Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:03:25 (3129746): wrapper (7.7.26015): starting
16:03:25 (3129746): wrapper: running run_atlas (--nthreads 8)
[2025-07-12 16:03:25] Arguments: --nthreads 8
[2025-07-12 16:03:25] Threads: 8
[2025-07-12 16:03:25] Checking for CVMFS
[2025-07-12 16:03:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-12 16:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-12 16:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-12 16:03:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-12 16:03:26] 2.12.6.0 50199 6124 473152 148254 2 701 32393037 40960001 15400 16776704 0 33665402 99.419 59061035 25921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-12 16:03:26] CVMFS is ok
[2025-07-12 16:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-12 16:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-12 16:03:26] Further information can be found at the LHC@home message board.
[2025-07-12 16:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-12 16:03:26] Checking for apptainer binary...
[2025-07-12 16:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-12 16:03:26] Running /usr/bin/apptainer --version
[2025-07-12 16:03:26] apptainer version 1.4.1-1.el9
[2025-07-12 16:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-12 16:03:26] c7-2-17.aglt2.org
[2025-07-12 16:03:26] apptainer works
[2025-07-12 16:03:26] Set ATHENA_PROC_NUMBER=8
[2025-07-12 16:03:26] Set ATHENA_CORE_NUMBER=8
[2025-07-12 16:03:26] Starting ATLAS job with PandaID=6720453205
[2025-07-12 16:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 17:56:40]  *** The last 200 lines of the pilot log: ***
[2025-07-12 17:56:40] 2025-07-12 21:56:06,727 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6720453205/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,729 | INFO     | extracted standard info from prmon json
[2025-07-12 17:56:40] 2025-07-12 21:56:06,729 | INFO     | extracted standard memory fields from prmon json
[2025-07-12 17:56:40] 2025-07-12 21:56:06,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-12 17:56:40] 2025-07-12 21:56:06,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-12 17:56:40] 2025-07-12 21:56:06,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-12 17:56:40] 2025-07-12 21:56:06,731 | INFO     | fitting pss+swap vs Time
[2025-07-12 17:56:40] 2025-07-12 21:56:06,731 | INFO     | sum of square deviations: 412686807.5
[2025-07-12 17:56:40] 2025-07-12 21:56:06,732 | INFO     | sum of deviations: 20295286728.499996
[2025-07-12 17:56:40] 2025-07-12 21:56:06,732 | INFO     | mean x: 1752353978.5
[2025-07-12 17:56:40] 2025-07-12 21:56:06,732 | INFO     | mean y: 2175167.790909091
[2025-07-12 17:56:40] 2025-07-12 21:56:06,733 | INFO     | -- intersect: -86175831487.98332
[2025-07-12 17:56:40] 2025-07-12 21:56:06,733 | INFO     | intersect: -86175831487.98332
[2025-07-12 17:56:40] 2025-07-12 21:56:06,733 | INFO     | chi2: 1.58479065092282
[2025-07-12 17:56:40] 2025-07-12 21:56:06,733 | INFO     | sum of square deviations: 358927660.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | sum of deviations: 18899013594.999996
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | mean x: 1752353826.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | mean y: 2171203.9523809524
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | -- intersect: -92266445767.01123
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | intersect: -92266445767.01123
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | chi2: 1.5869394274493656
[2025-07-12 17:56:40] 2025-07-12 21:56:06,734 | INFO     | current chi2=1.5869394274493656 (change=-0.1355874055222575 %)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,735 | INFO     | right removable region: 104
[2025-07-12 17:56:40] 2025-07-12 21:56:06,735 | INFO     | sum of square deviations: 358927660.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,735 | INFO     | sum of deviations: 3735121744.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,735 | INFO     | mean x: 1752354131.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | mean y: 2221433.476190476
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | -- intersect: -18233364026.519634
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | intersect: -18233364026.519634
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | chi2: 0.06171266479351925
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | current chi2=0.06171266479351925 (change=96.10594214714831 %)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,736 | INFO     | sum of square deviations: 310052325.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | sum of deviations: 3967917294.5000005
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | mean x: 1752354283.5
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | mean y: 2220640.09
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | -- intersect: -22423661402.85487
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | intersect: -22423661402.85487
[2025-07-12 17:56:40] 2025-07-12 21:56:06,737 | INFO     | chi2: 0.054730288261826694
[2025-07-12 17:56:40] 2025-07-12 21:56:06,738 | INFO     | current chi2=0.054730288261826694 (change=11.314333216778884 %)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,738 | INFO     | left removable region: 20
[2025-07-12 17:56:40] 2025-07-12 21:56:06,738 | INFO     | sum of square deviations: 183761585.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,738 | INFO     | sum of deviations: 3938876201.0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | mean x: 1752354405.5
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | mean y: 2215369.904761905
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | -- intersect: -37558992341.3884
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | intersect: -37558992341.3884
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | chi2: 0.021160240213082503
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | -- intersect: -37558992341.3884
[2025-07-12 17:56:40] 2025-07-12 21:56:06,739 | INFO     | current memory leak: 21.43 B/s (using 84 data points, chi2=0.02)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | could have reported an average CPU frequency of 3111 MHz (7 samples)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | ..............................
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | . Timing measurements:
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | . get job = 0 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | . initial setup = 3 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,740 | INFO     | . payload setup = 11 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,741 | INFO     | . stage-in = 0 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,741 | INFO     | . payload execution = 6705 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,741 | INFO     | . stage-out = 0 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,741 | INFO     | . log creation = 0 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,741 | INFO     | ..............................
[2025-07-12 17:56:40] 2025-07-12 21:56:06,810 | INFO     | 
[2025-07-12 17:56:40] 2025-07-12 21:56:06,811 | INFO     | job summary report
[2025-07-12 17:56:40] 2025-07-12 21:56:06,811 | INFO     | --------------------------------------------------
[2025-07-12 17:56:40] 2025-07-12 21:56:06,811 | INFO     | PanDA job id: 6720453205
[2025-07-12 17:56:40] 2025-07-12 21:56:06,811 | INFO     | task id: 45482137
[2025-07-12 17:56:40] 2025-07-12 21:56:06,811 | INFO     | errors: (none)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | pilot state: finished 
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | transexitcode: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | exeerrorcode: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | exeerrordiag: 
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | exitcode: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | exitmsg: OK
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | cpuconsumptiontime: 44250 s
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | nevents: 400
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | neventsw: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,812 | INFO     | pid: 3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | pgrp: 3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | corecount: 8
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | event service: False
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | sizes: {0: 2393322, 1: 2393521, 6: 2393783, 11: 2393811, 6720: 2420857, 6722: 2429855, 6724: 2430039, 6730: 2430233}
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | --------------------------------------------------
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | 
[2025-07-12 17:56:40] 2025-07-12 21:56:06,813 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-12 17:56:40] 2025-07-12 21:56:06,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,831 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | job 6720453205 has completed (purged errors)
[2025-07-12 17:56:40] 2025-07-12 21:56:06,833 | INFO     | overall cleanup function is called
[2025-07-12 17:56:40] 2025-07-12 21:56:07,216 | INFO     | PID=3136012 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-12 17:56:40] 2025-07-12 21:56:07,216 | INFO     | .. there are 17 such processes running
[2025-07-12 17:56:40] 2025-07-12 21:56:07,841 | INFO     | --- collectZombieJob: --- 10, [3150481]
[2025-07-12 17:56:40] 2025-07-12 21:56:07,841 | INFO     | zombie collector waiting for pid 3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:07,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 17:56:40] 2025-07-12 21:56:07,841 | INFO     | collected zombie processes
[2025-07-12 17:56:40] 2025-07-12 21:56:07,842 | INFO     | will attempt to kill all subprocesses of pid=3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:08,276 | INFO     | process IDs to be killed: [3150481] (in reverse order)
[2025-07-12 17:56:40] 2025-07-12 21:56:08,405 | WARNING  | found no corresponding commands to process id(s)
[2025-07-12 17:56:40] 2025-07-12 21:56:08,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-12 17:56:40] 2025-07-12 21:56:08,422 | INFO     | did not find any defunct processes belonging to 3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:08,438 | INFO     | did not find any defunct processes belonging to 3150481
[2025-07-12 17:56:40] 2025-07-12 21:56:08,439 | INFO     | ready for new job
[2025-07-12 17:56:40] 2025-07-12 21:56:08,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-12 17:56:40] 2025-07-12 21:56:08,440 | INFO     | ***************************************
[2025-07-12 17:56:40] 2025-07-12 21:56:08,440 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-12 17:56:40] 2025-07-12 21:56:08,440 | INFO     | ***************************************
[2025-07-12 17:56:40] 2025-07-12 21:56:08,440 | INFO     | 
[2025-07-12 17:56:40] 2025-07-12 21:56:08,457 | INFO     | architecture information:
[2025-07-12 17:56:40] 2025-07-12 21:56:08,458 | INFO     | executing command: cat /etc/os-release
[2025-07-12 17:56:40] 2025-07-12 21:56:08,474 | INFO     | cat /etc/os-release:
[2025-07-12 17:56:40] NAME="CentOS Linux"
[2025-07-12 17:56:40] VERSION="7 (Core)"
[2025-07-12 17:56:40] ID="centos"
[2025-07-12 17:56:40] ID_LIKE="rhel fedora"
[2025-07-12 17:56:40] VERSION_ID="7"
[2025-07-12 17:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 17:56:40] ANSI_COLOR="0;31"
[2025-07-12 17:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 17:56:40] HOME_URL="https://www.centos.org/"
[2025-07-12 17:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 17:56:40] 
[2025-07-12 17:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 17:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 17:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 17:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 17:56:40] 
[2025-07-12 17:56:40] 2025-07-12 21:56:08,474 | INFO     | ***************************************
[2025-07-12 17:56:40] 2025-07-12 21:56:08,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-12 17:56:40] 2025-07-12 21:56:08,994 | INFO     | sufficient remaining disk space (129586167808 B)
[2025-07-12 17:56:40] 2025-07-12 21:56:08,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 17:56:40] 2025-07-12 21:56:08,994 | INFO     | current server update state: UPDATING_FINAL
[2025-07-12 17:56:40] 2025-07-12 21:56:08,995 | INFO     | update_server=False
[2025-07-12 17:56:40] 2025-07-12 21:56:08,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 17:56:40] 2025-07-12 21:56:09,378 | INFO     | all job control threads have been joined
[2025-07-12 17:56:40] 2025-07-12 21:56:09,467 | INFO     | all data control threads have been joined
[2025-07-12 17:56:40] 2025-07-12 21:56:09,472 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-12 17:56:40] 2025-07-12 21:56:09,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-12 17:56:40] 2025-07-12 21:56:09,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 17:56:40] 2025-07-12 21:56:09,472 | INFO     | will abort loop
[2025-07-12 17:56:40] 2025-07-12 21:56:09,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 17:56:40] 2025-07-12 21:56:09,999 | INFO     | [job] retrieve thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,094 | INFO     | all payload control threads have been joined
[2025-07-12 17:56:40] 2025-07-12 21:56:10,275 | INFO     | [payload] failed_post thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,305 | INFO     | [data] copytool_in thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,383 | INFO     | [job] control thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,425 | INFO     | [payload] execute_payloads thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,472 | INFO     | [data] control thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,474 | INFO     | [job] validate thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,477 | INFO     | [job] job monitor thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:10,609 | INFO     | [job] create_data_payload thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:11,049 | INFO     | [payload] validate_pre thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:11,099 | INFO     | [payload] control thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:11,296 | INFO     | [payload] validate_post thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:11,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 17:56:40] 2025-07-12 21:56:11,615 | INFO     | [data] copytool_out thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:11,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 17:56:40] 2025-07-12 21:56:12,825 | INFO     | [job] queue monitor thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:15,384 | INFO     | [data] queue_monitor thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:19,900 | INFO     | job.realtimelogging is not enabled
[2025-07-12 17:56:40] 2025-07-12 21:56:20,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-12 17:56:40] 2025-07-12 21:56:22,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871607424832)>', '<ExcThread(monitor, started 139871326799616)>']
[2025-07-12 17:56:40] 2025-07-12 21:56:27,784 | INFO     | all workflow threads have been joined
[2025-07-12 17:56:40] 2025-07-12 21:56:27,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-12 17:56:40] 2025-07-12 21:56:27,785 | INFO     | traces error code: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:27,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 17:56:40] 2025-07-12 21:56:39,762 | INFO     | PID=3136012 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-12 17:56:40] 2025-07-12 21:56:39,763 | INFO     | .. there are 17 such processes running
[2025-07-12 17:56:40] 2025-07-12 21:56:39,763 | INFO     | found 0 job(s) in 20 queues
[2025-07-12 17:56:40] 2025-07-12 21:56:39,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 17:56:40] 2025-07-12 21:56:39,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-12 17:56:40] 2025-07-12 21:56:39,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-12 17:56:40] 2025-07-12 21:56:39,764 | CRITICAL | thread 'MainThread' is not alive
[2025-07-12 17:56:40] 2025-07-12 21:56:39,764 | INFO     | [monitor] control thread has ended
[2025-07-12 17:56:40] 2025-07-12 21:56:39,937 [wrapper] ==== pilot stdout END ====
[2025-07-12 17:56:40] 2025-07-12 21:56:39,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 17:56:40] 2025-07-12 21:56:39,943 [wrapper] pilotpid: 3136012
[2025-07-12 17:56:40] 2025-07-12 21:56:39,945 [wrapper] Pilot exit status: 0
[2025-07-12 17:56:40] 2025-07-12 21:56:39,954 [wrapper] pandaids: 6720453205
[2025-07-12 17:56:40] 2025-07-12 21:56:40,044 [wrapper] cleanup supervisor_pilot  719418 3136013
[2025-07-12 17:56:40] 2025-07-12 21:56:40,046 [wrapper] Test setup, not cleaning
[2025-07-12 17:56:40] 2025-07-12 21:56:40,049 [wrapper] apfmon messages muted
[2025-07-12 17:56:40] 2025-07-12 21:56:40,051 [wrapper] ==== wrapper stdout END ====
[2025-07-12 17:56:40] 2025-07-12 21:56:40,053 [wrapper] ==== wrapper stderr END ====
[2025-07-12 17:56:40]  *** Error codes and diagnostics ***
[2025-07-12 17:56:40]     "exeErrorCode": 0,
[2025-07-12 17:56:40]     "exeErrorDiag": "",
[2025-07-12 17:56:40]     "pilotErrorCode": 0,
[2025-07-12 17:56:40]     "pilotErrorDiag": "",
[2025-07-12 17:56:40]  *** Listing of results directory ***
[2025-07-12 17:56:40] total 563268
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas    530466 Jul  4 14:31 pilot3.tar.gz
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas      5112 Jul  4 15:16 queuedata.json
[2025-07-12 17:56:40] -rwx------. 1 boincer umatlas     36292 Jul  4 15:19 runpilot2-wrapper.sh
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas       100 Jul 12 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 17:56:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 12 16:03 run_atlas
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas       105 Jul 12 16:03 job.xml
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas 314548186 Jul 12 16:03 EVNT.45482135._000026.pool.root.1
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 16:03 start_atlas.sh
[2025-07-12 17:56:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 12 16:03 shared
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas    542883 Jul 12 16:03 input.tar.gz
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas         0 Jul 12 16:03 boinc_lockfile
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas      2539 Jul 12 16:03 pandaJob.out
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas    976550 Jul 12 16:03 agis_schedconf.cvmfs.json
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas   1588641 Jul 12 16:03 agis_ddmendpoints.agis.ALL.json
[2025-07-12 17:56:40] drwx------. 4 boincer umatlas      4096 Jul 12 16:03 pilot3
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas      6932 Jul 12 17:48 init_data.xml
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas 256450105 Jul 12 17:55 HITS.45482137._000635.pool.root.1
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas       529 Jul 12 17:55 boinc_task_state.xml
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas      1037 Jul 12 17:55 memory_monitor_summary.json
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas    324509 Jul 12 17:55 log.45482137._000635.job.log.tgz.1
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas      7780 Jul 12 17:56 heartbeat.json
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas        27 Jul 12 17:56 wrapper_checkpoint.txt
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 12 17:56 boinc_mmap_file
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas       893 Jul 12 17:56 pilotlog.txt
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas        95 Jul 12 17:56 pilot_heartbeat.json
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas    634429 Jul 12 17:56 log.45482137._000635.job.log.1
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas       357 Jul 12 17:56 output.list
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas       620 Jul 12 17:56 runtime_log
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas    983040 Jul 12 17:56 result.tar.gz
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas       654 Jul 12 17:56 tCjNDmq70r7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfenKDmAtOuXo.diag
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas      8655 Jul 12 17:56 runtime_log.err
[2025-07-12 17:56:40] -rw-r--r--. 1 boincer umatlas     21160 Jul 12 17:56 stderr.txt
[2025-07-12 17:56:40] HITS file was successfully produced:
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas 256450105 Jul 12 17:55 shared/HITS.pool.root.1
[2025-07-12 17:56:40]  *** Contents of shared directory: ***
[2025-07-12 17:56:40] total 559132
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas 314548186 Jul 12 16:03 ATLAS.root_0
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 16:03 start_atlas.sh
[2025-07-12 17:56:40] -rw-r--r--. 2 boincer umatlas    542883 Jul 12 16:03 input.tar.gz
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas 256450105 Jul 12 17:55 HITS.pool.root.1
[2025-07-12 17:56:40] -rw-------. 1 boincer umatlas    983040 Jul 12 17:56 result.tar.gz
17:56:41 (3129746): run_atlas exited; CPU time 44478.995543
17:56:41 (3129746): called boinc_finish(0)

</stderr_txt>
]]>

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