Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:45:37 (2317505): wrapper (7.7.26015): starting
01:45:37 (2317505): wrapper: running run_atlas (--nthreads 10)
[2025-07-11 01:45:37] Arguments: --nthreads 10
[2025-07-11 01:45:37] Threads: 10
[2025-07-11 01:45:37] Checking for CVMFS
[2025-07-11 01:45:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 01:45:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 01:45:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 01:45:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 01:45:40] 2.12.6.0 4311 3850 247512 148184 1 368 31683947 32935936 18703 16776704 0 19995631 99.613 17739804 28671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-11 01:45:40] CVMFS is ok
[2025-07-11 01:45:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 01:45:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 01:45:40] Further information can be found at the LHC@home message board.
[2025-07-11 01:45:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 01:45:40] Checking for apptainer binary...
[2025-07-11 01:45:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 01:45:40] Running /usr/bin/apptainer --version
[2025-07-11 01:45:40] apptainer version 1.4.1-1.el9
[2025-07-11 01:45:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 01:45:41] c-5-4.aglt2.org
[2025-07-11 01:45:41] apptainer works
[2025-07-11 01:45:41] Set ATHENA_PROC_NUMBER=10
[2025-07-11 01:45:41] Set ATHENA_CORE_NUMBER=10
[2025-07-11 01:45:41] Starting ATLAS job with PandaID=6721339824
[2025-07-11 01:45:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 10:29:50]  *** The last 200 lines of the pilot log: ***
[2025-07-11 10:29:50] 2025-07-11 14:29:12,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,382 | INFO     | monitor loop #1718: job 0:6721339824 is in state 'finished'
[2025-07-11 10:29:50] 2025-07-11 14:29:15,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,643 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-11 10:29:50] 2025-07-11 14:29:15,650 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9712999999997
[2025-07-11 10:29:50] 2025-07-11 14:29:15,657 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6721339824/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,658 | INFO     | extracted standard info from prmon json
[2025-07-11 10:29:50] 2025-07-11 14:29:15,658 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 10:29:50] 2025-07-11 14:29:15,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 10:29:50] 2025-07-11 14:29:15,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 10:29:50] 2025-07-11 14:29:15,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 10:29:50] 2025-07-11 14:29:15,668 | INFO     | fitting pss+swap vs Time
[2025-07-11 10:29:50] 2025-07-11 14:29:15,670 | INFO     | sum of square deviations: 41861186027.05643
[2025-07-11 10:29:50] 2025-07-11 14:29:15,676 | INFO     | sum of deviations: -36267859115.4172
[2025-07-11 10:29:50] 2025-07-11 14:29:15,676 | INFO     | mean x: 1752228499.957115
[2025-07-11 10:29:50] 2025-07-11 14:29:15,676 | INFO     | mean y: 2284326.799220273
[2025-07-11 10:29:50] 2025-07-11 14:29:15,677 | INFO     | -- intersect: 1520386951.349538
[2025-07-11 10:29:50] 2025-07-11 14:29:15,677 | INFO     | intersect: 1520386951.349538
[2025-07-11 10:29:50] 2025-07-11 14:29:15,677 | INFO     | chi2: 3.639163655446753
[2025-07-11 10:29:50] 2025-07-11 14:29:15,678 | INFO     | sum of square deviations: 40649133164.36222
[2025-07-11 10:29:50] 2025-07-11 14:29:15,685 | INFO     | sum of deviations: -3124937334.047239
[2025-07-11 10:29:50] 2025-07-11 14:29:15,685 | INFO     | mean x: 1752228347.464567
[2025-07-11 10:29:50] 2025-07-11 14:29:15,685 | INFO     | mean y: 2288466.0807086616
[2025-07-11 10:29:50] 2025-07-11 14:29:15,685 | INFO     | -- intersect: 136992538.5790732
[2025-07-11 10:29:50] 2025-07-11 14:29:15,686 | INFO     | intersect: 136992538.5790732
[2025-07-11 10:29:50] 2025-07-11 14:29:15,686 | INFO     | chi2: 2.970672857963905
[2025-07-11 10:29:50] 2025-07-11 14:29:15,686 | INFO     | current chi2=2.970672857963905 (change=18.36935243300517 %)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,687 | INFO     | right removable region: 507
[2025-07-11 10:29:50] 2025-07-11 14:29:15,687 | INFO     | sum of square deviations: 40648864702.4312
[2025-07-11 10:29:50] 2025-07-11 14:29:15,695 | INFO     | sum of deviations: -134642122730.93709
[2025-07-11 10:29:50] 2025-07-11 14:29:15,696 | INFO     | mean x: 1752228652.4665353
[2025-07-11 10:29:50] 2025-07-11 14:29:15,696 | INFO     | mean y: 2296668.94488189
[2025-07-11 10:29:50] 2025-07-11 14:29:15,696 | INFO     | -- intersect: 5806241920.679137
[2025-07-11 10:29:50] 2025-07-11 14:29:15,696 | INFO     | intersect: 5806241920.679137
[2025-07-11 10:29:50] 2025-07-11 14:29:15,697 | INFO     | chi2: 1.6543307070646587
[2025-07-11 10:29:50] 2025-07-11 14:29:15,697 | INFO     | current chi2=1.6543307070646587 (change=54.54090929412821 %)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,698 | INFO     | sum of square deviations: 39460171727.7137
[2025-07-11 10:29:50] 2025-07-11 14:29:15,705 | INFO     | sum of deviations: -152586254291.3458
[2025-07-11 10:29:50] 2025-07-11 14:29:15,705 | INFO     | mean x: 1752228804.9761431
[2025-07-11 10:29:50] 2025-07-11 14:29:15,705 | INFO     | mean y: 2298965.4711729623
[2025-07-11 10:29:50] 2025-07-11 14:29:15,705 | INFO     | -- intersect: 6777891120.964354
[2025-07-11 10:29:50] 2025-07-11 14:29:15,705 | INFO     | intersect: 6777891120.964354
[2025-07-11 10:29:50] 2025-07-11 14:29:15,706 | INFO     | chi2: 1.5639685577608402
[2025-07-11 10:29:50] 2025-07-11 14:29:15,706 | INFO     | current chi2=1.5639685577608402 (change=5.462157531014547 %)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,706 | INFO     | left removable region: 20
[2025-07-11 10:29:50] 2025-07-11 14:29:15,707 | INFO     | sum of square deviations: 35812878502.98141
[2025-07-11 10:29:50] 2025-07-11 14:29:15,713 | INFO     | sum of deviations: -92693914849.87274
[2025-07-11 10:29:50] 2025-07-11 14:29:15,713 | INFO     | mean x: 1752228926.9938397
[2025-07-11 10:29:50] 2025-07-11 14:29:15,713 | INFO     | mean y: 2299848.3757700208
[2025-07-11 10:29:50] 2025-07-11 14:29:15,713 | INFO     | -- intersect: 4537566650.309308
[2025-07-11 10:29:50] 2025-07-11 14:29:15,713 | INFO     | intersect: 4537566650.309308
[2025-07-11 10:29:50] 2025-07-11 14:29:15,714 | INFO     | chi2: 0.8040086726886205
[2025-07-11 10:29:50] 2025-07-11 14:29:15,714 | INFO     | -- intersect: 4537566650.309308
[2025-07-11 10:29:50] 2025-07-11 14:29:15,715 | INFO     | current memory leak: -2.59 B/s (using 487 data points, chi2=0.80)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,715 | INFO     | could have reported an average CPU frequency of 2601 MHz (20 samples)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | ..............................
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . Timing measurements:
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . get job = 0 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . initial setup = 8 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . payload setup = 39 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . stage-in = 0 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,716 | INFO     | . payload execution = 31271 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,717 | INFO     | . stage-out = 4 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,717 | INFO     | . log creation = 0 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,717 | INFO     | ..............................
[2025-07-11 10:29:50] 2025-07-11 14:29:15,825 | INFO     | 
[2025-07-11 10:29:50] 2025-07-11 14:29:15,825 | INFO     | job summary report
[2025-07-11 10:29:50] 2025-07-11 14:29:15,825 | INFO     | --------------------------------------------------
[2025-07-11 10:29:50] 2025-07-11 14:29:15,825 | INFO     | PanDA job id: 6721339824
[2025-07-11 10:29:50] 2025-07-11 14:29:15,825 | INFO     | task id: 45482148
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | errors: (none)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | pilot state: finished 
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | transexitcode: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | exeerrorcode: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | exeerrordiag: 
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | exitcode: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | exitmsg: OK
[2025-07-11 10:29:50] 2025-07-11 14:29:15,826 | INFO     | cpuconsumptiontime: 72722 s
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | nevents: 400
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | neventsw: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | pid: 2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | pgrp: 2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | corecount: 10
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | event service: False
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | sizes: {0: 2381367, 1: 2382223, 2: 2382223, 13: 2382251, 16: 2382569, 24: 2382597, 31314: 2420600, 31319: 2440979, 31321: 2441035, 31339: 2441229}
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | --------------------------------------------------
[2025-07-11 10:29:50] 2025-07-11 14:29:15,827 | INFO     | 
[2025-07-11 10:29:50] 2025-07-11 14:29:15,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-11 10:29:50] 2025-07-11 14:29:15,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 10:29:50] 2025-07-11 14:29:15,853 | INFO     | job 6721339824 has completed (purged errors)
[2025-07-11 10:29:50] 2025-07-11 14:29:15,853 | INFO     | overall cleanup function is called
[2025-07-11 10:29:50] 2025-07-11 14:29:16,862 | INFO     | --- collectZombieJob: --- 10, [2329034]
[2025-07-11 10:29:50] 2025-07-11 14:29:16,863 | INFO     | zombie collector waiting for pid 2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:16,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 10:29:50] 2025-07-11 14:29:16,863 | INFO     | collected zombie processes
[2025-07-11 10:29:50] 2025-07-11 14:29:16,863 | INFO     | will attempt to kill all subprocesses of pid=2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:17,552 | INFO     | process IDs to be killed: [2329034] (in reverse order)
[2025-07-11 10:29:50] 2025-07-11 14:29:17,666 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 10:29:50] 2025-07-11 14:29:17,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 10:29:50] 2025-07-11 14:29:17,718 | INFO     | did not find any defunct processes belonging to 2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:17,753 | INFO     | did not find any defunct processes belonging to 2329034
[2025-07-11 10:29:50] 2025-07-11 14:29:17,754 | INFO     | ready for new job
[2025-07-11 10:29:50] 2025-07-11 14:29:17,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 10:29:50] 2025-07-11 14:29:17,762 | INFO     | ***************************************
[2025-07-11 10:29:50] 2025-07-11 14:29:17,762 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 10:29:50] 2025-07-11 14:29:17,762 | INFO     | ***************************************
[2025-07-11 10:29:50] 2025-07-11 14:29:17,762 | INFO     | 
[2025-07-11 10:29:50] 2025-07-11 14:29:17,781 | INFO     | architecture information:
[2025-07-11 10:29:50] 2025-07-11 14:29:17,782 | INFO     | executing command: cat /etc/os-release
[2025-07-11 10:29:50] 2025-07-11 14:29:17,822 | INFO     | cat /etc/os-release:
[2025-07-11 10:29:50] NAME="CentOS Linux"
[2025-07-11 10:29:50] VERSION="7 (Core)"
[2025-07-11 10:29:50] ID="centos"
[2025-07-11 10:29:50] ID_LIKE="rhel fedora"
[2025-07-11 10:29:50] VERSION_ID="7"
[2025-07-11 10:29:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 10:29:50] ANSI_COLOR="0;31"
[2025-07-11 10:29:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 10:29:50] HOME_URL="https://www.centos.org/"
[2025-07-11 10:29:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 10:29:50] 
[2025-07-11 10:29:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 10:29:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 10:29:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 10:29:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 10:29:50] 
[2025-07-11 10:29:50] 2025-07-11 14:29:17,822 | INFO     | ***************************************
[2025-07-11 10:29:50] 2025-07-11 14:29:18,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-11 10:29:50] 2025-07-11 14:29:18,351 | INFO     | sufficient remaining disk space (76292292608 B)
[2025-07-11 10:29:50] 2025-07-11 14:29:18,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 10:29:50] 2025-07-11 14:29:18,352 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 10:29:50] 2025-07-11 14:29:18,352 | INFO     | update_server=False
[2025-07-11 10:29:50] 2025-07-11 14:29:18,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 10:29:50] 2025-07-11 14:29:18,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 10:29:50] 2025-07-11 14:29:18,354 | INFO     | all data control threads have been joined
[2025-07-11 10:29:50] 2025-07-11 14:29:18,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 10:29:50] 2025-07-11 14:29:18,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 10:29:50] 2025-07-11 14:29:18,899 | INFO     | aborting loop
[2025-07-11 10:29:50] 2025-07-11 14:29:19,358 | INFO     | [job] retrieve thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:19,361 | INFO     | [data] control thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:19,379 | INFO     | all payload control threads have been joined
[2025-07-11 10:29:50] 2025-07-11 14:29:19,431 | INFO     | [payload] failed_post thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:19,460 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:19,778 | INFO     | all job control threads have been joined
[2025-07-11 10:29:50] 2025-07-11 14:29:19,906 | INFO     | [job] job monitor thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:19,974 | INFO     | [payload] validate_post thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,249 | INFO     | [job] validate thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,285 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,348 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,386 | INFO     | [payload] control thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,438 | INFO     | [data] copytool_in thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,785 | INFO     | [job] control thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:20,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 10:29:50] 2025-07-11 14:29:20,852 | INFO     | [data] copytool_out thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:21,846 | INFO     | [job] queue monitor thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:22,362 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 10:29:50] 2025-07-11 14:29:24,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639277020992)>', '<ExcThread(monitor, started 140638561494784)>']
[2025-07-11 10:29:50] 2025-07-11 14:29:29,419 | INFO     | all workflow threads have been joined
[2025-07-11 10:29:50] 2025-07-11 14:29:29,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 10:29:50] 2025-07-11 14:29:29,420 | INFO     | traces error code: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:29,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 10:29:50] 2025-07-11 14:29:47,323 | INFO     | 31390s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-11 10:29:50] 2025-07-11 14:29:48,894 | INFO     | PID=2321130 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | INFO     | .. there are 41 such processes running
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 10:29:50] 2025-07-11 14:29:48,895 | INFO     | [monitor] control thread has ended
[2025-07-11 10:29:50] 2025-07-11 14:29:49,383 [wrapper] ==== pilot stdout END ====
[2025-07-11 10:29:50] 2025-07-11 14:29:49,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 10:29:50] 2025-07-11 14:29:49,389 [wrapper] pilotpid: 2321130
[2025-07-11 10:29:50] 2025-07-11 14:29:49,392 [wrapper] Pilot exit status: 0
[2025-07-11 10:29:50] 2025-07-11 14:29:49,467 [wrapper] pandaids: 6721339824
[2025-07-11 10:29:50] 2025-07-11 14:29:49,951 [wrapper] cleanup supervisor_pilot 3432088 2321131
[2025-07-11 10:29:50] 2025-07-11 14:29:49,985 [wrapper] Test setup, not cleaning
[2025-07-11 10:29:50] 2025-07-11 14:29:49,990 [wrapper] apfmon messages muted
[2025-07-11 10:29:50] 2025-07-11 14:29:49,993 [wrapper] ==== wrapper stdout END ====
[2025-07-11 10:29:50] 2025-07-11 14:29:49,995 [wrapper] ==== wrapper stderr END ====
[2025-07-11 10:29:50]  *** Error codes and diagnostics ***
[2025-07-11 10:29:50]     "exeErrorCode": 0,
[2025-07-11 10:29:50]     "exeErrorDiag": "",
[2025-07-11 10:29:50]     "pilotErrorCode": 0,
[2025-07-11 10:29:50]     "pilotErrorDiag": "",
[2025-07-11 10:29:50]  *** Listing of results directory ***
[2025-07-11 10:29:50] total 584400
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas    530466 Jul  7 02:09 pilot3.tar.gz
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas      5112 Jul  7 02:43 queuedata.json
[2025-07-11 10:29:50] -rwx------. 1 boincer umatlas     36292 Jul  7 02:44 runpilot2-wrapper.sh
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas       100 Jul 11 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 10:29:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 11 01:45 run_atlas
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas       105 Jul 11 01:45 job.xml
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas 321919806 Jul 11 01:45 EVNT.45482146._000581.pool.root.1
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 11 01:45 start_atlas.sh
[2025-07-11 10:29:50] drwxrwx--x. 2 boincer umatlas      4096 Jul 11 01:45 shared
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas    542912 Jul 11 01:45 input.tar.gz
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas         0 Jul 11 01:45 boinc_lockfile
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas      2617 Jul 11 01:45 pandaJob.out
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas    975880 Jul 11 01:46 agis_schedconf.cvmfs.json
[2025-07-11 10:29:50] drwx------. 4 boincer umatlas      4096 Jul 11 01:46 pilot3
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas       531 Jul 11 10:27 boinc_task_state.xml
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas 266841510 Jul 11 10:27 HITS.45482148._014583.pool.root.1
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas      6655 Jul 11 10:28 init_data.xml
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas      1040 Jul 11 10:28 memory_monitor_summary.json
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas   1588641 Jul 11 10:28 agis_ddmendpoints.agis.ALL.json
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas    570465 Jul 11 10:28 log.45482148._014583.job.log.tgz.1
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas        95 Jul 11 10:29 pilot_heartbeat.json
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas      7818 Jul 11 10:29 heartbeat.json
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas      8192 Jul 11 10:29 boinc_mmap_file
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas       939 Jul 11 10:29 pilotlog.txt
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas        28 Jul 11 10:29 wrapper_checkpoint.txt
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas   2328031 Jul 11 10:29 log.45482148._014583.job.log.1
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas       357 Jul 11 10:29 output.list
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas       620 Jul 11 10:29 runtime_log
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas   2918400 Jul 11 10:29 result.tar.gz
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas      8648 Jul 11 10:29 runtime_log.err
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas       655 Jul 11 10:29 b56KDmwlus7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqdELDma80IFn.diag
[2025-07-11 10:29:50] -rw-r--r--. 1 boincer umatlas     21281 Jul 11 10:29 stderr.txt
[2025-07-11 10:29:50] HITS file was successfully produced:
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas 266841510 Jul 11 10:27 shared/HITS.pool.root.1
[2025-07-11 10:29:50]  *** Contents of shared directory: ***
[2025-07-11 10:29:50] total 578368
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas 321919806 Jul 11 01:45 ATLAS.root_0
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 11 01:45 start_atlas.sh
[2025-07-11 10:29:50] -rw-r--r--. 2 boincer umatlas    542912 Jul 11 01:45 input.tar.gz
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas 266841510 Jul 11 10:27 HITS.pool.root.1
[2025-07-11 10:29:50] -rw-------. 1 boincer umatlas   2918400 Jul 11 10:29 result.tar.gz
10:29:51 (2317505): run_atlas exited; CPU time 74076.430654
10:29:51 (2317505): called boinc_finish(0)

</stderr_txt>
]]>

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