Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:48:51 (30184): wrapper (7.7.26015): starting
14:48:51 (30184): wrapper: running run_atlas (--nthreads 8)
[2025-07-11 14:48:51] Arguments: --nthreads 8
[2025-07-11 14:48:51] Threads: 8
[2025-07-11 14:48:51] Checking for CVMFS
[2025-07-11 14:48:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 14:48:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 14:48:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 14:48:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 14:48:52] 2.11.2.0 2790 52191 92716 148215 3 1 18106841 20275201 1 130560 0 11589901 99.934 2679570 35038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-11 14:48:52] CVMFS is ok
[2025-07-11 14:48:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 14:48:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 14:48:52] Further information can be found at the LHC@home message board.
[2025-07-11 14:48:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 14:48:52] Checking for apptainer binary...
[2025-07-11 14:48:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 14:48:52] Running /usr/bin/apptainer --version
[2025-07-11 14:48:52] apptainer version 1.3.2-1.el7
[2025-07-11 14:48:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 14:48:54] c-204-4.aglt2.org
[2025-07-11 14:48:54] apptainer works
[2025-07-11 14:48:54] Set ATHENA_PROC_NUMBER=8
[2025-07-11 14:48:54] Set ATHENA_CORE_NUMBER=8
[2025-07-11 14:48:54] Starting ATLAS job with PandaID=6721000726
[2025-07-11 14:48:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 18:03:28]  *** The last 200 lines of the pilot log: ***
[2025-07-11 18:03:28] 2025-07-11 22:02:52,687 | INFO     | monitor loop #855: job 0:6721000726 is in state 'finished'
[2025-07-11 18:03:28] 2025-07-11 22:02:52,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 18:03:28] 2025-07-11 22:02:55,191 | INFO     | monitor loop #856: job 0:6721000726 is in state 'finished'
[2025-07-11 18:03:28] 2025-07-11 22:02:55,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,364 | INFO     | PID=1488 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-11 18:03:28] 2025-07-11 22:02:56,607 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-11 18:03:28] 2025-07-11 22:02:56,610 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-11 18:03:28] 2025-07-11 22:02:56,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721000726/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,612 | INFO     | extracted standard info from prmon json
[2025-07-11 18:03:28] 2025-07-11 22:02:56,612 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 18:03:28] 2025-07-11 22:02:56,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 18:03:28] 2025-07-11 22:02:56,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 18:03:28] 2025-07-11 22:02:56,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 18:03:28] 2025-07-11 22:02:56,617 | INFO     | fitting pss+swap vs Time
[2025-07-11 18:03:28] 2025-07-11 22:02:56,617 | INFO     | sum of square deviations: 2126802667.5
[2025-07-11 18:03:28] 2025-07-11 22:02:56,618 | INFO     | sum of deviations: 19371381216.499996
[2025-07-11 18:03:28] 2025-07-11 22:02:56,618 | INFO     | mean x: 1752265549.5
[2025-07-11 18:03:28] 2025-07-11 22:02:56,619 | INFO     | mean y: 2553859.889473684
[2025-07-11 18:03:28] 2025-07-11 22:02:56,619 | INFO     | -- intersect: -15957461834.375376
[2025-07-11 18:03:28] 2025-07-11 22:02:56,619 | INFO     | intersect: -15957461834.375376
[2025-07-11 18:03:28] 2025-07-11 22:02:56,619 | INFO     | chi2: 1.6351502188896279
[2025-07-11 18:03:28] 2025-07-11 22:02:56,620 | INFO     | sum of square deviations: 1963274020.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | sum of deviations: 18784475359.000004
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | mean x: 1752265397.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | mean y: 2553312.4
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | -- intersect: -16763005563.775042
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | intersect: -16763005563.775042
[2025-07-11 18:03:28] 2025-07-11 22:02:56,621 | INFO     | chi2: 1.6364341785712713
[2025-07-11 18:03:28] 2025-07-11 22:02:56,622 | INFO     | current chi2=1.6364341785712713 (change=-0.07852242973219309 %)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,622 | INFO     | right removable region: 184
[2025-07-11 18:03:28] 2025-07-11 22:02:56,622 | INFO     | sum of square deviations: 1963274020.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,623 | INFO     | sum of deviations: -11218651154.000002
[2025-07-11 18:03:28] 2025-07-11 22:02:56,623 | INFO     | mean x: 1752265702.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,623 | INFO     | mean y: 2582063.9891891894
[2025-07-11 18:03:28] 2025-07-11 22:02:56,623 | INFO     | -- intersect: 10015477584.22682
[2025-07-11 18:03:28] 2025-07-11 22:02:56,624 | INFO     | intersect: 10015477584.22682
[2025-07-11 18:03:28] 2025-07-11 22:02:56,624 | INFO     | chi2: 0.13982291666621602
[2025-07-11 18:03:28] 2025-07-11 22:02:56,624 | INFO     | current chi2=0.13982291666621602 (change=91.44892530050453 %)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,624 | INFO     | sum of square deviations: 1808350185.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,625 | INFO     | sum of deviations: -13966571894.999998
[2025-07-11 18:03:28] 2025-07-11 22:02:56,625 | INFO     | mean x: 1752265854.5
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | mean y: 2584734.066666667
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | -- intersect: 13535996149.084084
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | intersect: 13535996149.084084
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | chi2: 0.11565129862563307
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | current chi2=0.11565129862563307 (change=17.287307844024745 %)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,626 | INFO     | left removable region: 20
[2025-07-11 18:03:28] 2025-07-11 22:02:56,627 | INFO     | sum of square deviations: 1367709365.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,627 | INFO     | sum of deviations: -2617325353.0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | mean x: 1752265976.5
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | mean y: 2572415.56097561
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | -- intersect: 3355806869.3535414
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | intersect: 3355806869.3535414
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | chi2: 0.06437392229781658
[2025-07-11 18:03:28] 2025-07-11 22:02:56,628 | INFO     | -- intersect: 3355806869.3535414
[2025-07-11 18:03:28] 2025-07-11 22:02:56,629 | INFO     | current memory leak: -1.91 B/s (using 164 data points, chi2=0.06)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,629 | INFO     | could have reported an average CPU frequency of 2055 MHz (10 samples)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,629 | INFO     | ..............................
[2025-07-11 18:03:28] 2025-07-11 22:02:56,629 | INFO     | . Timing measurements:
[2025-07-11 18:03:28] 2025-07-11 22:02:56,629 | INFO     | . get job = 0 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . initial setup = 2 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . payload setup = 12 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . stage-in = 0 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . payload execution = 11581 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . stage-out = 2 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | . log creation = 0 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,630 | INFO     | ..............................
[2025-07-11 18:03:28] 2025-07-11 22:02:56,725 | INFO     | 
[2025-07-11 18:03:28] 2025-07-11 22:02:56,725 | INFO     | job summary report
[2025-07-11 18:03:28] 2025-07-11 22:02:56,726 | INFO     | --------------------------------------------------
[2025-07-11 18:03:28] 2025-07-11 22:02:56,726 | INFO     | PanDA job id: 6721000726
[2025-07-11 18:03:28] 2025-07-11 22:02:56,726 | INFO     | task id: 45482148
[2025-07-11 18:03:28] 2025-07-11 22:02:56,726 | INFO     | errors: (none)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | pilot state: finished 
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | transexitcode: 0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | exeerrorcode: 0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | exeerrordiag: 
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | exitcode: 0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,727 | INFO     | exitmsg: OK
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | cpuconsumptiontime: 86382 s
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | nevents: 400
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | neventsw: 0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | pid: 8121
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | pgrp: 8121
[2025-07-11 18:03:28] 2025-07-11 22:02:56,728 | INFO     | corecount: 8
[2025-07-11 18:03:28] 2025-07-11 22:02:56,729 | INFO     | event service: False
[2025-07-11 18:03:28] 2025-07-11 22:02:56,729 | INFO     | sizes: {0: 2393405, 1: 2393604, 7: 2393866, 11: 2393894, 11597: 2423262, 11600: 2432260, 11601: 2432444, 11609: 2432638}
[2025-07-11 18:03:28] 2025-07-11 22:02:56,729 | INFO     | --------------------------------------------------
[2025-07-11 18:03:28] 2025-07-11 22:02:56,729 | INFO     | 
[2025-07-11 18:03:28] 2025-07-11 22:02:56,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-11 18:03:28] 2025-07-11 22:02:56,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 18:03:28] 2025-07-11 22:02:56,763 | INFO     | job 6721000726 has completed (purged errors)
[2025-07-11 18:03:28] 2025-07-11 22:02:56,763 | INFO     | overall cleanup function is called
[2025-07-11 18:03:28] 2025-07-11 22:02:57,771 | INFO     | --- collectZombieJob: --- 10, [8121]
[2025-07-11 18:03:28] 2025-07-11 22:02:57,772 | INFO     | zombie collector waiting for pid 8121
[2025-07-11 18:03:28] 2025-07-11 22:02:57,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 18:03:28] 2025-07-11 22:02:57,772 | INFO     | collected zombie processes
[2025-07-11 18:03:28] 2025-07-11 22:02:57,772 | INFO     | will attempt to kill all subprocesses of pid=8121
[2025-07-11 18:03:28] 2025-07-11 22:02:57,860 | INFO     | process IDs to be killed: [8121] (in reverse order)
[2025-07-11 18:03:28] 2025-07-11 22:02:57,917 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 18:03:28] 2025-07-11 22:02:57,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 18:03:28] 2025-07-11 22:02:57,922 | INFO     | did not find any defunct processes belonging to 8121
[2025-07-11 18:03:28] 2025-07-11 22:02:57,925 | INFO     | did not find any defunct processes belonging to 8121
[2025-07-11 18:03:28] 2025-07-11 22:02:57,926 | INFO     | ready for new job
[2025-07-11 18:03:28] 2025-07-11 22:02:57,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 18:03:28] 2025-07-11 22:02:57,928 | INFO     | ***************************************
[2025-07-11 18:03:28] 2025-07-11 22:02:57,928 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 18:03:28] 2025-07-11 22:02:57,928 | INFO     | ***************************************
[2025-07-11 18:03:28] 2025-07-11 22:02:57,928 | INFO     | 
[2025-07-11 18:03:28] 2025-07-11 22:02:57,929 | INFO     | architecture information:
[2025-07-11 18:03:28] 2025-07-11 22:02:57,929 | INFO     | executing command: cat /etc/os-release
[2025-07-11 18:03:28] 2025-07-11 22:02:57,946 | INFO     | cat /etc/os-release:
[2025-07-11 18:03:28] NAME="CentOS Linux"
[2025-07-11 18:03:28] VERSION="7 (Core)"
[2025-07-11 18:03:28] ID="centos"
[2025-07-11 18:03:28] ID_LIKE="rhel fedora"
[2025-07-11 18:03:28] VERSION_ID="7"
[2025-07-11 18:03:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 18:03:28] ANSI_COLOR="0;31"
[2025-07-11 18:03:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 18:03:28] HOME_URL="https://www.centos.org/"
[2025-07-11 18:03:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 18:03:28] 
[2025-07-11 18:03:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 18:03:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 18:03:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 18:03:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 18:03:28] 
[2025-07-11 18:03:28] 2025-07-11 22:02:57,947 | INFO     | ***************************************
[2025-07-11 18:03:28] 2025-07-11 22:02:58,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-11 18:03:28] 2025-07-11 22:02:58,468 | INFO     | sufficient remaining disk space (18337497088 B)
[2025-07-11 18:03:28] 2025-07-11 22:02:58,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 18:03:28] 2025-07-11 22:02:58,469 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 18:03:28] 2025-07-11 22:02:58,469 | INFO     | update_server=False
[2025-07-11 18:03:28] 2025-07-11 22:02:58,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 18:03:28] 2025-07-11 22:02:58,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 18:03:28] 2025-07-11 22:02:58,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 18:03:28] 2025-07-11 22:02:58,689 | INFO     | all job control threads have been joined
[2025-07-11 18:03:28] 2025-07-11 22:02:58,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 18:03:28] 2025-07-11 22:02:58,696 | INFO     | aborting loop
[2025-07-11 18:03:28] 2025-07-11 22:02:58,743 | INFO     | all data control threads have been joined
[2025-07-11 18:03:28] 2025-07-11 22:02:59,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 18:03:28] 2025-07-11 22:02:59,475 | INFO     | [job] retrieve thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,476 | INFO     | [job] queue monitor thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,506 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,679 | INFO     | all payload control threads have been joined
[2025-07-11 18:03:28] 2025-07-11 22:02:59,693 | INFO     | [job] control thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,701 | INFO     | [job] job monitor thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,748 | INFO     | [data] control thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,785 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:02:59,943 | INFO     | [data] copytool_in thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,434 | INFO     | [payload] failed_post thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,474 | INFO     | [data] copytool_out thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,500 | INFO     | [job] validate thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,685 | INFO     | [payload] control thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,759 | INFO     | [payload] validate_post thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:00,972 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:03,004 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 18:03:28] 2025-07-11 22:03:05,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853420533568)>', '<ExcThread(monitor, started 139852850915072)>']
[2025-07-11 18:03:28] 2025-07-11 22:03:10,071 | INFO     | all workflow threads have been joined
[2025-07-11 18:03:28] 2025-07-11 22:03:10,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 18:03:28] 2025-07-11 22:03:10,077 | INFO     | traces error code: 0
[2025-07-11 18:03:28] 2025-07-11 22:03:10,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 18:03:28] 2025-07-11 22:03:28,560 | INFO     | PID=1488 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-11 18:03:28] 2025-07-11 22:03:28,561 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 18:03:28] 2025-07-11 22:03:28,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 18:03:28] 2025-07-11 22:03:28,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 18:03:28] 2025-07-11 22:03:28,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 18:03:28] 2025-07-11 22:03:28,561 | INFO     | [monitor] control thread has ended
[2025-07-11 18:03:28] 2025-07-11 22:03:28,674 [wrapper] ==== pilot stdout END ====
[2025-07-11 18:03:28] 2025-07-11 22:03:28,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 18:03:28] 2025-07-11 22:03:28,683 [wrapper] pilotpid: 1488
[2025-07-11 18:03:28] 2025-07-11 22:03:28,687 [wrapper] Pilot exit status: 0
[2025-07-11 18:03:28] 2025-07-11 22:03:28,707 [wrapper] pandaids: 6721000726
[2025-07-11 18:03:28] 2025-07-11 22:03:28,752 [wrapper] cleanup supervisor_pilot 25336 1489
[2025-07-11 18:03:28] 2025-07-11 22:03:28,757 [wrapper] Test setup, not cleaning
[2025-07-11 18:03:28] 2025-07-11 22:03:28,762 [wrapper] apfmon messages muted
[2025-07-11 18:03:28] 2025-07-11 22:03:28,766 [wrapper] ==== wrapper stdout END ====
[2025-07-11 18:03:28] 2025-07-11 22:03:28,771 [wrapper] ==== wrapper stderr END ====
[2025-07-11 18:03:28]  *** Error codes and diagnostics ***
[2025-07-11 18:03:28]     "exeErrorCode": 0,
[2025-07-11 18:03:28]     "exeErrorDiag": "",
[2025-07-11 18:03:28]     "pilotErrorCode": 0,
[2025-07-11 18:03:28]     "pilotErrorDiag": "",
[2025-07-11 18:03:28]  *** Listing of results directory ***
[2025-07-11 18:03:28] total 581172
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas    530466 Jul  6 16:09 pilot3.tar.gz
[2025-07-11 18:03:28] -rwx------ 1 boincer umatlas     36292 Jul  6 16:24 runpilot2-wrapper.sh
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas      5112 Jul  6 16:24 queuedata.json
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas       100 Jul 11 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 18:03:28] -rwxr-xr-x 1 boincer umatlas      7986 Jul 11 14:48 run_atlas
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas       105 Jul 11 14:48 job.xml
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas 318843553 Jul 11 14:48 EVNT.45482146._000488.pool.root.1
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 14:48 start_atlas.sh
[2025-07-11 18:03:28] drwxrwx--x 2 boincer umatlas      4096 Jul 11 14:48 shared
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas    542911 Jul 11 14:48 input.tar.gz
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas         0 Jul 11 14:48 boinc_lockfile
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas      2617 Jul 11 14:48 pandaJob.out
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas    976223 Jul 11 14:49 agis_schedconf.cvmfs.json
[2025-07-11 18:03:28] drwx------ 4 boincer umatlas      4096 Jul 11 14:49 pilot3
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas      5825 Jul 11 18:01 init_data.xml
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas 269584684 Jul 11 18:02 HITS.45482148._012223.pool.root.1
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas       530 Jul 11 18:02 boinc_task_state.xml
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas      1050 Jul 11 18:02 memory_monitor_summary.json
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas   1588641 Jul 11 18:02 agis_ddmendpoints.agis.ALL.json
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas    375552 Jul 11 18:02 log.45482148._012223.job.log.tgz.1
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas        95 Jul 11 18:02 pilot_heartbeat.json
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas      7856 Jul 11 18:02 heartbeat.json
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas      8192 Jul 11 18:03 boinc_mmap_file
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas        28 Jul 11 18:03 wrapper_checkpoint.txt
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas       744 Jul 11 18:03 pilotlog.txt
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas   1038231 Jul 11 18:03 log.45482148._012223.job.log.1
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas       357 Jul 11 18:03 output.list
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas       620 Jul 11 18:03 runtime_log
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas   1433600 Jul 11 18:03 result.tar.gz
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas       662 Jul 11 18:03 vYtNDm75ks7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0DrKDmENkQnm.diag
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas      8656 Jul 11 18:03 runtime_log.err
[2025-07-11 18:03:28] -rw-r--r-- 1 boincer umatlas     21256 Jul 11 18:03 stderr.txt
[2025-07-11 18:03:28] HITS file was successfully produced:
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas 269584684 Jul 11 18:02 shared/HITS.pool.root.1
[2025-07-11 18:03:28]  *** Contents of shared directory: ***
[2025-07-11 18:03:28] total 576592
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas 318843553 Jul 11 14:48 ATLAS.root_0
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 14:48 start_atlas.sh
[2025-07-11 18:03:28] -rw-r--r-- 2 boincer umatlas    542911 Jul 11 14:48 input.tar.gz
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas 269584684 Jul 11 18:02 HITS.pool.root.1
[2025-07-11 18:03:28] -rw------- 1 boincer umatlas   1433600 Jul 11 18:03 result.tar.gz
18:03:30 (30184): run_atlas exited; CPU time 86290.135473
18:03:30 (30184): called boinc_finish(0)

</stderr_txt>
]]>

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