Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:26:19 (649): wrapper (7.7.26015): starting
04:26:19 (649): wrapper: running run_atlas (--nthreads 8)
[2025-07-13 04:26:19] Arguments: --nthreads 8
[2025-07-13 04:26:19] Threads: 8
[2025-07-13 04:26:19] Checking for CVMFS
[2025-07-13 04:26:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-13 04:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-13 04:26:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-13 04:26:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-13 04:26:23] 2.11.2.0 2946 88862 106832 148262 0 238 22421842 25165824 2950 130560 0 64040700 99.857 44293254 3312 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-13 04:26:23] CVMFS is ok
[2025-07-13 04:26:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-13 04:26:23] Checking for apptainer binary...
[2025-07-13 04:26:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-13 04:26:23] Running /usr/bin/apptainer --version
[2025-07-13 04:26:24] apptainer version 1.3.2-1.el7
[2025-07-13 04:26:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-13 06:49:21] cg-vwn485.simple-grid.lan
[2025-07-13 06:49:21] apptainer works
[2025-07-13 06:49:21] Set ATHENA_PROC_NUMBER=8
[2025-07-13 06:49:21] Set ATHENA_CORE_NUMBER=8
[2025-07-13 06:49:21] Starting ATLAS job with PandaID=6720423008
[2025-07-13 06:49:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-13 11:38:41]  *** The last 200 lines of the pilot log: ***
[2025-07-13 11:38:41] 2025-07-13 09:38:03,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-13 11:38:41] 2025-07-13 09:38:03,694 | INFO     | fitting pss+swap vs Time
[2025-07-13 11:38:41] 2025-07-13 09:38:03,695 | INFO     | sum of square deviations: 6953769450.5
[2025-07-13 11:38:41] 2025-07-13 09:38:03,697 | INFO     | sum of deviations: 11004373343.000008
[2025-07-13 11:38:41] 2025-07-13 09:38:03,697 | INFO     | mean x: 1752390802.5
[2025-07-13 11:38:41] 2025-07-13 09:38:03,697 | INFO     | mean y: 2535822.5531914895
[2025-07-13 11:38:41] 2025-07-13 09:38:03,697 | INFO     | -- intersect: -2770630985.8693695
[2025-07-13 11:38:41] 2025-07-13 09:38:03,702 | INFO     | intersect: -2770630985.8693695
[2025-07-13 11:38:41] 2025-07-13 09:38:03,703 | INFO     | chi2: 2.3159636624825977
[2025-07-13 11:38:41] 2025-07-13 09:38:03,703 | INFO     | sum of square deviations: 6590404498.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,705 | INFO     | sum of deviations: 29199629144.999996
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | mean x: 1752390650.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | mean y: 2543344.454873646
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | -- intersect: -7761647322.854526
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | intersect: -7761647322.854526
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | chi2: 1.547505591647431
[2025-07-13 11:38:41] 2025-07-13 09:38:03,706 | INFO     | current chi2=1.547505591647431 (change=33.1809208962898 %)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,707 | INFO     | sum of square deviations: 6239923508.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,709 | INFO     | sum of deviations: 28347026228.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,709 | INFO     | mean x: 1752390497.5
[2025-07-13 11:38:41] 2025-07-13 09:38:03,709 | INFO     | mean y: 2542973.875
[2025-07-13 11:38:41] 2025-07-13 09:38:03,709 | INFO     | -- intersect: -7958301310.617224
[2025-07-13 11:38:41] 2025-07-13 09:38:03,709 | INFO     | intersect: -7958301310.617224
[2025-07-13 11:38:41] 2025-07-13 09:38:03,710 | INFO     | chi2: 1.5480138588866887
[2025-07-13 11:38:41] 2025-07-13 09:38:03,710 | INFO     | current chi2=1.5480138588866887 (change=-0.03284429096742067 %)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,710 | INFO     | right removable region: 271
[2025-07-13 11:38:41] 2025-07-13 09:38:03,710 | INFO     | sum of square deviations: 6590404498.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,712 | INFO     | sum of deviations: -32026386774.000023
[2025-07-13 11:38:41] 2025-07-13 09:38:03,712 | INFO     | mean x: 1752390955.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,713 | INFO     | mean y: 2553731.61732852
[2025-07-13 11:38:41] 2025-07-13 09:38:03,713 | INFO     | -- intersect: 8518381632.791061
[2025-07-13 11:38:41] 2025-07-13 09:38:03,713 | INFO     | intersect: 8518381632.791061
[2025-07-13 11:38:41] 2025-07-13 09:38:03,713 | INFO     | chi2: 0.8989329532202239
[2025-07-13 11:38:41] 2025-07-13 09:38:03,713 | INFO     | current chi2=0.8989329532202239 (change=61.18536021171366 %)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,714 | INFO     | sum of square deviations: 6239923508.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,723 | INFO     | sum of deviations: -27137769365.000004
[2025-07-13 11:38:41] 2025-07-13 09:38:03,723 | INFO     | mean x: 1752391107.5
[2025-07-13 11:38:41] 2025-07-13 09:38:03,723 | INFO     | mean y: 2551585.904411765
[2025-07-13 11:38:41] 2025-07-13 09:38:03,723 | INFO     | -- intersect: 7623796566.174116
[2025-07-13 11:38:41] 2025-07-13 09:38:03,723 | INFO     | intersect: 7623796566.174116
[2025-07-13 11:38:41] 2025-07-13 09:38:03,724 | INFO     | chi2: 0.8813521331629967
[2025-07-13 11:38:41] 2025-07-13 09:38:03,724 | INFO     | current chi2=0.8813521331629967 (change=1.9557431946674069 %)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,724 | INFO     | left removable region: 20
[2025-07-13 11:38:41] 2025-07-13 09:38:03,724 | INFO     | sum of square deviations: 4903347750.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,726 | INFO     | sum of deviations: 9187412398.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,726 | INFO     | mean x: 1752391077.0
[2025-07-13 11:38:41] 2025-07-13 09:38:03,726 | INFO     | mean y: 2550455.298804781
[2025-07-13 11:38:41] 2025-07-13 09:38:03,726 | INFO     | -- intersect: -3280908179.054505
[2025-07-13 11:38:41] 2025-07-13 09:38:03,726 | INFO     | intersect: -3280908179.054505
[2025-07-13 11:38:41] 2025-07-13 09:38:03,727 | INFO     | chi2: 0.013122087315196459
[2025-07-13 11:38:41] 2025-07-13 09:38:03,727 | INFO     | -- intersect: -3280908179.054505
[2025-07-13 11:38:41] 2025-07-13 09:38:03,727 | INFO     | current memory leak: 1.87 B/s (using 251 data points, chi2=0.01)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | ..............................
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . Timing measurements:
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . get job = 0 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . initial setup = 2 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . payload setup = 14 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . stage-in = 0 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . payload execution = 17163 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . stage-out = 3 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | . log creation = 1 s
[2025-07-13 11:38:41] 2025-07-13 09:38:03,728 | INFO     | ..............................
[2025-07-13 11:38:41] 2025-07-13 09:38:04,010 | INFO     | 
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | job summary report
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | --------------------------------------------------
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | PanDA job id: 6720423008
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | task id: 45482148
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | errors: (none)
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | pilot state: finished 
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | transexitcode: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | exeerrorcode: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | exeerrordiag: 
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | exitcode: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | exitmsg: OK
[2025-07-13 11:38:41] 2025-07-13 09:38:04,011 | INFO     | cpuconsumptiontime: 63557 s
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | nevents: 400
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | neventsw: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | pid: 13230
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | pgrp: 13230
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | corecount: 8
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | event service: False
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | sizes: {0: 2393573, 5: 2393835, 11: 2393891, 17181: 2425426, 17185: 2434426, 17188: 2434482, 17281: 2434804}
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | --------------------------------------------------
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | 
[2025-07-13 11:38:41] 2025-07-13 09:38:04,012 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-13 11:38:41] 2025-07-13 09:38:04,475 | INFO     | job 6720423008 has completed (purged errors)
[2025-07-13 11:38:41] 2025-07-13 09:38:04,475 | INFO     | overall cleanup function is called
[2025-07-13 11:38:41] 2025-07-13 09:38:05,482 | INFO     | --- collectZombieJob: --- 10, [13230]
[2025-07-13 11:38:41] 2025-07-13 09:38:05,483 | INFO     | zombie collector waiting for pid 13230
[2025-07-13 11:38:41] 2025-07-13 09:38:05,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-13 11:38:41] 2025-07-13 09:38:05,483 | INFO     | collected zombie processes
[2025-07-13 11:38:41] 2025-07-13 09:38:05,483 | INFO     | will attempt to kill all subprocesses of pid=13230
[2025-07-13 11:38:41] 2025-07-13 09:38:05,590 | INFO     | process IDs to be killed: [13230] (in reverse order)
[2025-07-13 11:38:41] 2025-07-13 09:38:06,385 | WARNING  | found no corresponding commands to process id(s)
[2025-07-13 11:38:41] 2025-07-13 09:38:06,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-13 11:38:41] 2025-07-13 09:38:06,388 | INFO     | did not find any defunct processes belonging to 13230
[2025-07-13 11:38:41] 2025-07-13 09:38:06,390 | INFO     | did not find any defunct processes belonging to 13230
[2025-07-13 11:38:41] 2025-07-13 09:38:06,390 | INFO     | ready for new job
[2025-07-13 11:38:41] 2025-07-13 09:38:06,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | ***************************************
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | ***************************************
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | 
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | pilot is running in a VM
[2025-07-13 11:38:41] 2025-07-13 09:38:06,392 | INFO     | architecture information:
[2025-07-13 11:38:41] 2025-07-13 09:38:06,407 | INFO     | executing command: cat /etc/os-release
[2025-07-13 11:38:41] 2025-07-13 09:38:06,727 | INFO     | cat /etc/os-release:
[2025-07-13 11:38:41] NAME="CentOS Linux"
[2025-07-13 11:38:41] VERSION="7 (Core)"
[2025-07-13 11:38:41] ID="centos"
[2025-07-13 11:38:41] ID_LIKE="rhel fedora"
[2025-07-13 11:38:41] VERSION_ID="7"
[2025-07-13 11:38:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-13 11:38:41] ANSI_COLOR="0;31"
[2025-07-13 11:38:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-13 11:38:41] HOME_URL="https://www.centos.org/"
[2025-07-13 11:38:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-13 11:38:41] 
[2025-07-13 11:38:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-13 11:38:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-13 11:38:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-13 11:38:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-13 11:38:41] 
[2025-07-13 11:38:41] 2025-07-13 09:38:06,727 | INFO     | ***************************************
[2025-07-13 11:38:41] 2025-07-13 09:38:07,232 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-07-13 11:38:41] 2025-07-13 09:38:07,523 | INFO     | sufficient remaining disk space (497567137792 B)
[2025-07-13 11:38:41] 2025-07-13 09:38:07,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-13 11:38:41] 2025-07-13 09:38:07,524 | INFO     | current server update state: UPDATING_FINAL
[2025-07-13 11:38:41] 2025-07-13 09:38:07,524 | INFO     | update_server=False
[2025-07-13 11:38:41] 2025-07-13 09:38:07,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-13 11:38:41] 2025-07-13 09:38:07,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-13 11:38:41] 2025-07-13 09:38:07,825 | INFO     | all payload control threads have been joined
[2025-07-13 11:38:41] 2025-07-13 09:38:07,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-13 11:38:41] 2025-07-13 09:38:07,834 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-13 11:38:41] 2025-07-13 09:38:07,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-13 11:38:41] 2025-07-13 09:38:07,834 | INFO     | will abort loop
[2025-07-13 11:38:41] 2025-07-13 09:38:07,915 | INFO     | all data control threads have been joined
[2025-07-13 11:38:41] 2025-07-13 09:38:07,986 | INFO     | all job control threads have been joined
[2025-07-13 11:38:41] 2025-07-13 09:38:08,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-13 11:38:41] 2025-07-13 09:38:08,530 | INFO     | [job] retrieve thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:08,783 | INFO     | [data] copytool_in thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:08,834 | INFO     | [payload] control thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:08,839 | INFO     | [job] job monitor thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:08,921 | INFO     | [data] control thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:08,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-13 11:38:41] 2025-07-13 09:38:08,992 | INFO     | [job] control thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,030 | INFO     | [payload] validate_pre thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,104 | INFO     | [job] create_data_payload thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,246 | INFO     | [payload] validate_post thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,293 | INFO     | [job] validate thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,577 | INFO     | [payload] failed_post thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,871 | INFO     | [payload] execute_payloads thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:09,928 | INFO     | [job] queue monitor thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:10,506 | INFO     | [data] copytool_out thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:11,534 | INFO     | [data] queue_monitor thread has finished
[2025-07-13 11:38:41] 2025-07-13 09:38:12,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007606781760)>', '<ExcThread(monitor, started 140007176124160)>']
[2025-07-13 11:38:41] 2025-07-13 09:38:17,170 | INFO     | all workflow threads have been joined
[2025-07-13 11:38:41] 2025-07-13 09:38:17,171 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-13 11:38:41] 2025-07-13 09:38:17,171 | INFO     | traces error code: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:17,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-13 11:38:41] 2025-07-13 09:38:36,919 | INFO     | PID=6686 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-13 11:38:41] 2025-07-13 09:38:36,919 | INFO     | .. there are 9 such processes running
[2025-07-13 11:38:41] 2025-07-13 09:38:36,920 | INFO     | found 0 job(s) in 20 queues
[2025-07-13 11:38:41] 2025-07-13 09:38:36,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-13 11:38:41] 2025-07-13 09:38:36,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-13 11:38:41] 2025-07-13 09:38:36,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-13 11:38:41] 2025-07-13 09:38:36,920 | INFO     | [monitor] control thread has ended
[2025-07-13 11:38:41] 2025-07-13 09:38:37,078 [wrapper] ==== pilot stdout END ====
[2025-07-13 11:38:41] 2025-07-13 09:38:37,160 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-13 11:38:41] 2025-07-13 09:38:37,239 [wrapper] pilotpid: 6686
[2025-07-13 11:38:41] 2025-07-13 09:38:37,351 [wrapper] Pilot exit status: 0
[2025-07-13 11:38:41] 2025-07-13 09:38:37,857 [wrapper] pandaids: 6720423008
[2025-07-13 11:38:41] 2025-07-13 09:38:38,918 [wrapper] cleanup supervisor_pilot  7354 6687
[2025-07-13 11:38:41] 2025-07-13 09:38:38,961 [wrapper] Test setup, not cleaning
[2025-07-13 11:38:41] 2025-07-13 09:38:38,999 [wrapper] apfmon messages muted
[2025-07-13 11:38:41] 2025-07-13 09:38:39,037 [wrapper] ==== wrapper stdout END ====
[2025-07-13 11:38:41] 2025-07-13 09:38:39,074 [wrapper] ==== wrapper stderr END ====
[2025-07-13 11:38:41]  *** Error codes and diagnostics ***
[2025-07-13 11:38:41]     "exeErrorCode": 0,
[2025-07-13 11:38:41]     "exeErrorDiag": "",
[2025-07-13 11:38:41]     "pilotErrorCode": 0,
[2025-07-13 11:38:41]     "pilotErrorDiag": "",
[2025-07-13 11:38:41]  *** Listing of results directory ***
[2025-07-13 11:38:41] total 576020
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc    530466 Jul  4 20:31 pilot3.tar.gz
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc      5112 Jul  4 21:13 queuedata.json
[2025-07-13 11:38:41] -rwx------. 1 boinc boinc     36292 Jul  4 21:13 runpilot2-wrapper.sh
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc       100 Jul 13 04:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-13 11:38:41] -rwxr-xr-x. 1 boinc boinc      7986 Jul 13 04:26 run_atlas
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc       105 Jul 13 04:26 job.xml
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc 318193262 Jul 13 04:26 EVNT.45482146._000157.pool.root.1
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc     15095 Jul 13 04:26 start_atlas.sh
[2025-07-13 11:38:41] drwxrwx--x. 2 boinc boinc        68 Jul 13 04:26 shared
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc    542915 Jul 13 04:26 input.tar.gz
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc      6392 Jul 13 04:26 init_data.xml
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc         0 Jul 13 04:26 boinc_lockfile
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc      2615 Jul 13 06:49 pandaJob.out
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc    976550 Jul 13 06:49 agis_schedconf.cvmfs.json
[2025-07-13 11:38:41] drwx------. 4 boinc boinc      4096 Jul 13 06:49 pilot3
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc 263950400 Jul 13 11:35 HITS.45482148._003917.pool.root.1
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc       531 Jul 13 11:35 boinc_task_state.xml
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc      1015 Jul 13 11:36 memory_monitor_summary.json
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc   1588641 Jul 13 11:36 agis_ddmendpoints.agis.ALL.json
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc    416727 Jul 13 11:36 log.45482148._003917.job.log.tgz.1
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc      7767 Jul 13 11:38 heartbeat.json
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc       819 Jul 13 11:38 pilotlog.txt
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc        95 Jul 13 11:38 pilot_heartbeat.json
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc      8192 Jul 13 11:38 boinc_mmap_file
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc        28 Jul 13 11:38 wrapper_checkpoint.txt
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc   1506535 Jul 13 11:38 log.45482148._003917.job.log.1
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc       357 Jul 13 11:38 output.list
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc       620 Jul 13 11:38 runtime_log
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc   1945600 Jul 13 11:38 result.tar.gz
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc      8674 Jul 13 11:38 runtime_log.err
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc       656 Jul 13 11:38 8dgNDm010r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgt7KDmyIt8Dm.diag
[2025-07-13 11:38:41] -rw-r--r--. 1 boinc boinc     20580 Jul 13 11:38 stderr.txt
[2025-07-13 11:38:41] HITS file was successfully produced:
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc 263950400 Jul 13 11:35 shared/HITS.pool.root.1
[2025-07-13 11:38:41]  *** Contents of shared directory: ***
[2025-07-13 11:38:41] total 570952
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc 318193262 Jul 13 04:26 ATLAS.root_0
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc     15095 Jul 13 04:26 start_atlas.sh
[2025-07-13 11:38:41] -rw-r--r--. 2 boinc boinc    542915 Jul 13 04:26 input.tar.gz
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc 263950400 Jul 13 11:35 HITS.pool.root.1
[2025-07-13 11:38:41] -rw-------. 1 boinc boinc   1945600 Jul 13 11:38 result.tar.gz
11:38:43 (649): run_atlas exited; CPU time 63742.153165
11:38:43 (649): called boinc_finish(0)

</stderr_txt>
]]>

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