Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:23 (21008): wrapper (7.7.26015): starting
06:37:23 (21008): wrapper: running run_atlas (--nthreads 12)
[2025-07-11 06:37:23] Arguments: --nthreads 12
[2025-07-11 06:37:23] Threads: 12
[2025-07-11 06:37:23] Checking for CVMFS
[2025-07-11 06:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 06:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 06:37:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 06:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 06:37:23] 2.11.2.0 3255 88806 102120 148192 0 1 14555175 20275201 1 130560 0 32318911 99.971 8396739 9812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-11 06:37:23] CVMFS is ok
[2025-07-11 06:37:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 06:37:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 06:37:23] Further information can be found at the LHC@home message board.
[2025-07-11 06:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 06:37:23] Checking for apptainer binary...
[2025-07-11 06:37:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 06:37:23] Running /usr/bin/apptainer --version
[2025-07-11 06:37:23] apptainer version 1.3.2-1.el7
[2025-07-11 06:37:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 06:37:25] c-115-41.aglt2.org
[2025-07-11 06:37:25] apptainer works
[2025-07-11 06:37:25] Set ATHENA_PROC_NUMBER=12
[2025-07-11 06:37:25] Set ATHENA_CORE_NUMBER=12
[2025-07-11 06:37:25] Starting ATLAS job with PandaID=6721432637
[2025-07-11 06:37:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 08:13:26]  *** The last 200 lines of the pilot log: ***
[2025-07-11 08:13:26]  is_altstaged=None
[2025-07-11 08:13:26]  is_tar=False
[2025-07-11 08:13:26]  lfn=log.45482148._015028.job.log.tgz.1
[2025-07-11 08:13:26]  mtime=0
[2025-07-11 08:13:26]  protocol_id=None
[2025-07-11 08:13:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-11 08:13:26]  replicas=None
[2025-07-11 08:13:26]  scope=mc23_13p6TeV
[2025-07-11 08:13:26]  status=None
[2025-07-11 08:13:26]  status_code=0
[2025-07-11 08:13:26]  storage_token=
[2025-07-11 08:13:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6721432637/log.45482148._015028.job.log.tgz.1
[2025-07-11 08:13:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/3a/log.45482148._015028.job.log.tgz.1
[2025-07-11 08:13:26]  workdir=None
[2025-07-11 08:13:26] ]
[2025-07-11 08:13:26] 2025-07-11 12:12:58,682 | INFO     | transferring file log.45482148._015028.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6721432637/log.45482148._015028.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-11 08:13:26] 2025-07-11 12:12:58,683 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6721432637/log.45482148._015028.job.log.tgz.1 /tmp/boinchome/slots/0/log.45482148._015028.job
[2025-07-11 08:13:26] 2025-07-11 12:12:58,707 | INFO     | adding to output.list: log.45482148._015028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/3a/log.45482148._015028.job.log.tg
[2025-07-11 08:13:26] 2025-07-11 12:12:58,708 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-11 08:13:26] 2025-07-11 12:12:58,708 | INFO     | summary of transferred files:
[2025-07-11 08:13:26] 2025-07-11 12:12:58,708 | INFO     |  -- lfn=log.45482148._015028.job.log.tgz.1, status_code=0, status=transferred
[2025-07-11 08:13:26] 2025-07-11 12:12:58,709 | INFO     | stage-out finished correctly
[2025-07-11 08:13:26] 2025-07-11 12:12:59,822 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-11 08:13:26] 2025-07-11 12:13:00,884 | INFO     | job 6721432637 has state=finished
[2025-07-11 08:13:26] 2025-07-11 12:13:00,884 | INFO     | preparing for final server update for job 6721432637 in state='finished'
[2025-07-11 08:13:26] 2025-07-11 12:13:00,888 | INFO     | this job has now completed (state=finished)
[2025-07-11 08:13:26] 2025-07-11 12:13:00,888 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-11 08:13:26] 2025-07-11 12:13:00,889 | INFO     | log transfer has been attempted: DONE
[2025-07-11 08:13:26] 2025-07-11 12:13:00,889 | INFO     | job 6721432637 has finished - writing final server update
[2025-07-11 08:13:26] 2025-07-11 12:13:00,889 | INFO     | total number of processed events: 400 (read)
[2025-07-11 08:13:26] 2025-07-11 12:13:00,890 | INFO     | executing command: lscpu
[2025-07-11 08:13:26] 2025-07-11 12:13:00,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-11 08:13:26] 2025-07-11 12:13:00,960 | INFO     | monitor loop #429: job 0:6721432637 is in state 'finished'
[2025-07-11 08:13:26] 2025-07-11 12:13:00,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 08:13:26] 2025-07-11 12:13:03,462 | INFO     | monitor loop #430: job 0:6721432637 is in state 'finished'
[2025-07-11 08:13:26] 2025-07-11 12:13:03,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,545 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-11 08:13:26] 2025-07-11 12:13:05,549 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,551 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721432637/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,552 | INFO     | extracted standard info from prmon json
[2025-07-11 08:13:26] 2025-07-11 12:13:05,552 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 08:13:26] 2025-07-11 12:13:05,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 08:13:26] 2025-07-11 12:13:05,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 08:13:26] 2025-07-11 12:13:05,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 08:13:26] 2025-07-11 12:13:05,555 | INFO     | fitting pss+swap vs Time
[2025-07-11 08:13:26] 2025-07-11 12:13:05,555 | INFO     | sum of square deviations: 204163828.0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,555 | INFO     | sum of deviations: -7228672630.0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,555 | INFO     | mean x: 1752233218.0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,555 | INFO     | mean y: 2830795.091954023
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | -- intersect: 62042813236.709496
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | intersect: 62042813236.709496
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | chi2: 0.12250845516212233
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | -- intersect: 62042813236.709496
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | current memory leak: -35.41 B/s (using 87 data points, chi2=0.12)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,556 | INFO     | could have reported an average CPU frequency of 2253 MHz (7 samples)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | ..............................
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . Timing measurements:
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . get job = 0 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . initial setup = 2 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . payload setup = 9 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . stage-in = 0 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . payload execution = 5688 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . stage-out = 0 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | . log creation = 0 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,557 | INFO     | ..............................
[2025-07-11 08:13:26] 2025-07-11 12:13:05,633 | INFO     | 
[2025-07-11 08:13:26] 2025-07-11 12:13:05,634 | INFO     | job summary report
[2025-07-11 08:13:26] 2025-07-11 12:13:05,634 | INFO     | --------------------------------------------------
[2025-07-11 08:13:26] 2025-07-11 12:13:05,634 | INFO     | PanDA job id: 6721432637
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | task id: 45482148
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | errors: (none)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | pilot state: finished 
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | transexitcode: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,635 | INFO     | exeerrorcode: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | exeerrordiag: 
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | exitcode: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | exitmsg: OK
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | cpuconsumptiontime: 62313 s
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | nevents: 400
[2025-07-11 08:13:26] 2025-07-11 12:13:05,636 | INFO     | neventsw: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | pid: 31176
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | pgrp: 31176
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | corecount: 12
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | event service: False
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | sizes: {0: 2393349, 1: 2393604, 6: 2393866, 12: 2393894, 5702: 2420579, 5704: 2429577, 5705: 2429761, 5711: 2429955}
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | --------------------------------------------------
[2025-07-11 08:13:26] 2025-07-11 12:13:05,637 | INFO     | 
[2025-07-11 08:13:26] 2025-07-11 12:13:05,638 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-11 08:13:26] 2025-07-11 12:13:05,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 08:13:26] 2025-07-11 12:13:05,666 | INFO     | job 6721432637 has completed (purged errors)
[2025-07-11 08:13:26] 2025-07-11 12:13:05,667 | INFO     | overall cleanup function is called
[2025-07-11 08:13:26] 2025-07-11 12:13:06,675 | INFO     | --- collectZombieJob: --- 10, [31176]
[2025-07-11 08:13:26] 2025-07-11 12:13:06,675 | INFO     | zombie collector waiting for pid 31176
[2025-07-11 08:13:26] 2025-07-11 12:13:06,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 08:13:26] 2025-07-11 12:13:06,675 | INFO     | collected zombie processes
[2025-07-11 08:13:26] 2025-07-11 12:13:06,676 | INFO     | will attempt to kill all subprocesses of pid=31176
[2025-07-11 08:13:26] 2025-07-11 12:13:06,854 | INFO     | PID=24696 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-11 08:13:26] 2025-07-11 12:13:06,861 | INFO     | process IDs to be killed: [31176] (in reverse order)
[2025-07-11 08:13:26] 2025-07-11 12:13:06,939 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 08:13:26] 2025-07-11 12:13:06,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 08:13:26] 2025-07-11 12:13:06,943 | INFO     | did not find any defunct processes belonging to 31176
[2025-07-11 08:13:26] 2025-07-11 12:13:06,945 | INFO     | did not find any defunct processes belonging to 31176
[2025-07-11 08:13:26] 2025-07-11 12:13:06,945 | INFO     | ready for new job
[2025-07-11 08:13:26] 2025-07-11 12:13:06,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 08:13:26] 2025-07-11 12:13:06,946 | INFO     | ***************************************
[2025-07-11 08:13:26] 2025-07-11 12:13:06,946 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 08:13:26] 2025-07-11 12:13:06,946 | INFO     | ***************************************
[2025-07-11 08:13:26] 2025-07-11 12:13:06,946 | INFO     | 
[2025-07-11 08:13:26] 2025-07-11 12:13:06,947 | INFO     | architecture information:
[2025-07-11 08:13:26] 2025-07-11 12:13:06,947 | INFO     | executing command: cat /etc/os-release
[2025-07-11 08:13:26] 2025-07-11 12:13:06,962 | INFO     | cat /etc/os-release:
[2025-07-11 08:13:26] NAME="CentOS Linux"
[2025-07-11 08:13:26] VERSION="7 (Core)"
[2025-07-11 08:13:26] ID="centos"
[2025-07-11 08:13:26] ID_LIKE="rhel fedora"
[2025-07-11 08:13:26] VERSION_ID="7"
[2025-07-11 08:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 08:13:26] ANSI_COLOR="0;31"
[2025-07-11 08:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 08:13:26] HOME_URL="https://www.centos.org/"
[2025-07-11 08:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 08:13:26] 
[2025-07-11 08:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 08:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 08:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 08:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 08:13:26] 
[2025-07-11 08:13:26] 2025-07-11 12:13:06,963 | INFO     | ***************************************
[2025-07-11 08:13:26] 2025-07-11 12:13:07,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-11 08:13:26] 2025-07-11 12:13:07,483 | INFO     | sufficient remaining disk space (18336448512 B)
[2025-07-11 08:13:26] 2025-07-11 12:13:07,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 08:13:26] 2025-07-11 12:13:07,483 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 08:13:26] 2025-07-11 12:13:07,484 | INFO     | update_server=False
[2025-07-11 08:13:26] 2025-07-11 12:13:07,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 08:13:26] 2025-07-11 12:13:07,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 08:13:26] 2025-07-11 12:13:07,484 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-11 08:13:26] 2025-07-11 12:13:07,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 08:13:26] 2025-07-11 12:13:07,485 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 08:13:26] 2025-07-11 12:13:07,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 08:13:26] 2025-07-11 12:13:07,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 08:13:26] 2025-07-11 12:13:07,486 | INFO     | aborting loop
[2025-07-11 08:13:26] 2025-07-11 12:13:07,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 08:13:26] 2025-07-11 12:13:07,520 | INFO     | all payload control threads have been joined
[2025-07-11 08:13:26] 2025-07-11 12:13:07,836 | INFO     | all job control threads have been joined
[2025-07-11 08:13:26] 2025-07-11 12:13:08,489 | INFO     | [job] retrieve thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:08,490 | INFO     | [job] queue monitor thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:08,491 | INFO     | [job] job monitor thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:08,525 | INFO     | [payload] control thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:08,533 | INFO     | all data control threads have been joined
[2025-07-11 08:13:26] 2025-07-11 12:13:08,832 | INFO     | [job] validate thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:08,842 | INFO     | [job] control thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,128 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,128 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,243 | INFO     | [payload] validate_post thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,401 | INFO     | [payload] failed_post thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,491 | INFO     | [data] copytool_out thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,524 | INFO     | [data] copytool_in thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,539 | INFO     | [data] control thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:09,955 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:10,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 08:13:26] 2025-07-11 12:13:14,413 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:18,143 | INFO     | job.realtimelogging is not enabled
[2025-07-11 08:13:26] 2025-07-11 12:13:19,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 08:13:26] 2025-07-11 12:13:20,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379461719872)>', '<ExcThread(monitor, started 140378489468672)>']
[2025-07-11 08:13:26] 2025-07-11 12:13:21,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 08:13:26] 2025-07-11 12:13:21,558 | INFO     | [monitor] control thread has ended
[2025-07-11 08:13:26] 2025-07-11 12:13:26,021 | INFO     | all workflow threads have been joined
[2025-07-11 08:13:26] 2025-07-11 12:13:26,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 08:13:26] 2025-07-11 12:13:26,027 | INFO     | traces error code: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:26,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 08:13:26] 2025-07-11 12:13:26,112 [wrapper] ==== pilot stdout END ====
[2025-07-11 08:13:26] 2025-07-11 12:13:26,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 08:13:26] 2025-07-11 12:13:26,120 [wrapper] pilotpid: 24696
[2025-07-11 08:13:26] 2025-07-11 12:13:26,123 [wrapper] Pilot exit status: 0
[2025-07-11 08:13:26] 2025-07-11 12:13:26,140 [wrapper] pandaids: 6721432637
[2025-07-11 08:13:26] 2025-07-11 12:13:26,180 [wrapper] cleanup supervisor_pilot  6881 24697
[2025-07-11 08:13:26] 2025-07-11 12:13:26,184 [wrapper] Test setup, not cleaning
[2025-07-11 08:13:26] 2025-07-11 12:13:26,187 [wrapper] apfmon messages muted
[2025-07-11 08:13:26] 2025-07-11 12:13:26,190 [wrapper] ==== wrapper stdout END ====
[2025-07-11 08:13:26] 2025-07-11 12:13:26,194 [wrapper] ==== wrapper stderr END ====
[2025-07-11 08:13:26]  *** Error codes and diagnostics ***
[2025-07-11 08:13:26]     "exeErrorCode": 0,
[2025-07-11 08:13:26]     "exeErrorDiag": "",
[2025-07-11 08:13:26]     "pilotErrorCode": 0,
[2025-07-11 08:13:26]     "pilotErrorDiag": "",
[2025-07-11 08:13:26]  *** Listing of results directory ***
[2025-07-11 08:13:26] total 579516
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas    530466 Jul  7 03:10 pilot3.tar.gz
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas      5112 Jul  7 03:11 queuedata.json
[2025-07-11 08:13:26] -rwx------ 1 boincer umatlas     36292 Jul  7 03:15 runpilot2-wrapper.sh
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas       100 Jul 11 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 08:13:26] -rwxr-xr-x 1 boincer umatlas      7986 Jul 11 06:37 run_atlas
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas       105 Jul 11 06:37 job.xml
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas 318039271 Jul 11 06:37 EVNT.45482146._000599.pool.root.1
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 06:37 start_atlas.sh
[2025-07-11 08:13:26] drwxrwx--x 2 boincer umatlas      4096 Jul 11 06:37 shared
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas    542912 Jul 11 06:37 input.tar.gz
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas         0 Jul 11 06:37 boinc_lockfile
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas      2617 Jul 11 06:37 pandaJob.out
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas    976947 Jul 11 06:37 agis_schedconf.cvmfs.json
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas   1588641 Jul 11 06:37 agis_ddmendpoints.agis.ALL.json
[2025-07-11 08:13:26] drwx------ 4 boincer umatlas      4096 Jul 11 06:37 pilot3
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas      5869 Jul 11 08:10 init_data.xml
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas 269686123 Jul 11 08:12 HITS.45482148._015028.pool.root.1
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas       530 Jul 11 08:12 boinc_task_state.xml
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas        95 Jul 11 08:12 pilot_heartbeat.json
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas      1046 Jul 11 08:12 memory_monitor_summary.json
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas    371537 Jul 11 08:12 log.45482148._015028.job.log.tgz.1
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas        27 Jul 11 08:12 wrapper_checkpoint.txt
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas      8192 Jul 11 08:12 boinc_mmap_file
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas      7846 Jul 11 08:13 heartbeat.json
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas      4552 Jul 11 08:13 pilotlog.txt
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas    538784 Jul 11 08:13 log.45482148._015028.job.log.1
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas       357 Jul 11 08:13 output.list
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas       620 Jul 11 08:13 runtime_log
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas    931840 Jul 11 08:13 result.tar.gz
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas      8662 Jul 11 08:13 runtime_log.err
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas       659 Jul 11 08:13 MSYKDmOFvs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmijELDm0DpGJo.diag
[2025-07-11 08:13:26] -rw-r--r-- 1 boincer umatlas     21488 Jul 11 08:13 stderr.txt
[2025-07-11 08:13:26] HITS file was successfully produced:
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas 269686123 Jul 11 08:12 shared/HITS.pool.root.1
[2025-07-11 08:13:26]  *** Contents of shared directory: ***
[2025-07-11 08:13:26] total 575424
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas 318039271 Jul 11 06:37 ATLAS.root_0
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 11 06:37 start_atlas.sh
[2025-07-11 08:13:26] -rw-r--r-- 2 boincer umatlas    542912 Jul 11 06:37 input.tar.gz
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas 269686123 Jul 11 08:12 HITS.pool.root.1
[2025-07-11 08:13:26] -rw------- 1 boincer umatlas    931840 Jul 11 08:13 result.tar.gz
08:13:28 (21008): run_atlas exited; CPU time 62314.309374
08:13:28 (21008): called boinc_finish(0)

</stderr_txt>
]]>

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