time
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | sum of square deviations: 130793150.0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | sum of deviations: 684072056.0000001
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | mean x: 1752468473.0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | mean y: 2563540.3066666666
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | -- intersect: -9163166556.41698
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | intersect: -9163166556.41698
[2025-07-14 01:28:39] 2025-07-14 05:28:07,510 | INFO     | chi2: 0.0016760788070201925
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | -- intersect: -9163166556.41698
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | current memory leak: 5.23 B/s (using 75 data points, chi2=0.00)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | could have reported an average CPU frequency of 1735 MHz (6 samples)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | ..............................
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . Timing measurements:
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . get job = 0 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . initial setup = 2 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . payload setup = 9 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . stage-in = 0 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . payload execution = 4970 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . stage-out = 0 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | . log creation = 0 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,511 | INFO     | ..............................
[2025-07-14 01:28:39] 2025-07-14 05:28:07,574 | INFO     | 
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | job summary report
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | --------------------------------------------------
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | PanDA job id: 6721028372
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | task id: 45482062
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | errors: (none)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | pilot state: finished 
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | transexitcode: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,575 | INFO     | exeerrorcode: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | exeerrordiag: 
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | exitcode: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | exitmsg: OK
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | cpuconsumptiontime: 37669 s
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | nevents: 400
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | neventsw: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | pid: 19240
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | pgrp: 19240
[2025-07-14 01:28:39] 2025-07-14 05:28:07,576 | INFO     | corecount: 8
[2025-07-14 01:28:39] 2025-07-14 05:28:07,577 | INFO     | event service: False
[2025-07-14 01:28:39] 2025-07-14 05:28:07,577 | INFO     | sizes: {0: 2393442, 5: 2393704, 11: 2393760, 4983: 2420042, 4984: 2429040, 4985: 2429096, 4990: 2429418}
[2025-07-14 01:28:39] 2025-07-14 05:28:07,577 | INFO     | --------------------------------------------------
[2025-07-14 01:28:39] 2025-07-14 05:28:07,577 | INFO     | 
[2025-07-14 01:28:39] 2025-07-14 05:28:07,577 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-14 01:28:39] 2025-07-14 05:28:07,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,598 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-14 01:28:39] 2025-07-14 05:28:07,600 | INFO     | job 6721028372 has completed (purged errors)
[2025-07-14 01:28:39] 2025-07-14 05:28:07,601 | INFO     | overall cleanup function is called
[2025-07-14 01:28:39] 2025-07-14 05:28:08,609 | INFO     | --- collectZombieJob: --- 10, [19240]
[2025-07-14 01:28:39] 2025-07-14 05:28:08,609 | INFO     | zombie collector waiting for pid 19240
[2025-07-14 01:28:39] 2025-07-14 05:28:08,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-14 01:28:39] 2025-07-14 05:28:08,609 | INFO     | collected zombie processes
[2025-07-14 01:28:39] 2025-07-14 05:28:08,609 | INFO     | will attempt to kill all subprocesses of pid=19240
[2025-07-14 01:28:39] 2025-07-14 05:28:08,720 | INFO     | process IDs to be killed: [19240] (in reverse order)
[2025-07-14 01:28:39] 2025-07-14 05:28:08,776 | WARNING  | found no corresponding commands to process id(s)
[2025-07-14 01:28:39] 2025-07-14 05:28:08,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-14 01:28:39] 2025-07-14 05:28:08,780 | INFO     | did not find any defunct processes belonging to 19240
[2025-07-14 01:28:39] 2025-07-14 05:28:08,784 | INFO     | did not find any defunct processes belonging to 19240
[2025-07-14 01:28:39] 2025-07-14 05:28:08,784 | INFO     | ready for new job
[2025-07-14 01:28:39] 2025-07-14 05:28:08,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-14 01:28:39] 2025-07-14 05:28:08,786 | INFO     | ***************************************
[2025-07-14 01:28:39] 2025-07-14 05:28:08,786 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-14 01:28:39] 2025-07-14 05:28:08,786 | INFO     | ***************************************
[2025-07-14 01:28:39] 2025-07-14 05:28:08,786 | INFO     | 
[2025-07-14 01:28:39] 2025-07-14 05:28:08,788 | INFO     | architecture information:
[2025-07-14 01:28:39] 2025-07-14 05:28:08,789 | INFO     | executing command: cat /etc/os-release
[2025-07-14 01:28:39] 2025-07-14 05:28:08,802 | INFO     | cat /etc/os-release:
[2025-07-14 01:28:39] NAME="CentOS Linux"
[2025-07-14 01:28:39] VERSION="7 (Core)"
[2025-07-14 01:28:39] ID="centos"
[2025-07-14 01:28:39] ID_LIKE="rhel fedora"
[2025-07-14 01:28:39] VERSION_ID="7"
[2025-07-14 01:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-14 01:28:39] ANSI_COLOR="0;31"
[2025-07-14 01:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-14 01:28:39] HOME_URL="https://www.centos.org/"
[2025-07-14 01:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-14 01:28:39] 
[2025-07-14 01:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-14 01:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-14 01:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-14 01:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-14 01:28:39] 
[2025-07-14 01:28:39] 2025-07-14 05:28:08,802 | INFO     | ***************************************
[2025-07-14 01:28:39] 2025-07-14 05:28:09,305 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-14 01:28:39] 2025-07-14 05:28:09,322 | INFO     | sufficient remaining disk space (57306775552 B)
[2025-07-14 01:28:39] 2025-07-14 05:28:09,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-14 01:28:39] 2025-07-14 05:28:09,323 | INFO     | current server update state: UPDATING_FINAL
[2025-07-14 01:28:39] 2025-07-14 05:28:09,323 | INFO     | update_server=False
[2025-07-14 01:28:39] 2025-07-14 05:28:09,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-14 01:28:39] 2025-07-14 05:28:09,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-14 01:28:39] 2025-07-14 05:28:09,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-14 01:28:39] 2025-07-14 05:28:09,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-14 01:28:39] 2025-07-14 05:28:09,602 | INFO     | aborting loop
[2025-07-14 01:28:39] 2025-07-14 05:28:09,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-14 01:28:39] 2025-07-14 05:28:10,138 | INFO     | all data control threads have been joined
[2025-07-14 01:28:39] 2025-07-14 05:28:10,329 | INFO     | [job] retrieve thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:10,329 | INFO     | [job] queue monitor thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:10,384 | INFO     | [payload] validate_pre thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:10,607 | INFO     | [job] job monitor thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:10,624 | INFO     | [data] copytool_in thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:10,798 | INFO     | all payload control threads have been joined
[2025-07-14 01:28:39] 2025-07-14 05:28:10,854 | INFO     | all job control threads have been joined
[2025-07-14 01:28:39] 2025-07-14 05:28:10,892 | INFO     | [payload] failed_post thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,143 | INFO     | [data] control thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,518 | INFO     | [payload] validate_post thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,639 | INFO     | [job] create_data_payload thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,659 | INFO     | [job] validate thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,786 | INFO     | [payload] execute_payloads thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,795 | INFO     | [data] copytool_out thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,803 | INFO     | [payload] control thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:11,859 | INFO     | [job] control thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:13,330 | INFO     | [data] queue_monitor thread has finished
[2025-07-14 01:28:39] 2025-07-14 05:28:13,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256469833536)>', '<ExcThread(monitor, started 140255915144960)>']
[2025-07-14 01:28:39] 2025-07-14 05:28:18,610 | INFO     | all workflow threads have been joined
[2025-07-14 01:28:39] 2025-07-14 05:28:18,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-14 01:28:39] 2025-07-14 05:28:18,610 | INFO     | traces error code: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:18,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | INFO     | PID=12083 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | INFO     | found 0 job(s) in 20 queues
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-14 01:28:39] 2025-07-14 05:28:38,891 | INFO     | [monitor] control thread has ended
[2025-07-14 01:28:39] 2025-07-14 05:28:38,981 [wrapper] ==== pilot stdout END ====
[2025-07-14 01:28:39] 2025-07-14 05:28:38,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-14 01:28:39] 2025-07-14 05:28:38,989 [wrapper] pilotpid: 12083
[2025-07-14 01:28:39] 2025-07-14 05:28:38,993 [wrapper] Pilot exit status: 0
[2025-07-14 01:28:39] 2025-07-14 05:28:39,007 [wrapper] pandaids: 6721028372
[2025-07-14 01:28:39] 2025-07-14 05:28:39,053 [wrapper] cleanup supervisor_pilot  1224 12084
[2025-07-14 01:28:39] 2025-07-14 05:28:39,057 [wrapper] Test setup, not cleaning
[2025-07-14 01:28:39] 2025-07-14 05:28:39,061 [wrapper] apfmon messages muted
[2025-07-14 01:28:39] 2025-07-14 05:28:39,064 [wrapper] ==== wrapper stdout END ====
[2025-07-14 01:28:39] 2025-07-14 05:28:39,068 [wrapper] ==== wrapper stderr END ====
[2025-07-14 01:28:39]  *** Error codes and diagnostics ***
[2025-07-14 01:28:39]     "exeErrorCode": 0,
[2025-07-14 01:28:39]     "exeErrorDiag": "",
[2025-07-14 01:28:39]     "pilotErrorCode": 0,
[2025-07-14 01:28:39]     "pilotErrorDiag": "",
[2025-07-14 01:28:39]  *** Listing of results directory ***
[2025-07-14 01:28:39] total 582524
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas    530466 Jul  6 17:19 pilot3.tar.gz
[2025-07-14 01:28:39] -rwx------ 1 boincer umatlas     36292 Jul  6 17:27 runpilot2-wrapper.sh
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas      5112 Jul  6 17:27 queuedata.json
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas       100 Jul 14 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-14 01:28:39] -rwxr-xr-x 1 boincer umatlas      7986 Jul 14 00:04 run_atlas
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas       105 Jul 14 00:04 job.xml
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas 321115971 Jul 14 00:04 EVNT.45482060._000453.pool.root.1
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 14 00:04 start_atlas.sh
[2025-07-14 01:28:39] drwxrwx--x 2 boincer umatlas      4096 Jul 14 00:04 shared
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas    542881 Jul 14 00:04 input.tar.gz
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas         0 Jul 14 00:04 boinc_lockfile
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas      2533 Jul 14 00:04 pandaJob.out
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas    976227 Jul 14 00:04 agis_schedconf.cvmfs.json
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas   1588641 Jul 14 00:04 agis_ddmendpoints.agis.ALL.json
[2025-07-14 01:28:39] drwx------ 4 boincer umatlas      4096 Jul 14 00:04 pilot3
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas      6226 Jul 14 01:27 init_data.xml
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas 269926000 Jul 14 01:27 HITS.45482062._011327.pool.root.1
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas       529 Jul 14 01:27 boinc_task_state.xml
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas      1042 Jul 14 01:27 memory_monitor_summary.json
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas    320554 Jul 14 01:28 log.45482062._011327.job.log.tgz.1
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas      7832 Jul 14 01:28 heartbeat.json
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas      8192 Jul 14 01:28 boinc_mmap_file
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas        27 Jul 14 01:28 wrapper_checkpoint.txt
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas        95 Jul 14 01:28 pilot_heartbeat.json
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas       745 Jul 14 01:28 pilotlog.txt
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas    478259 Jul 14 01:28 log.45482062._011327.job.log.1
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas       357 Jul 14 01:28 output.list
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas       620 Jul 14 01:28 runtime_log
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas    819200 Jul 14 01:28 result.tar.gz
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas      8660 Jul 14 01:28 runtime_log.err
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas       658 Jul 14 01:28 PpELDm84ls7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqMDLDmHpg6Qn.diag
[2025-07-14 01:28:39] -rw-r--r-- 1 boincer umatlas     21388 Jul 14 01:28 stderr.txt
[2025-07-14 01:28:39] HITS file was successfully produced:
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas 269926000 Jul 14 01:27 shared/HITS.pool.root.1
[2025-07-14 01:28:39]  *** Contents of shared directory: ***
[2025-07-14 01:28:39] total 578544
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas 321115971 Jul 14 00:04 ATLAS.root_0
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 14 00:04 start_atlas.sh
[2025-07-14 01:28:39] -rw-r--r-- 2 boincer umatlas    542881 Jul 14 00:04 input.tar.gz
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas 269926000 Jul 14 01:27 HITS.pool.root.1
[2025-07-14 01:28:39] -rw------- 1 boincer umatlas    819200 Jul 14 01:28 result.tar.gz
01:28:40 (8086): run_atlas exited; CPU time 37475.627055
01:28:40 (8086): called boinc_finish(0)

</stderr_txt>
]]>

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