Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:23:30 (714180): wrapper (7.7.26015): starting
11:23:30 (714180): wrapper: running run_atlas (--nthreads 8)
[2025-07-13 11:23:30] Arguments: --nthreads 8
[2025-07-13 11:23:30] Threads: 8
[2025-07-13 11:23:30] Checking for CVMFS
[2025-07-13 11:23:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-13 11:23:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-13 11:23:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-13 11:23:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-13 11:23:30] 2.13.0.0 517523 170 34644 148284 0 1 24391749 32935936 0 16776704 0 62 94.030 5191 58988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-13 11:23:30] CVMFS is ok
[2025-07-13 11:23:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-13 11:23:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-13 11:23:30] Further information can be found at the LHC@home message board.
[2025-07-13 11:23:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-13 11:23:30] Checking for apptainer binary...
[2025-07-13 11:23:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-13 11:23:30] Running /usr/bin/apptainer --version
[2025-07-13 11:23:30] apptainer version 1.4.1-1.el9
[2025-07-13 11:23:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-13 11:23:30] c6-8-25-4.aglt2.org
[2025-07-13 11:23:30] apptainer works
[2025-07-13 11:23:30] Set ATHENA_PROC_NUMBER=8
[2025-07-13 11:23:30] Set ATHENA_CORE_NUMBER=8
[2025-07-13 11:23:30] Starting ATLAS job with PandaID=6720607219
[2025-07-13 11:23:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-13 12:34:42]  *** The last 200 lines of the pilot log: ***
[2025-07-13 12:34:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-13 12:34:42]  is_altstaged=None
[2025-07-13 12:34:42]  is_tar=False
[2025-07-13 12:34:42]  lfn=log.45482040._002479.job.log.tgz.1
[2025-07-13 12:34:42]  mtime=0
[2025-07-13 12:34:42]  protocol_id=None
[2025-07-13 12:34:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-13 12:34:42]  replicas=None
[2025-07-13 12:34:42]  scope=mc23_13p6TeV
[2025-07-13 12:34:42]  status=None
[2025-07-13 12:34:42]  status_code=0
[2025-07-13 12:34:42]  storage_token=
[2025-07-13 12:34:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6720607219/log.45482040._002479.job.log.tgz.1
[2025-07-13 12:34:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/0b/log.45482040._002479.job.log.tgz.1
[2025-07-13 12:34:42]  workdir=None
[2025-07-13 12:34:42] ]
[2025-07-13 12:34:42] 2025-07-13 16:34:20,636 | INFO     | transferring file log.45482040._002479.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6720607219/log.45482040._002479.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-13 12:34:42] 2025-07-13 16:34:20,636 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6720607219/log.45482040._002479.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482040._002479.job
[2025-07-13 12:34:42] 2025-07-13 16:34:20,644 | INFO     | adding to output.list: log.45482040._002479.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/0b/log.45482040._002479.job.log.tg
[2025-07-13 12:34:42] 2025-07-13 16:34:20,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-13 12:34:42] 2025-07-13 16:34:20,645 | INFO     | summary of transferred files:
[2025-07-13 12:34:42] 2025-07-13 16:34:20,645 | INFO     |  -- lfn=log.45482040._002479.job.log.tgz.1, status_code=0, status=transferred
[2025-07-13 12:34:42] 2025-07-13 16:34:20,645 | INFO     | stage-out finished correctly
[2025-07-13 12:34:42] 2025-07-13 16:34:20,822 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-13 12:34:42] 2025-07-13 16:34:21,088 | INFO     | job 6720607219 has state=finished
[2025-07-13 12:34:42] 2025-07-13 16:34:21,088 | INFO     | preparing for final server update for job 6720607219 in state='finished'
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | this job has now completed (state=finished)
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | log transfer has been attempted: DONE
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | job 6720607219 has finished - writing final server update
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | total number of processed events: 400 (read)
[2025-07-13 12:34:42] 2025-07-13 16:34:21,089 | INFO     | executing command: lscpu
[2025-07-13 12:34:42] 2025-07-13 16:34:21,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-13 12:34:42] 2025-07-13 16:34:22,440 | INFO     | monitor loop #324: job 0:6720607219 is in state 'finished'
[2025-07-13 12:34:42] 2025-07-13 16:34:22,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-13 12:34:42] 2025-07-13 16:34:22,942 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-13 12:34:42] 2025-07-13 16:34:22,960 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3990.4177395833335
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720607219/memory_monitor_summary.json (trf name=prmon)
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | INFO     | extracted standard info from prmon json
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | INFO     | extracted standard memory fields from prmon json
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-13 12:34:42] 2025-07-13 16:34:22,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-13 12:34:42] 2025-07-13 16:34:22,969 | INFO     | fitting pss+swap vs Time
[2025-07-13 12:34:42] 2025-07-13 16:34:22,969 | INFO     | sum of square deviations: 77515872.0
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | sum of deviations: -11420730245.999998
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | mean x: 1752422432.0
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | mean y: 2529768.4603174604
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | -- intersect: 258194089206.91022
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | intersect: 258194089206.91022
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | chi2: 0.13466653150686664
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | -- intersect: 258194089206.91022
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | current memory leak: -147.33 B/s (using 63 data points, chi2=0.13)
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | could have reported an average CPU frequency of 3961 MHz (6 samples)
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | ..............................
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | . Timing measurements:
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | . get job = 0 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | . initial setup = 2 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | . payload setup = 3 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,970 | INFO     | . stage-in = 0 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,971 | INFO     | . payload execution = 4223 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,971 | INFO     | . stage-out = 0 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,971 | INFO     | . log creation = 0 s
[2025-07-13 12:34:42] 2025-07-13 16:34:22,971 | INFO     | ..............................
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | 
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | job summary report
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | --------------------------------------------------
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | PanDA job id: 6720607219
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | task id: 45482040
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | errors: (none)
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-13 12:34:42] 2025-07-13 16:34:23,015 | INFO     | pilot state: finished 
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | transexitcode: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | exeerrorcode: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | exeerrordiag: 
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | exitcode: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | exitmsg: OK
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | cpuconsumptiontime: 31582 s
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | nevents: 400
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | neventsw: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | pid: 724311
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | pgrp: 724311
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | corecount: 8
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | event service: False
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | sizes: {0: 2393221, 1: 2393476, 3: 2393738, 11: 2393766, 4230: 2419883, 4231: 2429065, 4233: 2429203}
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | --------------------------------------------------
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | 
[2025-07-13 12:34:42] 2025-07-13 16:34:23,016 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-13 12:34:42] 2025-07-13 16:34:23,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | job 6720607219 has completed (purged errors)
[2025-07-13 12:34:42] 2025-07-13 16:34:23,026 | INFO     | overall cleanup function is called
[2025-07-13 12:34:42] 2025-07-13 16:34:24,033 | INFO     | --- collectZombieJob: --- 10, [724311]
[2025-07-13 12:34:42] 2025-07-13 16:34:24,033 | INFO     | zombie collector waiting for pid 724311
[2025-07-13 12:34:42] 2025-07-13 16:34:24,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-13 12:34:42] 2025-07-13 16:34:24,033 | INFO     | collected zombie processes
[2025-07-13 12:34:42] 2025-07-13 16:34:24,033 | INFO     | will attempt to kill all subprocesses of pid=724311
[2025-07-13 12:34:42] 2025-07-13 16:34:24,164 | INFO     | process IDs to be killed: [724311] (in reverse order)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,200 | WARNING  | found no corresponding commands to process id(s)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-13 12:34:42] 2025-07-13 16:34:24,205 | INFO     | did not find any defunct processes belonging to 724311
[2025-07-13 12:34:42] 2025-07-13 16:34:24,209 | INFO     | did not find any defunct processes belonging to 724311
[2025-07-13 12:34:42] 2025-07-13 16:34:24,209 | INFO     | ready for new job
[2025-07-13 12:34:42] 2025-07-13 16:34:24,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-13 12:34:42] 2025-07-13 16:34:24,209 | INFO     | ***************************************
[2025-07-13 12:34:42] 2025-07-13 16:34:24,210 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-13 12:34:42] 2025-07-13 16:34:24,210 | INFO     | ***************************************
[2025-07-13 12:34:42] 2025-07-13 16:34:24,210 | INFO     | 
[2025-07-13 12:34:42] 2025-07-13 16:34:24,225 | INFO     | architecture information:
[2025-07-13 12:34:42] 2025-07-13 16:34:24,225 | INFO     | executing command: cat /etc/os-release
[2025-07-13 12:34:42] 2025-07-13 16:34:24,230 | INFO     | cat /etc/os-release:
[2025-07-13 12:34:42] NAME="CentOS Linux"
[2025-07-13 12:34:42] VERSION="7 (Core)"
[2025-07-13 12:34:42] ID="centos"
[2025-07-13 12:34:42] ID_LIKE="rhel fedora"
[2025-07-13 12:34:42] VERSION_ID="7"
[2025-07-13 12:34:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-13 12:34:42] ANSI_COLOR="0;31"
[2025-07-13 12:34:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-13 12:34:42] HOME_URL="https://www.centos.org/"
[2025-07-13 12:34:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-13 12:34:42] 
[2025-07-13 12:34:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-13 12:34:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-13 12:34:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-13 12:34:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-13 12:34:42] 
[2025-07-13 12:34:42] 2025-07-13 16:34:24,230 | INFO     | ***************************************
[2025-07-13 12:34:42] 2025-07-13 16:34:24,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-13 12:34:42] 2025-07-13 16:34:24,738 | INFO     | sufficient remaining disk space (76288098304 B)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-13 12:34:42] 2025-07-13 16:34:24,738 | INFO     | current server update state: UPDATING_FINAL
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | INFO     | update_server=False
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | INFO     | found 0 job(s) in 20 queues
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-13 12:34:42] 2025-07-13 16:34:24,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-13 12:34:42] 2025-07-13 16:34:24,758 | INFO     | all data control threads have been joined
[2025-07-13 12:34:42] 2025-07-13 16:34:24,944 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-13 12:34:42] 2025-07-13 16:34:24,944 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-13 12:34:42] 2025-07-13 16:34:24,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-13 12:34:42] 2025-07-13 16:34:24,944 | INFO     | will abort loop
[2025-07-13 12:34:42] 2025-07-13 16:34:24,996 | INFO     | all payload control threads have been joined
[2025-07-13 12:34:42] 2025-07-13 16:34:25,744 | INFO     | [job] retrieve thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:25,744 | INFO     | [job] queue monitor thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:25,763 | INFO     | [data] control thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:25,871 | INFO     | [payload] failed_post thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:25,934 | INFO     | all job control threads have been joined
[2025-07-13 12:34:42] 2025-07-13 16:34:25,949 | INFO     | [job] job monitor thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,001 | INFO     | [payload] control thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,072 | INFO     | [job] validate thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-13 12:34:42] 2025-07-13 16:34:26,302 | INFO     | [job] create_data_payload thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,332 | INFO     | [payload] validate_pre thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,403 | INFO     | [payload] execute_payloads thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,847 | INFO     | [payload] validate_post thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-13 12:34:42] 2025-07-13 16:34:26,939 | INFO     | [job] control thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:26,944 | INFO     | [data] copytool_in thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:28,199 | INFO     | [data] copytool_out thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:30,873 | INFO     | [data] queue_monitor thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:34,803 | INFO     | job.realtimelogging is not enabled
[2025-07-13 12:34:42] 2025-07-13 16:34:35,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-13 12:34:42] 2025-07-13 16:34:37,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676094195520)>', '<ExcThread(monitor, started 140675462977280)>']
[2025-07-13 12:34:42] 2025-07-13 16:34:38,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-13 12:34:42] 2025-07-13 16:34:38,810 | INFO     | [monitor] control thread has ended
[2025-07-13 12:34:42] 2025-07-13 16:34:42,866 | INFO     | all workflow threads have been joined
[2025-07-13 12:34:42] 2025-07-13 16:34:42,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-13 12:34:42] 2025-07-13 16:34:42,866 | INFO     | traces error code: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:42,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-13 12:34:42] 2025-07-13 16:34:42,926 [wrapper] ==== pilot stdout END ====
[2025-07-13 12:34:42] 2025-07-13 16:34:42,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-13 12:34:42] 2025-07-13 16:34:42,929 [wrapper] pilotpid: 717803
[2025-07-13 12:34:42] 2025-07-13 16:34:42,930 [wrapper] Pilot exit status: 0
[2025-07-13 12:34:42] 2025-07-13 16:34:42,935 [wrapper] pandaids: 6720607219
[2025-07-13 12:34:42] 2025-07-13 16:34:42,964 [wrapper] cleanup supervisor_pilot  802560 717804
[2025-07-13 12:34:42] 2025-07-13 16:34:42,965 [wrapper] Test setup, not cleaning
[2025-07-13 12:34:42] 2025-07-13 16:34:42,966 [wrapper] apfmon messages muted
[2025-07-13 12:34:42] 2025-07-13 16:34:42,968 [wrapper] ==== wrapper stdout END ====
[2025-07-13 12:34:42] 2025-07-13 16:34:42,969 [wrapper] ==== wrapper stderr END ====
[2025-07-13 12:34:42]  *** Error codes and diagnostics ***
[2025-07-13 12:34:42]     "exeErrorCode": 0,
[2025-07-13 12:34:42]     "exeErrorDiag": "",
[2025-07-13 12:34:42]     "pilotErrorCode": 0,
[2025-07-13 12:34:42]     "pilotErrorDiag": "",
[2025-07-13 12:34:42]  *** Listing of results directory ***
[2025-07-13 12:34:43] total 579152
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas    530466 Jul  5 00:20 pilot3.tar.gz
[2025-07-13 12:34:43] -rwx------. 1 boincer umatlas     36292 Jul  5 01:16 runpilot2-wrapper.sh
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas      5112 Jul  5 01:16 queuedata.json
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas       100 Jul 13 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-13 12:34:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 13 11:23 run_atlas
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas       105 Jul 13 11:23 job.xml
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas 316344722 Jul 13 11:23 EVNT.45482038._000100.pool.root.1
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 11:23 start_atlas.sh
[2025-07-13 12:34:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 13 11:23 shared
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas    542885 Jul 13 11:23 input.tar.gz
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas         0 Jul 13 11:23 boinc_lockfile
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas      2542 Jul 13 11:23 pandaJob.out
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas    976211 Jul 13 11:23 agis_schedconf.cvmfs.json
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas   1588641 Jul 13 11:23 agis_ddmendpoints.agis.ALL.json
[2025-07-13 12:34:43] drwx------. 4 boincer umatlas      4096 Jul 13 11:23 pilot3
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas      6858 Jul 13 12:31 init_data.xml
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas 271418309 Jul 13 12:33 HITS.45482040._002479.pool.root.1
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas       529 Jul 13 12:33 boinc_task_state.xml
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas      1027 Jul 13 12:34 memory_monitor_summary.json
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas    289787 Jul 13 12:34 log.45482040._002479.job.log.tgz.1
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas        27 Jul 13 12:34 wrapper_checkpoint.txt
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 13 12:34 boinc_mmap_file
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas        95 Jul 13 12:34 pilot_heartbeat.json
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas      7806 Jul 13 12:34 heartbeat.json
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas      4738 Jul 13 12:34 pilotlog.txt
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas    415812 Jul 13 12:34 log.45482040._002479.job.log.1
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas       357 Jul 13 12:34 output.list
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas       620 Jul 13 12:34 runtime_log
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas    727040 Jul 13 12:34 result.tar.gz
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas      8665 Jul 13 12:34 runtime_log.err
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas       650 Jul 13 12:34 ntXKDmnRAs7n9Rq4apOajLDm4fhM0noT9bVof3QYDmH0oKDmp23X0n.diag
[2025-07-13 12:34:43] -rw-r--r--. 1 boincer umatlas     21323 Jul 13 12:34 stderr.txt
[2025-07-13 12:34:43] HITS file was successfully produced:
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas 271418309 Jul 13 12:33 shared/HITS.pool.root.1
[2025-07-13 12:34:43]  *** Contents of shared directory: ***
[2025-07-13 12:34:43] total 575260
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas 316344722 Jul 13 11:23 ATLAS.root_0
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 11:23 start_atlas.sh
[2025-07-13 12:34:43] -rw-r--r--. 2 boincer umatlas    542885 Jul 13 11:23 input.tar.gz
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas 271418309 Jul 13 12:33 HITS.pool.root.1
[2025-07-13 12:34:43] -rw-------. 1 boincer umatlas    727040 Jul 13 12:34 result.tar.gz
12:34:44 (714180): run_atlas exited; CPU time 31644.035114
12:34:44 (714180): called boinc_finish(0)

</stderr_txt>
]]>

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