Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:16 (3335332): wrapper (7.7.26015): starting
17:46:16 (3335332): wrapper: running run_atlas (--nthreads 12)
[2025-07-12 17:46:16] Arguments: --nthreads 12
[2025-07-12 17:46:16] Threads: 12
[2025-07-12 17:46:16] Checking for CVMFS
[2025-07-12 17:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-12 17:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-12 17:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-12 17:46:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-12 17:46:16] 2.12.6.0 58746 6226 304456 148257 2 78 19596331 29414401 7545 16776704 0 10117170 98.943 41858229 10480 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-12 17:46:16] CVMFS is ok
[2025-07-12 17:46:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-12 17:46:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-12 17:46:16] Further information can be found at the LHC@home message board.
[2025-07-12 17:46:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-12 17:46:16] Checking for apptainer binary...
[2025-07-12 17:46:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-12 17:46:16] Running /usr/bin/apptainer --version
[2025-07-12 17:46:16] apptainer version 1.4.1-1.el9
[2025-07-12 17:46:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-12 17:46:17] c6-5-37-4.aglt2.org
[2025-07-12 17:46:17] apptainer works
[2025-07-12 17:46:17] Set ATHENA_PROC_NUMBER=12
[2025-07-12 17:46:17] Set ATHENA_CORE_NUMBER=12
[2025-07-12 17:46:17] Starting ATLAS job with PandaID=6720659902
[2025-07-12 17:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 18:52:44]  *** The last 200 lines of the pilot log: ***
[2025-07-12 18:52:44]  lfn=log.45482062._008420.job.log.tgz.1
[2025-07-12 18:52:44]  mtime=0
[2025-07-12 18:52:44]  protocol_id=None
[2025-07-12 18:52:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-12 18:52:44]  replicas=None
[2025-07-12 18:52:44]  scope=mc23_13p6TeV
[2025-07-12 18:52:44]  status=None
[2025-07-12 18:52:44]  status_code=0
[2025-07-12 18:52:44]  storage_token=
[2025-07-12 18:52:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6720659902/log.45482062._008420.job.log.tgz.1
[2025-07-12 18:52:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/fd/log.45482062._008420.job.log.tgz.1
[2025-07-12 18:52:44]  workdir=None
[2025-07-12 18:52:44] ]
[2025-07-12 18:52:44] 2025-07-12 22:52:05,782 | INFO     | transferring file log.45482062._008420.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6720659902/log.45482062._008420.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-12 18:52:44] 2025-07-12 22:52:05,783 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6720659902/log.45482062._008420.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482062._008420.job
[2025-07-12 18:52:44] 2025-07-12 22:52:05,799 | INFO     | adding to output.list: log.45482062._008420.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/fd/log.45482062._008420.job.log.tg
[2025-07-12 18:52:44] 2025-07-12 22:52:05,801 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-12 18:52:44] 2025-07-12 22:52:05,801 | INFO     | summary of transferred files:
[2025-07-12 18:52:44] 2025-07-12 22:52:05,801 | INFO     |  -- lfn=log.45482062._008420.job.log.tgz.1, status_code=0, status=transferred
[2025-07-12 18:52:44] 2025-07-12 22:52:05,802 | INFO     | stage-out finished correctly
[2025-07-12 18:52:44] 2025-07-12 22:52:06,183 | INFO     | PID=3338976 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-12 18:52:44] 2025-07-12 22:52:06,183 | INFO     | .. there are 8 such processes running
[2025-07-12 18:52:44] 2025-07-12 22:52:07,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-12 18:52:44] 2025-07-12 22:52:07,440 | INFO     | monitor loop #296: job 0:6720659902 is in state 'finished'
[2025-07-12 18:52:44] 2025-07-12 22:52:07,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-12 18:52:44] 2025-07-12 22:52:09,063 | INFO     | job 6720659902 has state=finished
[2025-07-12 18:52:44] 2025-07-12 22:52:09,064 | INFO     | preparing for final server update for job 6720659902 in state='finished'
[2025-07-12 18:52:44] 2025-07-12 22:52:09,064 | INFO     | this job has now completed (state=finished)
[2025-07-12 18:52:44] 2025-07-12 22:52:09,064 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-12 18:52:44] 2025-07-12 22:52:09,064 | INFO     | log transfer has been attempted: DONE
[2025-07-12 18:52:44] 2025-07-12 22:52:09,064 | INFO     | job 6720659902 has finished - writing final server update
[2025-07-12 18:52:44] 2025-07-12 22:52:09,065 | INFO     | total number of processed events: 400 (read)
[2025-07-12 18:52:44] 2025-07-12 22:52:09,065 | INFO     | executing command: lscpu
[2025-07-12 18:52:44] 2025-07-12 22:52:09,121 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-12 18:52:44] 2025-07-12 22:52:09,942 | INFO     | monitor loop #297: job 0:6720659902 is in state 'finished'
[2025-07-12 18:52:44] 2025-07-12 22:52:09,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,015 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-12 18:52:44] 2025-07-12 22:52:12,023 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3296.8355178571423
[2025-07-12 18:52:44] 2025-07-12 22:52:12,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720659902/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,034 | INFO     | extracted standard info from prmon json
[2025-07-12 18:52:44] 2025-07-12 22:52:12,034 | INFO     | extracted standard memory fields from prmon json
[2025-07-12 18:52:44] 2025-07-12 22:52:12,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-12 18:52:44] 2025-07-12 22:52:12,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-12 18:52:44] 2025-07-12 22:52:12,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-12 18:52:44] 2025-07-12 22:52:12,037 | INFO     | fitting pss+swap vs Time
[2025-07-12 18:52:44] 2025-07-12 22:52:12,037 | INFO     | sum of square deviations: 60482994.5
[2025-07-12 18:52:44] 2025-07-12 22:52:12,037 | INFO     | sum of deviations: -5341206299.0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,037 | INFO     | mean x: 1752358856.5
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | mean y: 2575082.6896551726
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | -- intersect: 154752025565.7711
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | intersect: 154752025565.7711
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | chi2: 0.1256092363166502
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | -- intersect: 154752025565.7711
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | current memory leak: -88.31 B/s (using 58 data points, chi2=0.13)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,038 | INFO     | could have reported an average CPU frequency of 3177 MHz (6 samples)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | ..............................
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . Timing measurements:
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . get job = 0 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . initial setup = 3 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . payload setup = 5 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . stage-in = 0 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . payload execution = 3912 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . stage-out = 0 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | . log creation = 0 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,039 | INFO     | ..............................
[2025-07-12 18:52:44] 2025-07-12 22:52:12,129 | INFO     | 
[2025-07-12 18:52:44] 2025-07-12 22:52:12,129 | INFO     | job summary report
[2025-07-12 18:52:44] 2025-07-12 22:52:12,129 | INFO     | --------------------------------------------------
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | PanDA job id: 6720659902
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | task id: 45482062
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | errors: (none)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | pilot state: finished 
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | transexitcode: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | exeerrorcode: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | exeerrordiag: 
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | exitcode: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | exitmsg: OK
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | cpuconsumptiontime: 41626 s
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | nevents: 400
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | neventsw: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | pid: 3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | pgrp: 3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | corecount: 12
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | event service: False
[2025-07-12 18:52:44] 2025-07-12 22:52:12,130 | INFO     | sizes: {0: 2393489, 3: 2393751, 11: 2393779, 3921: 2419667, 3922: 2428665, 3923: 2428721, 3928: 2429043}
[2025-07-12 18:52:44] 2025-07-12 22:52:12,131 | INFO     | --------------------------------------------------
[2025-07-12 18:52:44] 2025-07-12 22:52:12,131 | INFO     | 
[2025-07-12 18:52:44] 2025-07-12 22:52:12,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-12 18:52:44] 2025-07-12 22:52:12,147 | INFO     | job 6720659902 has completed (purged errors)
[2025-07-12 18:52:44] 2025-07-12 22:52:12,147 | INFO     | overall cleanup function is called
[2025-07-12 18:52:44] 2025-07-12 22:52:13,155 | INFO     | --- collectZombieJob: --- 10, [3345975]
[2025-07-12 18:52:44] 2025-07-12 22:52:13,155 | INFO     | zombie collector waiting for pid 3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:13,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 18:52:44] 2025-07-12 22:52:13,155 | INFO     | collected zombie processes
[2025-07-12 18:52:44] 2025-07-12 22:52:13,155 | INFO     | will attempt to kill all subprocesses of pid=3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:13,407 | INFO     | process IDs to be killed: [3345975] (in reverse order)
[2025-07-12 18:52:44] 2025-07-12 22:52:13,492 | WARNING  | found no corresponding commands to process id(s)
[2025-07-12 18:52:44] 2025-07-12 22:52:13,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-12 18:52:44] 2025-07-12 22:52:13,502 | INFO     | did not find any defunct processes belonging to 3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:13,511 | INFO     | did not find any defunct processes belonging to 3345975
[2025-07-12 18:52:44] 2025-07-12 22:52:13,511 | INFO     | ready for new job
[2025-07-12 18:52:44] 2025-07-12 22:52:13,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-12 18:52:44] 2025-07-12 22:52:13,513 | INFO     | ***************************************
[2025-07-12 18:52:44] 2025-07-12 22:52:13,513 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-12 18:52:44] 2025-07-12 22:52:13,513 | INFO     | ***************************************
[2025-07-12 18:52:44] 2025-07-12 22:52:13,513 | INFO     | 
[2025-07-12 18:52:44] 2025-07-12 22:52:13,528 | INFO     | architecture information:
[2025-07-12 18:52:44] 2025-07-12 22:52:13,528 | INFO     | executing command: cat /etc/os-release
[2025-07-12 18:52:44] 2025-07-12 22:52:13,542 | INFO     | cat /etc/os-release:
[2025-07-12 18:52:44] NAME="CentOS Linux"
[2025-07-12 18:52:44] VERSION="7 (Core)"
[2025-07-12 18:52:44] ID="centos"
[2025-07-12 18:52:44] ID_LIKE="rhel fedora"
[2025-07-12 18:52:44] VERSION_ID="7"
[2025-07-12 18:52:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 18:52:44] ANSI_COLOR="0;31"
[2025-07-12 18:52:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 18:52:44] HOME_URL="https://www.centos.org/"
[2025-07-12 18:52:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 18:52:44] 
[2025-07-12 18:52:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 18:52:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 18:52:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 18:52:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 18:52:44] 
[2025-07-12 18:52:44] 2025-07-12 22:52:13,543 | INFO     | ***************************************
[2025-07-12 18:52:44] 2025-07-12 22:52:14,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-12 18:52:44] 2025-07-12 22:52:14,061 | INFO     | sufficient remaining disk space (74944872448 B)
[2025-07-12 18:52:44] 2025-07-12 22:52:14,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 18:52:44] 2025-07-12 22:52:14,062 | INFO     | current server update state: UPDATING_FINAL
[2025-07-12 18:52:44] 2025-07-12 22:52:14,062 | INFO     | update_server=False
[2025-07-12 18:52:44] 2025-07-12 22:52:14,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 18:52:44] 2025-07-12 22:52:14,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 18:52:44] 2025-07-12 22:52:14,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 18:52:44] 2025-07-12 22:52:14,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 18:52:44] 2025-07-12 22:52:14,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 18:52:44] 2025-07-12 22:52:14,064 | INFO     | aborting loop
[2025-07-12 18:52:44] 2025-07-12 22:52:14,105 | INFO     | all job control threads have been joined
[2025-07-12 18:52:44] 2025-07-12 22:52:14,775 | INFO     | all data control threads have been joined
[2025-07-12 18:52:44] 2025-07-12 22:52:15,067 | INFO     | [job] retrieve thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,068 | INFO     | [job] queue monitor thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,069 | INFO     | [job] job monitor thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,111 | INFO     | [job] control thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,212 | INFO     | [data] copytool_in thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,290 | INFO     | all payload control threads have been joined
[2025-07-12 18:52:44] 2025-07-12 22:52:15,352 | INFO     | [payload] validate_pre thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,604 | INFO     | [payload] validate_post thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:15,781 | INFO     | [data] control thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,019 | INFO     | [job] validate thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,069 | INFO     | [data] copytool_out thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,192 | INFO     | [payload] execute_payloads thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,296 | INFO     | [payload] control thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,366 | INFO     | [job] create_data_payload thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:16,588 | INFO     | [payload] failed_post thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:18,068 | INFO     | [data] queue_monitor thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:24,689 | INFO     | job.realtimelogging is not enabled
[2025-07-12 18:52:44] 2025-07-12 22:52:25,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-12 18:52:44] 2025-07-12 22:52:25,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149099247424)>', '<ExcThread(monitor, started 140148297672448)>']
[2025-07-12 18:52:44] 2025-07-12 22:52:30,917 | INFO     | all workflow threads have been joined
[2025-07-12 18:52:44] 2025-07-12 22:52:30,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-12 18:52:44] 2025-07-12 22:52:30,918 | INFO     | traces error code: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:30,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 18:52:44] 2025-07-12 22:52:44,578 | INFO     | PID=3338976 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-12 18:52:44] 2025-07-12 22:52:44,578 | INFO     | .. there are 8 such processes running
[2025-07-12 18:52:44] 2025-07-12 22:52:44,579 | INFO     | found 0 job(s) in 20 queues
[2025-07-12 18:52:44] 2025-07-12 22:52:44,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 18:52:44] 2025-07-12 22:52:44,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-12 18:52:44] 2025-07-12 22:52:44,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-12 18:52:44] 2025-07-12 22:52:44,580 | INFO     | [monitor] control thread has ended
[2025-07-12 18:52:44] 2025-07-12 22:52:44,743 [wrapper] ==== pilot stdout END ====
[2025-07-12 18:52:44] 2025-07-12 22:52:44,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 18:52:44] 2025-07-12 22:52:44,748 [wrapper] pilotpid: 3338976
[2025-07-12 18:52:44] 2025-07-12 22:52:44,750 [wrapper] Pilot exit status: 0
[2025-07-12 18:52:44] 2025-07-12 22:52:44,759 [wrapper] pandaids: 6720659902
[2025-07-12 18:52:44] 2025-07-12 22:52:44,815 [wrapper] cleanup supervisor_pilot 3554710 3338977
[2025-07-12 18:52:44] 2025-07-12 22:52:44,818 [wrapper] Test setup, not cleaning
[2025-07-12 18:52:44] 2025-07-12 22:52:44,820 [wrapper] apfmon messages muted
[2025-07-12 18:52:44] 2025-07-12 22:52:44,821 [wrapper] ==== wrapper stdout END ====
[2025-07-12 18:52:44] 2025-07-12 22:52:44,823 [wrapper] ==== wrapper stderr END ====
[2025-07-12 18:52:44]  *** Error codes and diagnostics ***
[2025-07-12 18:52:44]     "exeErrorCode": 0,
[2025-07-12 18:52:44]     "exeErrorDiag": "",
[2025-07-12 18:52:44]     "pilotErrorCode": 0,
[2025-07-12 18:52:44]     "pilotErrorDiag": "",
[2025-07-12 18:52:44]  *** Listing of results directory ***
[2025-07-12 18:52:44] total 568396
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas    530466 Jul  5 09:50 pilot3.tar.gz
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas      5112 Jul  5 09:52 queuedata.json
[2025-07-12 18:52:44] -rwx------. 1 boincer umatlas     36292 Jul  5 09:53 runpilot2-wrapper.sh
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas       100 Jul 12 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 18:52:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 12 17:46 run_atlas
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas       105 Jul 12 17:46 job.xml
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas 317561511 Jul 12 17:46 EVNT.45482060._000181.pool.root.1
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 17:46 start_atlas.sh
[2025-07-12 18:52:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 12 17:46 shared
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas    542876 Jul 12 17:46 input.tar.gz
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas         0 Jul 12 17:46 boinc_lockfile
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas      2532 Jul 12 17:46 pandaJob.out
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas    976550 Jul 12 17:46 agis_schedconf.cvmfs.json
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas   1588641 Jul 12 17:46 agis_ddmendpoints.agis.ALL.json
[2025-07-12 18:52:44] drwx------. 4 boincer umatlas      4096 Jul 12 17:46 pilot3
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas      6839 Jul 12 18:45 init_data.xml
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas 259064855 Jul 12 18:51 HITS.45482062._008420.pool.root.1
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas       529 Jul 12 18:51 boinc_task_state.xml
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas      1029 Jul 12 18:52 memory_monitor_summary.json
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas    367167 Jul 12 18:52 log.45482062._008420.job.log.tgz.1
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas      7813 Jul 12 18:52 heartbeat.json
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 12 18:52 boinc_mmap_file
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas        27 Jul 12 18:52 wrapper_checkpoint.txt
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas        95 Jul 12 18:52 pilot_heartbeat.json
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas       822 Jul 12 18:52 pilotlog.txt
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas    404116 Jul 12 18:52 log.45482062._008420.job.log.1
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas       357 Jul 12 18:52 output.list
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas       620 Jul 12 18:52 runtime_log
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas    788480 Jul 12 18:52 result.tar.gz
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas      8667 Jul 12 18:52 runtime_log.err
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas       654 Jul 12 18:52 RnjLDmiVIs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDpALDmrOEFsm.diag
[2025-07-12 18:52:44] -rw-r--r--. 1 boincer umatlas     21716 Jul 12 18:52 stderr.txt
[2025-07-12 18:52:44] HITS file was successfully produced:
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas 259064855 Jul 12 18:51 shared/HITS.pool.root.1
[2025-07-12 18:52:44]  *** Contents of shared directory: ***
[2025-07-12 18:52:44] total 564444
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas 317561511 Jul 12 17:46 ATLAS.root_0
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 17:46 start_atlas.sh
[2025-07-12 18:52:44] -rw-r--r--. 2 boincer umatlas    542876 Jul 12 17:46 input.tar.gz
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas 259064855 Jul 12 18:51 HITS.pool.root.1
[2025-07-12 18:52:44] -rw-------. 1 boincer umatlas    788480 Jul 12 18:52 result.tar.gz
18:52:46 (3335332): run_atlas exited; CPU time 41703.398580
18:52:46 (3335332): called boinc_finish(0)

</stderr_txt>
]]>

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