Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:46:06 (3741861): wrapper (7.7.26015): starting
04:46:06 (3741861): wrapper: running run_atlas (--nthreads 8)
[2025-07-13 04:46:06] Arguments: --nthreads 8
[2025-07-13 04:46:06] Threads: 8
[2025-07-13 04:46:06] Checking for CVMFS
[2025-07-13 04:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-13 04:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-13 04:46:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-13 04:46:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-13 04:46:07] 2.12.6.0 99509 6886 148996 148272 2 10 40412764 40960000 14 16776704 0 89223872 99.652 74864908 36050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-13 04:46:07] CVMFS is ok
[2025-07-13 04:46:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-13 04:46:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-13 04:46:07] Further information can be found at the LHC@home message board.
[2025-07-13 04:46:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-13 04:46:07] Checking for apptainer binary...
[2025-07-13 04:46:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-13 04:46:07] Running /usr/bin/apptainer --version
[2025-07-13 04:46:07] apptainer version 1.4.1-1.el9
[2025-07-13 04:46:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-13 04:46:07] c8-16-2.aglt2.org
[2025-07-13 04:46:07] apptainer works
[2025-07-13 04:46:07] Set ATHENA_PROC_NUMBER=8
[2025-07-13 04:46:07] Set ATHENA_CORE_NUMBER=8
[2025-07-13 04:46:07] Starting ATLAS job with PandaID=6720606877
[2025-07-13 04:46:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-13 05:34:12]  *** The last 200 lines of the pilot log: ***
[2025-07-13 05:34:12]  mtime=0
[2025-07-13 05:34:12]  protocol_id=None
[2025-07-13 05:34:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-13 05:34:12]  replicas=None
[2025-07-13 05:34:12]  scope=mc23_13p6TeV
[2025-07-13 05:34:12]  status=None
[2025-07-13 05:34:12]  status_code=0
[2025-07-13 05:34:12]  storage_token=
[2025-07-13 05:34:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6720606877/log.45482040._002188.job.log.tgz.1
[2025-07-13 05:34:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/a8/log.45482040._002188.job.log.tgz.1
[2025-07-13 05:34:12]  workdir=None
[2025-07-13 05:34:12] ]
[2025-07-13 05:34:12] 2025-07-13 09:33:35,501 | INFO     | transferring file log.45482040._002188.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6720606877/log.45482040._002188.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-13 05:34:12] 2025-07-13 09:33:35,501 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6720606877/log.45482040._002188.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482040._002188.job
[2025-07-13 05:34:12] 2025-07-13 09:33:35,513 | INFO     | adding to output.list: log.45482040._002188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/a8/log.45482040._002188.job.log.tg
[2025-07-13 05:34:12] 2025-07-13 09:33:35,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-13 05:34:12] 2025-07-13 09:33:35,513 | INFO     | summary of transferred files:
[2025-07-13 05:34:12] 2025-07-13 09:33:35,513 | INFO     |  -- lfn=log.45482040._002188.job.log.tgz.1, status_code=0, status=transferred
[2025-07-13 05:34:12] 2025-07-13 09:33:35,513 | INFO     | stage-out finished correctly
[2025-07-13 05:34:12] 2025-07-13 09:33:35,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-13 05:34:12] 2025-07-13 09:33:35,629 | INFO     | PID=3745863 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-13 05:34:12] 2025-07-13 09:33:35,629 | INFO     | .. there are 2 such processes running
[2025-07-13 05:34:12] 2025-07-13 09:33:37,813 | INFO     | job 6720606877 has state=finished
[2025-07-13 05:34:12] 2025-07-13 09:33:37,813 | INFO     | preparing for final server update for job 6720606877 in state='finished'
[2025-07-13 05:34:12] 2025-07-13 09:33:37,813 | INFO     | this job has now completed (state=finished)
[2025-07-13 05:34:12] 2025-07-13 09:33:37,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-13 05:34:12] 2025-07-13 09:33:37,814 | INFO     | log transfer has been attempted: DONE
[2025-07-13 05:34:12] 2025-07-13 09:33:37,814 | INFO     | job 6720606877 has finished - writing final server update
[2025-07-13 05:34:12] 2025-07-13 09:33:37,814 | INFO     | total number of processed events: 400 (read)
[2025-07-13 05:34:12] 2025-07-13 09:33:37,814 | INFO     | executing command: lscpu
[2025-07-13 05:34:12] 2025-07-13 09:33:37,864 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-13 05:34:12] 2025-07-13 09:33:40,419 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-13 05:34:12] 2025-07-13 09:33:40,423 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3262.876257812509
[2025-07-13 05:34:12] 2025-07-13 09:33:40,430 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720606877/memory_monitor_summary.json (trf name=prmon)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,431 | INFO     | extracted standard info from prmon json
[2025-07-13 05:34:12] 2025-07-13 09:33:40,431 | INFO     | extracted standard memory fields from prmon json
[2025-07-13 05:34:12] 2025-07-13 09:33:40,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-13 05:34:12] 2025-07-13 09:33:40,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-13 05:34:12] 2025-07-13 09:33:40,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | fitting pss+swap vs Time
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | sum of square deviations: 19832930.0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | sum of deviations: -4400415438.0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | mean x: 1752397892.5
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | mean y: 2575068.4
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | -- intersect: 388814452066.6884
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | intersect: 388814452066.6884
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | chi2: 0.0864638432716508
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | -- intersect: 388814452066.6884
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | current memory leak: -221.87 B/s (using 40 data points, chi2=0.09)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | could have reported an average CPU frequency of 3271 MHz (5 samples)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | ..............................
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | . Timing measurements:
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | . get job = 0 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | . initial setup = 2 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,432 | INFO     | . payload setup = 5 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,433 | INFO     | . stage-in = 0 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,433 | INFO     | . payload execution = 2817 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,433 | INFO     | . stage-out = 0 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,433 | INFO     | . log creation = 0 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,433 | INFO     | ..............................
[2025-07-13 05:34:12] 2025-07-13 09:33:40,463 | INFO     | 
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | job summary report
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | --------------------------------------------------
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | PanDA job id: 6720606877
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | task id: 45482040
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | errors: (none)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | pilot state: finished 
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | transexitcode: 0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | exeerrorcode: 0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | exeerrordiag: 
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | exitcode: 0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | exitmsg: OK
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | cpuconsumptiontime: 21132 s
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | nevents: 400
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | neventsw: 0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | pid: 3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | pgrp: 3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | corecount: 8
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | event service: False
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | sizes: {0: 2393499, 3: 2393761, 11: 2393789, 2826: 2419044, 2827: 2428098, 2832: 2428268}
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | --------------------------------------------------
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | 
[2025-07-13 05:34:12] 2025-07-13 09:33:40,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-13 05:34:12] 2025-07-13 09:33:40,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | job 6720606877 has completed (purged errors)
[2025-07-13 05:34:12] 2025-07-13 09:33:40,476 | INFO     | overall cleanup function is called
[2025-07-13 05:34:12] 2025-07-13 09:33:41,299 | WARNING  | process 3752704 can no longer be monitored (due to stat problems) - aborting
[2025-07-13 05:34:12] 2025-07-13 09:33:41,470 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-13 05:34:12] 2025-07-13 09:33:41,482 | INFO     | --- collectZombieJob: --- 10, [3752704]
[2025-07-13 05:34:12] 2025-07-13 09:33:41,482 | INFO     | zombie collector waiting for pid 3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:41,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-13 05:34:12] 2025-07-13 09:33:41,482 | INFO     | collected zombie processes
[2025-07-13 05:34:12] 2025-07-13 09:33:41,482 | INFO     | will attempt to kill all subprocesses of pid=3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:42,213 | INFO     | number of running child processes to parent process 3752704: 1
[2025-07-13 05:34:12] 2025-07-13 09:33:42,213 | INFO     | maximum number of monitored processes: 6
[2025-07-13 05:34:12] 2025-07-13 09:33:42,213 | INFO     | aborting job monitoring since job object (job id=6720606877) has expired
[2025-07-13 05:34:12] 2025-07-13 09:33:42,226 | INFO     | process IDs to be killed: [3752704] (in reverse order)
[2025-07-13 05:34:12] 2025-07-13 09:33:42,311 | WARNING  | found no corresponding commands to process id(s)
[2025-07-13 05:34:12] 2025-07-13 09:33:42,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-13 05:34:12] 2025-07-13 09:33:42,322 | INFO     | did not find any defunct processes belonging to 3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:42,330 | INFO     | did not find any defunct processes belonging to 3752704
[2025-07-13 05:34:12] 2025-07-13 09:33:42,330 | INFO     | ready for new job
[2025-07-13 05:34:12] 2025-07-13 09:33:42,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-13 05:34:12] 2025-07-13 09:33:42,331 | INFO     | ***************************************
[2025-07-13 05:34:12] 2025-07-13 09:33:42,331 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-13 05:34:12] 2025-07-13 09:33:42,331 | INFO     | ***************************************
[2025-07-13 05:34:12] 2025-07-13 09:33:42,331 | INFO     | 
[2025-07-13 05:34:12] 2025-07-13 09:33:42,346 | INFO     | architecture information:
[2025-07-13 05:34:12] 2025-07-13 09:33:42,346 | INFO     | executing command: cat /etc/os-release
[2025-07-13 05:34:12] 2025-07-13 09:33:42,355 | INFO     | cat /etc/os-release:
[2025-07-13 05:34:12] NAME="CentOS Linux"
[2025-07-13 05:34:12] VERSION="7 (Core)"
[2025-07-13 05:34:12] ID="centos"
[2025-07-13 05:34:12] ID_LIKE="rhel fedora"
[2025-07-13 05:34:12] VERSION_ID="7"
[2025-07-13 05:34:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-13 05:34:12] ANSI_COLOR="0;31"
[2025-07-13 05:34:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-13 05:34:12] HOME_URL="https://www.centos.org/"
[2025-07-13 05:34:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-13 05:34:12] 
[2025-07-13 05:34:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-13 05:34:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-13 05:34:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-13 05:34:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-13 05:34:12] 
[2025-07-13 05:34:12] 2025-07-13 09:33:42,355 | INFO     | ***************************************
[2025-07-13 05:34:12] 2025-07-13 09:33:42,858 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-13 05:34:12] 2025-07-13 09:33:42,868 | INFO     | sufficient remaining disk space (173466976256 B)
[2025-07-13 05:34:12] 2025-07-13 09:33:42,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-13 05:34:12] 2025-07-13 09:33:42,868 | INFO     | current server update state: UPDATING_FINAL
[2025-07-13 05:34:12] 2025-07-13 09:33:42,868 | INFO     | update_server=False
[2025-07-13 05:34:12] 2025-07-13 09:33:42,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-13 05:34:12] 2025-07-13 09:33:42,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-13 05:34:12] 2025-07-13 09:33:42,869 | INFO     | will abort loop
[2025-07-13 05:34:12] 2025-07-13 09:33:43,385 | INFO     | all data control threads have been joined
[2025-07-13 05:34:12] 2025-07-13 09:33:43,526 | INFO     | all job control threads have been joined
[2025-07-13 05:34:12] 2025-07-13 09:33:43,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-13 05:34:12] 2025-07-13 09:33:43,614 | INFO     | all payload control threads have been joined
[2025-07-13 05:34:12] 2025-07-13 09:33:43,874 | INFO     | [job] retrieve thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:43,874 | INFO     | [job] job monitor thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:43,941 | INFO     | [payload] validate_post thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,158 | INFO     | [data] copytool_in thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,382 | INFO     | [job] validate thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,390 | INFO     | [data] control thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,437 | INFO     | [job] create_data_payload thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,501 | INFO     | [payload] validate_pre thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,532 | INFO     | [job] control thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,619 | INFO     | [payload] control thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:44,866 | INFO     | [payload] execute_payloads thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:45,039 | INFO     | [payload] failed_post thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:45,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-13 05:34:12] 2025-07-13 09:33:45,558 | INFO     | [data] copytool_out thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:46,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-13 05:34:12] 2025-07-13 09:33:46,479 | INFO     | [job] queue monitor thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:50,085 | INFO     | [data] queue_monitor thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:53,385 | INFO     | job.realtimelogging is not enabled
[2025-07-13 05:34:12] 2025-07-13 09:33:54,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-13 05:34:12] 2025-07-13 09:33:56,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331467978560)>', '<ExcThread(monitor, started 140330968000256)>']
[2025-07-13 05:34:12] 2025-07-13 09:34:01,200 | INFO     | all workflow threads have been joined
[2025-07-13 05:34:12] 2025-07-13 09:34:01,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-13 05:34:12] 2025-07-13 09:34:01,201 | INFO     | traces error code: 0
[2025-07-13 05:34:12] 2025-07-13 09:34:01,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-13 05:34:12] 2025-07-13 09:34:11,995 | INFO     | PID=3745863 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-13 05:34:12] 2025-07-13 09:34:11,995 | INFO     | .. there are 2 such processes running
[2025-07-13 05:34:12] 2025-07-13 09:34:11,996 | INFO     | found 0 job(s) in 20 queues
[2025-07-13 05:34:12] 2025-07-13 09:34:11,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-13 05:34:12] 2025-07-13 09:34:11,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-13 05:34:12] 2025-07-13 09:34:11,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-13 05:34:12] 2025-07-13 09:34:11,996 | INFO     | [monitor] control thread has ended
[2025-07-13 05:34:12] 2025-07-13 09:34:12,055 [wrapper] ==== pilot stdout END ====
[2025-07-13 05:34:12] 2025-07-13 09:34:12,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-13 05:34:12] 2025-07-13 09:34:12,058 [wrapper] pilotpid: 3745863
[2025-07-13 05:34:12] 2025-07-13 09:34:12,060 [wrapper] Pilot exit status: 0
[2025-07-13 05:34:12] 2025-07-13 09:34:12,076 [wrapper] pandaids: 6720606877
[2025-07-13 05:34:12] 2025-07-13 09:34:12,140 [wrapper] cleanup supervisor_pilot 3904257 3745864
[2025-07-13 05:34:12] 2025-07-13 09:34:12,142 [wrapper] Test setup, not cleaning
[2025-07-13 05:34:12] 2025-07-13 09:34:12,143 [wrapper] apfmon messages muted
[2025-07-13 05:34:12] 2025-07-13 09:34:12,145 [wrapper] ==== wrapper stdout END ====
[2025-07-13 05:34:12] 2025-07-13 09:34:12,146 [wrapper] ==== wrapper stderr END ====
[2025-07-13 05:34:12]  *** Error codes and diagnostics ***
[2025-07-13 05:34:12]     "exeErrorCode": 0,
[2025-07-13 05:34:12]     "exeErrorDiag": "",
[2025-07-13 05:34:12]     "pilotErrorCode": 0,
[2025-07-13 05:34:12]     "pilotErrorDiag": "",
[2025-07-13 05:34:12]  *** Listing of results directory ***
[2025-07-13 05:34:12] total 569908
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas    530466 Jul  5 00:20 pilot3.tar.gz
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas      5112 Jul  5 00:53 queuedata.json
[2025-07-13 05:34:12] -rwx------. 1 boincer umatlas     36292 Jul  5 00:54 runpilot2-wrapper.sh
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas       100 Jul 13 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-13 05:34:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 13 04:46 run_atlas
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas       105 Jul 13 04:46 job.xml
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas 317191702 Jul 13 04:46 EVNT.45482038._000088.pool.root.1
[2025-07-13 05:34:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 13 04:46 shared
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas    542893 Jul 13 04:46 input.tar.gz
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 04:46 start_atlas.sh
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas         0 Jul 13 04:46 boinc_lockfile
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas      2543 Jul 13 04:46 pandaJob.out
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas    976211 Jul 13 04:46 agis_schedconf.cvmfs.json
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas   1588641 Jul 13 04:46 agis_ddmendpoints.agis.ALL.json
[2025-07-13 05:34:12] drwx------. 4 boincer umatlas      4096 Jul 13 04:46 pilot3
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas      7161 Jul 13 05:28 init_data.xml
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas       529 Jul 13 05:33 boinc_task_state.xml
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas 261331576 Jul 13 05:33 HITS.45482040._002188.pool.root.1
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas      1022 Jul 13 05:33 memory_monitor_summary.json
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas    287179 Jul 13 05:33 log.45482040._002188.job.log.tgz.1
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas      7762 Jul 13 05:33 heartbeat.json
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 13 05:34 boinc_mmap_file
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas        27 Jul 13 05:34 wrapper_checkpoint.txt
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas        95 Jul 13 05:34 pilot_heartbeat.json
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas       822 Jul 13 05:34 pilotlog.txt
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas    309541 Jul 13 05:34 log.45482040._002188.job.log.1
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas       357 Jul 13 05:34 output.list
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas       620 Jul 13 05:34 runtime_log
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas    614400 Jul 13 05:34 result.tar.gz
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas      8655 Jul 13 05:34 runtime_log.err
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas       650 Jul 13 05:34 oM6LDmS69r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmat9KDmujYFdn.diag
[2025-07-13 05:34:12] -rw-r--r--. 1 boincer umatlas     21739 Jul 13 05:34 stderr.txt
[2025-07-13 05:34:12] HITS file was successfully produced:
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas 261331576 Jul 13 05:33 shared/HITS.pool.root.1
[2025-07-13 05:34:12]  *** Contents of shared directory: ***
[2025-07-13 05:34:12] total 566124
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas 317191702 Jul 13 04:46 ATLAS.root_0
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas    542893 Jul 13 04:46 input.tar.gz
[2025-07-13 05:34:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 04:46 start_atlas.sh
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas 261331576 Jul 13 05:33 HITS.pool.root.1
[2025-07-13 05:34:12] -rw-------. 1 boincer umatlas    614400 Jul 13 05:34 result.tar.gz
05:34:13 (3741861): run_atlas exited; CPU time 21159.980921
05:34:13 (3741861): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN