Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:28:22 (2414878): wrapper (7.7.26015): starting
00:28:22 (2414878): wrapper: running run_atlas (--nthreads 8)
[2025-07-13 00:28:22] Arguments: --nthreads 8
[2025-07-13 00:28:22] Threads: 8
[2025-07-13 00:28:22] Checking for CVMFS
[2025-07-13 00:28:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-13 00:28:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-13 00:28:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-13 00:28:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-13 00:28:23] 2.13.1.0 109206 1781 159268 148267 2 18 23908230 39288833 3718 16776704 0 2171273 98.023 7980632 33649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-13 00:28:23] CVMFS is ok
[2025-07-13 00:28:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-13 00:28:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-13 00:28:23] Further information can be found at the LHC@home message board.
[2025-07-13 00:28:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-13 00:28:23] Checking for apptainer binary...
[2025-07-13 00:28:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-13 00:28:23] Running /usr/bin/apptainer --version
[2025-07-13 00:28:23] apptainer version 1.4.1-1.el9
[2025-07-13 00:28:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-13 00:28:23] c-211-2.aglt2.org
[2025-07-13 00:28:23] apptainer works
[2025-07-13 00:28:23] Set ATHENA_PROC_NUMBER=8
[2025-07-13 00:28:23] Set ATHENA_CORE_NUMBER=8
[2025-07-13 00:28:23] Starting ATLAS job with PandaID=6720590434
[2025-07-13 00:28:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-13 01:55:50]  *** The last 200 lines of the pilot log: ***
[2025-07-13 01:55:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-13 01:55:50]  replicas=None
[2025-07-13 01:55:50]  scope=mc23_13p6TeV
[2025-07-13 01:55:50]  status=None
[2025-07-13 01:55:50]  status_code=0
[2025-07-13 01:55:50]  storage_token=
[2025-07-13 01:55:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6720590434/log.45482062._004363.job.log.tgz.1
[2025-07-13 01:55:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/5e/log.45482062._004363.job.log.tgz.1
[2025-07-13 01:55:50]  workdir=None
[2025-07-13 01:55:50] ]
[2025-07-13 01:55:50] 2025-07-13 05:55:12,750 | INFO     | monitor loop #396: job 0:6720590434 is in state 'stageout'
[2025-07-13 01:55:50] 2025-07-13 05:55:12,763 | WARNING  | aborting job monitor tasks since payload process 2426300 is not running
[2025-07-13 01:55:50] 2025-07-13 05:55:12,763 | INFO     | transferring file log.45482062._004363.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6720590434/log.45482062._004363.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-13 01:55:50] 2025-07-13 05:55:12,763 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6720590434/log.45482062._004363.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482062._004363.job
[2025-07-13 01:55:50] 2025-07-13 05:55:12,774 | INFO     | adding to output.list: log.45482062._004363.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/96/5e/log.45482062._004363.job.log.tg
[2025-07-13 01:55:50] 2025-07-13 05:55:12,775 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-13 01:55:50] 2025-07-13 05:55:12,775 | INFO     | summary of transferred files:
[2025-07-13 01:55:50] 2025-07-13 05:55:12,775 | INFO     |  -- lfn=log.45482062._004363.job.log.tgz.1, status_code=0, status=transferred
[2025-07-13 01:55:50] 2025-07-13 05:55:12,775 | INFO     | stage-out finished correctly
[2025-07-13 01:55:50] 2025-07-13 05:55:13,706 | INFO     | PID=2418828 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-13 01:55:50] 2025-07-13 05:55:13,707 | INFO     | .. there are 6 such processes running
[2025-07-13 01:55:50] 2025-07-13 05:55:13,794 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-13 01:55:50] 2025-07-13 05:55:15,266 | INFO     | monitor loop #397: job 0:6720590434 is in state 'finished'
[2025-07-13 01:55:50] 2025-07-13 05:55:15,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-13 01:55:50] 2025-07-13 05:55:15,799 | INFO     | job 6720590434 has state=finished
[2025-07-13 01:55:50] 2025-07-13 05:55:15,799 | INFO     | preparing for final server update for job 6720590434 in state='finished'
[2025-07-13 01:55:50] 2025-07-13 05:55:15,800 | INFO     | this job has now completed (state=finished)
[2025-07-13 01:55:50] 2025-07-13 05:55:15,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-13 01:55:50] 2025-07-13 05:55:15,800 | INFO     | log transfer has been attempted: DONE
[2025-07-13 01:55:50] 2025-07-13 05:55:15,800 | INFO     | job 6720590434 has finished - writing final server update
[2025-07-13 01:55:50] 2025-07-13 05:55:15,800 | INFO     | total number of processed events: 400 (read)
[2025-07-13 01:55:50] 2025-07-13 05:55:15,801 | INFO     | executing command: lscpu
[2025-07-13 01:55:50] 2025-07-13 05:55:15,823 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-13 01:55:50] 2025-07-13 05:55:17,769 | INFO     | monitor loop #398: job 0:6720590434 is in state 'finished'
[2025-07-13 01:55:50] 2025-07-13 05:55:17,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-13 01:55:50] 2025-07-13 05:55:17,996 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-13 01:55:50] 2025-07-13 05:55:17,999 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2961.1302750000004
[2025-07-13 01:55:50] 2025-07-13 05:55:18,003 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720590434/memory_monitor_summary.json (trf name=prmon)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,003 | INFO     | extracted standard info from prmon json
[2025-07-13 01:55:50] 2025-07-13 05:55:18,003 | INFO     | extracted standard memory fields from prmon json
[2025-07-13 01:55:50] 2025-07-13 05:55:18,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-13 01:55:50] 2025-07-13 05:55:18,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-13 01:55:50] 2025-07-13 05:55:18,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-13 01:55:50] 2025-07-13 05:55:18,005 | INFO     | fitting pss+swap vs Time
[2025-07-13 01:55:50] 2025-07-13 05:55:18,005 | INFO     | sum of square deviations: 147126479.5
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | sum of deviations: -18204094488.499996
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | mean x: 1752383584.5
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | mean y: 2825800.064102564
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | -- intersect: 216826856802.14026
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | intersect: 216826856802.14026
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | chi2: 0.12867945284368656
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | -- intersect: 216826856802.14026
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | current memory leak: -123.73 B/s (using 78 data points, chi2=0.13)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | could have reported an average CPU frequency of 2866 MHz (6 samples)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,006 | INFO     | ..............................
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . Timing measurements:
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . get job = 0 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . initial setup = 2 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . payload setup = 4 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . stage-in = 0 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . payload execution = 5178 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . stage-out = 0 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | . log creation = 0 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,007 | INFO     | ..............................
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | 
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | job summary report
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | --------------------------------------------------
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | PanDA job id: 6720590434
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | task id: 45482062
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | errors: (none)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | pilot state: finished 
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | transexitcode: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | exeerrorcode: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | exeerrordiag: 
[2025-07-13 01:55:50] 2025-07-13 05:55:18,064 | INFO     | exitcode: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | exitmsg: OK
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | cpuconsumptiontime: 38903 s
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | nevents: 400
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | neventsw: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | pid: 2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | pgrp: 2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | corecount: 8
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | event service: False
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | sizes: {0: 2393489, 3: 2393751, 11: 2393779, 5186: 2420329, 5187: 2420328, 5189: 2429382, 5190: 2429566, 5194: 2429760}
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | --------------------------------------------------
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | 
[2025-07-13 01:55:50] 2025-07-13 05:55:18,065 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | job 6720590434 has completed (purged errors)
[2025-07-13 01:55:50] 2025-07-13 05:55:18,077 | INFO     | overall cleanup function is called
[2025-07-13 01:55:50] 2025-07-13 05:55:19,084 | INFO     | --- collectZombieJob: --- 10, [2426300]
[2025-07-13 01:55:50] 2025-07-13 05:55:19,084 | INFO     | zombie collector waiting for pid 2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:19,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-13 01:55:50] 2025-07-13 05:55:19,085 | INFO     | collected zombie processes
[2025-07-13 01:55:50] 2025-07-13 05:55:19,085 | INFO     | will attempt to kill all subprocesses of pid=2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:19,206 | INFO     | process IDs to be killed: [2426300] (in reverse order)
[2025-07-13 01:55:50] 2025-07-13 05:55:19,242 | WARNING  | found no corresponding commands to process id(s)
[2025-07-13 01:55:50] 2025-07-13 05:55:19,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-13 01:55:50] 2025-07-13 05:55:19,246 | INFO     | did not find any defunct processes belonging to 2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:19,249 | INFO     | did not find any defunct processes belonging to 2426300
[2025-07-13 01:55:50] 2025-07-13 05:55:19,250 | INFO     | ready for new job
[2025-07-13 01:55:50] 2025-07-13 05:55:19,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-13 01:55:50] 2025-07-13 05:55:19,251 | INFO     | ***************************************
[2025-07-13 01:55:50] 2025-07-13 05:55:19,251 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-13 01:55:50] 2025-07-13 05:55:19,251 | INFO     | ***************************************
[2025-07-13 01:55:50] 2025-07-13 05:55:19,251 | INFO     | 
[2025-07-13 01:55:50] 2025-07-13 05:55:19,252 | INFO     | architecture information:
[2025-07-13 01:55:50] 2025-07-13 05:55:19,252 | INFO     | executing command: cat /etc/os-release
[2025-07-13 01:55:50] 2025-07-13 05:55:19,260 | INFO     | cat /etc/os-release:
[2025-07-13 01:55:50] NAME="CentOS Linux"
[2025-07-13 01:55:50] VERSION="7 (Core)"
[2025-07-13 01:55:50] ID="centos"
[2025-07-13 01:55:50] ID_LIKE="rhel fedora"
[2025-07-13 01:55:50] VERSION_ID="7"
[2025-07-13 01:55:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-13 01:55:50] ANSI_COLOR="0;31"
[2025-07-13 01:55:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-13 01:55:50] HOME_URL="https://www.centos.org/"
[2025-07-13 01:55:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-13 01:55:50] 
[2025-07-13 01:55:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-13 01:55:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-13 01:55:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-13 01:55:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-13 01:55:50] 
[2025-07-13 01:55:50] 2025-07-13 05:55:19,260 | INFO     | ***************************************
[2025-07-13 01:55:50] 2025-07-13 05:55:19,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-13 01:55:50] 2025-07-13 05:55:19,772 | INFO     | sufficient remaining disk space (53603205120 B)
[2025-07-13 01:55:50] 2025-07-13 05:55:19,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-13 01:55:50] 2025-07-13 05:55:19,773 | INFO     | current server update state: UPDATING_FINAL
[2025-07-13 01:55:50] 2025-07-13 05:55:19,773 | INFO     | update_server=False
[2025-07-13 01:55:50] 2025-07-13 05:55:19,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-13 01:55:50] 2025-07-13 05:55:19,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-13 01:55:50] 2025-07-13 05:55:19,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-13 01:55:50] 2025-07-13 05:55:20,051 | INFO     | all payload control threads have been joined
[2025-07-13 01:55:50] 2025-07-13 05:55:20,147 | INFO     | all data control threads have been joined
[2025-07-13 01:55:50] 2025-07-13 05:55:20,271 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-13 01:55:50] 2025-07-13 05:55:20,271 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-13 01:55:50] 2025-07-13 05:55:20,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-13 01:55:50] 2025-07-13 05:55:20,271 | INFO     | will abort loop
[2025-07-13 01:55:50] 2025-07-13 05:55:20,776 | INFO     | [job] queue monitor thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:20,778 | INFO     | [job] retrieve thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:20,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-13 01:55:50] 2025-07-13 05:55:20,963 | INFO     | [data] copytool_in thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,056 | INFO     | [payload] control thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,080 | INFO     | all job control threads have been joined
[2025-07-13 01:55:50] 2025-07-13 05:55:21,086 | INFO     | [payload] failed_post thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,152 | INFO     | [data] control thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,156 | INFO     | [payload] validate_pre thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,275 | INFO     | [job] job monitor thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,492 | INFO     | [job] validate thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,596 | INFO     | [job] create_data_payload thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,645 | INFO     | [payload] validate_post thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:21,886 | INFO     | [payload] execute_payloads thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:22,086 | INFO     | [job] control thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:22,845 | INFO     | [data] copytool_out thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:23,860 | INFO     | [data] queue_monitor thread has finished
[2025-07-13 01:55:50] 2025-07-13 05:55:24,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956316849984)>', '<ExcThread(monitor, started 139955535869696)>']
[2025-07-13 01:55:50] 2025-07-13 05:55:29,393 | INFO     | all workflow threads have been joined
[2025-07-13 01:55:50] 2025-07-13 05:55:29,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-13 01:55:50] 2025-07-13 05:55:29,393 | INFO     | traces error code: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:29,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-13 01:55:50] 2025-07-13 05:55:49,942 | INFO     | PID=2418828 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-13 01:55:50] 2025-07-13 05:55:49,942 | INFO     | .. there are 6 such processes running
[2025-07-13 01:55:50] 2025-07-13 05:55:49,943 | INFO     | found 0 job(s) in 20 queues
[2025-07-13 01:55:50] 2025-07-13 05:55:49,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-13 01:55:50] 2025-07-13 05:55:49,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-13 01:55:50] 2025-07-13 05:55:49,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-13 01:55:50] 2025-07-13 05:55:49,943 | INFO     | [monitor] control thread has ended
[2025-07-13 01:55:50] 2025-07-13 05:55:50,014 [wrapper] ==== pilot stdout END ====
[2025-07-13 01:55:50] 2025-07-13 05:55:50,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-13 01:55:50] 2025-07-13 05:55:50,017 [wrapper] pilotpid: 2418828
[2025-07-13 01:55:50] 2025-07-13 05:55:50,018 [wrapper] Pilot exit status: 0
[2025-07-13 01:55:50] 2025-07-13 05:55:50,024 [wrapper] pandaids: 6720590434
[2025-07-13 01:55:50] 2025-07-13 05:55:50,049 [wrapper] cleanup supervisor_pilot 2496994 2418829
[2025-07-13 01:55:50] 2025-07-13 05:55:50,051 [wrapper] Test setup, not cleaning
[2025-07-13 01:55:50] 2025-07-13 05:55:50,052 [wrapper] apfmon messages muted
[2025-07-13 01:55:50] 2025-07-13 05:55:50,054 [wrapper] ==== wrapper stdout END ====
[2025-07-13 01:55:50] 2025-07-13 05:55:50,055 [wrapper] ==== wrapper stderr END ====
[2025-07-13 01:55:50]  *** Error codes and diagnostics ***
[2025-07-13 01:55:50]     "exeErrorCode": 0,
[2025-07-13 01:55:50]     "exeErrorDiag": "",
[2025-07-13 01:55:50]     "pilotErrorCode": 0,
[2025-07-13 01:55:50]     "pilotErrorDiag": "",
[2025-07-13 01:55:50]  *** Listing of results directory ***
[2025-07-13 01:55:50] total 570748
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas    530466 Jul  4 19:17 pilot3.tar.gz
[2025-07-13 01:55:50] -rwx------. 1 boincer umatlas     36292 Jul  4 19:21 runpilot2-wrapper.sh
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas      5112 Jul  4 19:21 queuedata.json
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas       100 Jul 13 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-13 01:55:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 13 00:28 run_atlas
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas       105 Jul 13 00:28 job.xml
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas 317382911 Jul 13 00:28 EVNT.45482060._000175.pool.root.1
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 00:28 start_atlas.sh
[2025-07-13 01:55:50] drwxrwx--x. 2 boincer umatlas      4096 Jul 13 00:28 shared
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas    542873 Jul 13 00:28 input.tar.gz
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas         0 Jul 13 00:28 boinc_lockfile
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas      2532 Jul 13 00:28 pandaJob.out
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas    976534 Jul 13 00:28 agis_schedconf.cvmfs.json
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas   1588641 Jul 13 00:28 agis_ddmendpoints.agis.ALL.json
[2025-07-13 01:55:50] drwx------. 4 boincer umatlas      4096 Jul 13 00:28 pilot3
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas      6652 Jul 13 01:46 init_data.xml
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas       529 Jul 13 01:54 boinc_task_state.xml
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas 261546757 Jul 13 01:54 HITS.45482062._004363.pool.root.1
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas      1028 Jul 13 01:55 memory_monitor_summary.json
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas    308690 Jul 13 01:55 log.45482062._004363.job.log.tgz.1
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas      7807 Jul 13 01:55 heartbeat.json
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas      8192 Jul 13 01:55 boinc_mmap_file
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas        27 Jul 13 01:55 wrapper_checkpoint.txt
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas        95 Jul 13 01:55 pilot_heartbeat.json
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas       822 Jul 13 01:55 pilotlog.txt
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas    515895 Jul 13 01:55 log.45482062._004363.job.log.1
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas       357 Jul 13 01:55 output.list
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas       620 Jul 13 01:55 runtime_log
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas    839680 Jul 13 01:55 result.tar.gz
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas       649 Jul 13 01:55 7GAMDmrt4r7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTYoKDm1mqhKn.diag
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas      8655 Jul 13 01:55 runtime_log.err
[2025-07-13 01:55:50] -rw-r--r--. 1 boincer umatlas     21986 Jul 13 01:55 stderr.txt
[2025-07-13 01:55:50] HITS file was successfully produced:
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas 261546757 Jul 13 01:54 shared/HITS.pool.root.1
[2025-07-13 01:55:50]  *** Contents of shared directory: ***
[2025-07-13 01:55:50] total 566744
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas 317382911 Jul 13 00:28 ATLAS.root_0
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 13 00:28 start_atlas.sh
[2025-07-13 01:55:50] -rw-r--r--. 2 boincer umatlas    542873 Jul 13 00:28 input.tar.gz
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas 261546757 Jul 13 01:54 HITS.pool.root.1
[2025-07-13 01:55:50] -rw-------. 1 boincer umatlas    839680 Jul 13 01:55 result.tar.gz
01:55:51 (2414878): run_atlas exited; CPU time 38978.746954
01:55:51 (2414878): called boinc_finish(0)

</stderr_txt>
]]>

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