Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:30:18 (22155): wrapper (7.7.26015): starting
06:30:18 (22155): wrapper: running run_atlas (--nthreads 8)
[2025-07-11 06:30:18] Arguments: --nthreads 8
[2025-07-11 06:30:18] Threads: 8
[2025-07-11 06:30:18] Checking for CVMFS
[2025-07-11 06:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-11 06:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-11 06:30:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-11 06:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-11 06:30:21] 2.11.2.0 18802 86122 106836 148183 3 15 17516167 25165825 2473 130560 0 68123775 99.886 40548730 3221 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-11 06:30:21] CVMFS is ok
[2025-07-11 06:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 06:30:21] Checking for apptainer binary...
[2025-07-11 06:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-11 06:30:21] Running /usr/bin/apptainer --version
[2025-07-11 06:30:21] apptainer version 1.3.2-1.el7
[2025-07-11 06:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 06:30:28] cg-vwn230.simple-grid.lan
[2025-07-11 06:30:28] apptainer works
[2025-07-11 06:30:28] Set ATHENA_PROC_NUMBER=8
[2025-07-11 06:30:28] Set ATHENA_CORE_NUMBER=8
[2025-07-11 06:30:28] Starting ATLAS job with PandaID=6727212457
[2025-07-11 06:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 18:15:58]  *** The last 200 lines of the pilot log: ***
[2025-07-11 18:15:58] 2025-07-11 15:54:55,467 | INFO     | monitor loop #2819: job 0:6727212457 is in state 'finished'
[2025-07-11 18:15:58] 2025-07-11 15:54:55,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,060 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-11 18:15:58] 2025-07-11 15:54:57,061 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-11 18:15:58] 2025-07-11 15:54:57,063 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6727212457/memory_monitor_summary.json (trf name=prmon)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,063 | INFO     | extracted standard info from prmon json
[2025-07-11 18:15:58] 2025-07-11 15:54:57,064 | INFO     | extracted standard memory fields from prmon json
[2025-07-11 18:15:58] 2025-07-11 15:54:57,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-11 18:15:58] 2025-07-11 15:54:57,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-11 18:15:58] 2025-07-11 15:54:57,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-11 18:15:58] 2025-07-11 15:54:57,079 | INFO     | fitting pss+swap vs Time
[2025-07-11 18:15:58] 2025-07-11 15:54:57,082 | INFO     | sum of square deviations: 89553344210.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,112 | INFO     | sum of deviations: 112086279207.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,113 | INFO     | mean x: 1752229042.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,113 | INFO     | mean y: 2500300.7700453857
[2025-07-11 18:15:58] 2025-07-11 15:54:57,113 | INFO     | -- intersect: -2190615270.3879886
[2025-07-11 18:15:58] 2025-07-11 15:54:57,113 | INFO     | intersect: -2190615270.3879886
[2025-07-11 18:15:58] 2025-07-11 15:54:57,114 | INFO     | chi2: 4.674140303368649
[2025-07-11 18:15:58] 2025-07-11 15:54:57,115 | INFO     | sum of square deviations: 87536450580.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,140 | INFO     | sum of deviations: 155470645831.99997
[2025-07-11 18:15:58] 2025-07-11 15:54:57,141 | INFO     | mean x: 1752228889.5
[2025-07-11 18:15:58] 2025-07-11 15:54:57,141 | INFO     | mean y: 2503560.6798780486
[2025-07-11 18:15:58] 2025-07-11 15:54:57,141 | INFO     | -- intersect: -3109573240.3675547
[2025-07-11 18:15:58] 2025-07-11 15:54:57,141 | INFO     | intersect: -3109573240.3675547
[2025-07-11 18:15:58] 2025-07-11 15:54:57,142 | INFO     | chi2: 3.9100930465493473
[2025-07-11 18:15:58] 2025-07-11 15:54:57,142 | INFO     | current chi2=3.9100930465493473 (change=16.34626278266943 %)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,142 | INFO     | right removable region: 655
[2025-07-11 18:15:58] 2025-07-11 15:54:57,143 | INFO     | sum of square deviations: 87536450580.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,162 | INFO     | sum of deviations: -93575341481.5
[2025-07-11 18:15:58] 2025-07-11 15:54:57,162 | INFO     | mean x: 1752229194.5
[2025-07-11 18:15:58] 2025-07-11 15:54:57,162 | INFO     | mean y: 2515836.9314024393
[2025-07-11 18:15:58] 2025-07-11 15:54:57,162 | INFO     | -- intersect: 1875626342.8153753
[2025-07-11 18:15:58] 2025-07-11 15:54:57,162 | INFO     | intersect: 1875626342.8153753
[2025-07-11 18:15:58] 2025-07-11 15:54:57,163 | INFO     | chi2: 1.0949412591279195
[2025-07-11 18:15:58] 2025-07-11 15:54:57,163 | INFO     | current chi2=1.0949412591279195 (change=76.57448882441983 %)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,164 | INFO     | sum of square deviations: 85550069150.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,184 | INFO     | sum of deviations: -117234047003.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,184 | INFO     | mean x: 1752229347.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,184 | INFO     | mean y: 2517648.079877112
[2025-07-11 18:15:58] 2025-07-11 15:54:57,184 | INFO     | -- intersect: 2403695574.2608285
[2025-07-11 18:15:58] 2025-07-11 15:54:57,184 | INFO     | intersect: 2403695574.2608285
[2025-07-11 18:15:58] 2025-07-11 15:54:57,185 | INFO     | chi2: 1.0186142021024311
[2025-07-11 18:15:58] 2025-07-11 15:54:57,185 | INFO     | current chi2=1.0186142021024311 (change=6.97088144128207 %)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,185 | INFO     | left removable region: 20
[2025-07-11 18:15:58] 2025-07-11 15:54:57,186 | INFO     | sum of square deviations: 79395981670.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,205 | INFO     | sum of deviations: -60319635341.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,205 | INFO     | mean x: 1752229469.0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,205 | INFO     | mean y: 2520091.3968503936
[2025-07-11 18:15:58] 2025-07-11 15:54:57,205 | INFO     | -- intersect: 1333744170.7606905
[2025-07-11 18:15:58] 2025-07-11 15:54:57,206 | INFO     | intersect: 1333744170.7606905
[2025-07-11 18:15:58] 2025-07-11 15:54:57,206 | INFO     | chi2: 0.20503265356202702
[2025-07-11 18:15:58] 2025-07-11 15:54:57,207 | INFO     | -- intersect: 1333744170.7606905
[2025-07-11 18:15:58] 2025-07-11 15:54:57,207 | INFO     | current memory leak: -0.76 B/s (using 635 data points, chi2=0.21)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | ..............................
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . Timing measurements:
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . get job = 0 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . initial setup = 7 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . payload setup = 143 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . stage-in = 0 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . payload execution = 40447 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,208 | INFO     | . stage-out = 3 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,209 | INFO     | . log creation = 1 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,209 | INFO     | ..............................
[2025-07-11 18:15:58] 2025-07-11 15:54:57,388 | INFO     | 
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | job summary report
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | --------------------------------------------------
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | PanDA job id: 6727212457
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | task id: 45436060
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | errors: (none)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | pilot state: finished 
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | transexitcode: 0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | exeerrorcode: 0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | exeerrordiag: 
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | exitcode: 0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,389 | INFO     | exitmsg: OK
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | cpuconsumptiontime: 159732 s
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | nevents: 400
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | neventsw: 0
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | pid: 318
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | pgrp: 318
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | corecount: 8
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | event service: False
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | sizes: {0: 2381382, 1: 2382238, 2: 2382238, 13: 2382266, 23: 2382322, 34: 2382350, 45: 2382506, 55: 2382534, 66: 2382562, 77: 2382590, 88: 2382646, 98: 2383244, 40
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | --------------------------------------------------
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | 
[2025-07-11 18:15:58] 2025-07-11 15:54:57,390 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-11 18:15:58] 2025-07-11 15:54:57,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | job 6727212457 has completed (purged errors)
[2025-07-11 18:15:58] 2025-07-11 15:54:57,989 | INFO     | overall cleanup function is called
[2025-07-11 18:15:58] 2025-07-11 15:54:58,998 | INFO     | --- collectZombieJob: --- 10, [318]
[2025-07-11 18:15:58] 2025-07-11 15:54:58,999 | INFO     | zombie collector waiting for pid 318
[2025-07-11 18:15:58] 2025-07-11 15:54:58,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-11 18:15:58] 2025-07-11 15:54:58,999 | INFO     | collected zombie processes
[2025-07-11 18:15:58] 2025-07-11 15:54:58,999 | INFO     | will attempt to kill all subprocesses of pid=318
[2025-07-11 18:15:58] 2025-07-11 15:54:59,106 | INFO     | process IDs to be killed: [318] (in reverse order)
[2025-07-11 18:15:58] 2025-07-11 15:54:59,756 | WARNING  | found no corresponding commands to process id(s)
[2025-07-11 18:15:58] 2025-07-11 15:54:59,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-11 18:15:58] 2025-07-11 15:54:59,759 | INFO     | did not find any defunct processes belonging to 318
[2025-07-11 18:15:58] 2025-07-11 15:54:59,762 | INFO     | did not find any defunct processes belonging to 318
[2025-07-11 18:15:58] 2025-07-11 15:54:59,762 | INFO     | ready for new job
[2025-07-11 18:15:58] 2025-07-11 15:54:59,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-11 18:15:58] 2025-07-11 15:54:59,765 | INFO     | ***************************************
[2025-07-11 18:15:58] 2025-07-11 15:54:59,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-11 18:15:58] 2025-07-11 15:54:59,765 | INFO     | ***************************************
[2025-07-11 18:15:58] 2025-07-11 15:54:59,765 | INFO     | 
[2025-07-11 18:15:58] 2025-07-11 15:54:59,766 | INFO     | pilot is running in a VM
[2025-07-11 18:15:58] 2025-07-11 15:54:59,766 | INFO     | architecture information:
[2025-07-11 18:15:58] 2025-07-11 15:54:59,766 | INFO     | executing command: cat /etc/os-release
[2025-07-11 18:15:58] 2025-07-11 15:55:00,002 | INFO     | cat /etc/os-release:
[2025-07-11 18:15:58] NAME="CentOS Linux"
[2025-07-11 18:15:58] VERSION="7 (Core)"
[2025-07-11 18:15:58] ID="centos"
[2025-07-11 18:15:58] ID_LIKE="rhel fedora"
[2025-07-11 18:15:58] VERSION_ID="7"
[2025-07-11 18:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-11 18:15:58] ANSI_COLOR="0;31"
[2025-07-11 18:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-11 18:15:58] HOME_URL="https://www.centos.org/"
[2025-07-11 18:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-11 18:15:58] 
[2025-07-11 18:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-11 18:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-11 18:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-11 18:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-11 18:15:58] 
[2025-07-11 18:15:58] 2025-07-11 15:55:00,002 | INFO     | ***************************************
[2025-07-11 18:15:58] 2025-07-11 15:55:00,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-11 18:15:58] 2025-07-11 15:55:00,643 | INFO     | sufficient remaining disk space (497638440960 B)
[2025-07-11 18:15:58] 2025-07-11 15:55:00,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-11 18:15:58] 2025-07-11 15:55:00,644 | INFO     | current server update state: UPDATING_FINAL
[2025-07-11 18:15:58] 2025-07-11 15:55:00,644 | INFO     | update_server=False
[2025-07-11 18:15:58] 2025-07-11 15:55:00,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-11 18:15:58] 2025-07-11 15:55:00,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-11 18:15:58] 2025-07-11 15:55:01,299 | INFO     | all data control threads have been joined
[2025-07-11 18:15:58] 2025-07-11 15:55:01,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-11 18:15:58] 2025-07-11 15:55:01,497 | INFO     | aborting loop
[2025-07-11 18:15:58] 2025-07-11 15:55:01,649 | INFO     | [job] retrieve thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:01,788 | INFO     | all job control threads have been joined
[2025-07-11 18:15:58] 2025-07-11 15:55:01,908 | INFO     | [payload] validate_post thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,112 | INFO     | [data] copytool_in thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,114 | INFO     | [payload] validate_pre thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,144 | INFO     | all payload control threads have been joined
[2025-07-11 18:15:58] 2025-07-11 15:55:02,305 | INFO     | [data] control thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,327 | INFO     | [job] validate thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-11 18:15:58] 2025-07-11 15:55:02,502 | INFO     | [job] job monitor thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,651 | INFO     | [data] copytool_out thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,729 | INFO     | [payload] failed_post thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,793 | INFO     | [job] control thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,910 | INFO     | [job] create_data_payload thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:02,993 | INFO     | [payload] execute_payloads thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:03,150 | INFO     | [payload] control thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:03,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-11 18:15:58] 2025-07-11 15:55:03,410 | INFO     | [job] queue monitor thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:07,386 | INFO     | [data] queue_monitor thread has finished
[2025-07-11 18:15:58] 2025-07-11 15:55:08,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682691237696)>', '<ExcThread(monitor, started 140681720887040)>']
[2025-07-11 18:15:58] 2025-07-11 15:55:13,975 | INFO     | all workflow threads have been joined
[2025-07-11 18:15:58] 2025-07-11 15:55:13,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-11 18:15:58] 2025-07-11 15:55:13,976 | INFO     | traces error code: 0
[2025-07-11 18:15:58] 2025-07-11 15:55:13,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-11 18:15:58] 2025-07-11 15:55:30,202 | INFO     | PID=26178 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-11 18:15:58] 2025-07-11 15:55:30,203 | INFO     | .. there are 9 such processes running
[2025-07-11 18:15:58] 2025-07-11 15:55:30,203 | INFO     | found 0 job(s) in 20 queues
[2025-07-11 18:15:58] 2025-07-11 15:55:30,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-11 18:15:58] 2025-07-11 15:55:30,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-11 18:15:58] 2025-07-11 15:55:30,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-11 18:15:58] 2025-07-11 15:55:30,204 | CRITICAL | thread 'MainThread' is not alive
[2025-07-11 18:15:58] 2025-07-11 15:55:30,204 | INFO     | [monitor] control thread has ended
[2025-07-11 18:15:58] 2025-07-11 15:55:30,459 [wrapper] ==== pilot stdout END ====
[2025-07-11 18:15:58] 2025-07-11 15:55:30,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-11 18:15:58] 2025-07-11 15:55:30,551 [wrapper] pilotpid: 26178
[2025-07-11 18:15:58] 2025-07-11 15:55:30,636 [wrapper] Pilot exit status: 0
[2025-07-11 18:15:58] 2025-07-11 15:55:31,136 [wrapper] pandaids: 6727212457
[2025-07-11 18:15:58] 2025-07-11 15:55:31,905 [wrapper] cleanup supervisor_pilot 31631 26179
[2025-07-11 18:15:58] 2025-07-11 15:55:31,998 [wrapper] Test setup, not cleaning
[2025-07-11 18:15:58] 2025-07-11 15:55:32,085 [wrapper] apfmon messages muted
[2025-07-11 18:15:58] 2025-07-11 15:55:32,153 [wrapper] ==== wrapper stdout END ====
[2025-07-11 18:15:58] 2025-07-11 15:55:32,198 [wrapper] ==== wrapper stderr END ====
[2025-07-11 18:15:58]  *** Error codes and diagnostics ***
[2025-07-11 18:15:58]     "exeErrorCode": 0,
[2025-07-11 18:15:58]     "exeErrorDiag": "",
[2025-07-11 18:15:58]     "pilotErrorCode": 0,
[2025-07-11 18:15:58]     "pilotErrorDiag": "",
[2025-07-11 18:15:58]  *** Listing of results directory ***
[2025-07-11 18:15:58] total 471028
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc      5112 Jul 10 17:40 queuedata.json
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc    530466 Jul 10 17:40 pilot3.tar.gz
[2025-07-11 18:15:58] -rwx------. 1 boinc boinc     36292 Jul 10 17:42 runpilot2-wrapper.sh
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc       100 Jul 11 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-11 18:15:58] -rwxr-xr-x. 1 boinc boinc      7986 Jul 11 06:30 run_atlas
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc       105 Jul 11 06:30 job.xml
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc    542904 Jul 11 06:30 input.tar.gz
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc      6392 Jul 11 06:30 init_data.xml
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc 266223776 Jul 11 06:30 EVNT.45436057._000002.pool.root.1
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc     15095 Jul 11 06:30 start_atlas.sh
[2025-07-11 18:15:58] drwxrwx--x. 2 boinc boinc        68 Jul 11 06:30 shared
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc         0 Jul 11 06:30 boinc_lockfile
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc      2609 Jul 11 06:30 pandaJob.out
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc    975872 Jul 11 06:33 agis_schedconf.cvmfs.json
[2025-07-11 18:15:58] drwx------. 4 boinc boinc      4096 Jul 11 06:33 pilot3
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc 204239241 Jul 11 17:52 HITS.45436060._000026.pool.root.1
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc       532 Jul 11 17:52 boinc_task_state.xml
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc      1012 Jul 11 17:53 memory_monitor_summary.json
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc   1588641 Jul 11 17:53 agis_ddmendpoints.agis.ALL.json
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc    592474 Jul 11 17:53 log.45436060._000026.job.log.tgz.1
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc      7761 Jul 11 17:54 heartbeat.json
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc        95 Jul 11 17:55 pilot_heartbeat.json
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc       890 Jul 11 17:55 pilotlog.txt
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc   3409908 Jul 11 17:55 log.45436060._000026.job.log.1
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc       357 Jul 11 17:55 output.list
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc       620 Jul 11 17:55 runtime_log
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc   4024320 Jul 11 17:55 result.tar.gz
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc       659 Jul 11 17:55 ZpZNDmZa8t7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYTFLDmiNsM9m.diag
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc      8660 Jul 11 17:55 runtime_log.err
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc      8192 Jul 11 18:15 boinc_mmap_file
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc        29 Jul 11 18:15 wrapper_checkpoint.txt
[2025-07-11 18:15:58] -rw-r--r--. 1 boinc boinc     20799 Jul 11 18:15 stderr.txt
[2025-07-11 18:15:58] HITS file was successfully produced:
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc 204239241 Jul 11 17:52 shared/HITS.pool.root.1
[2025-07-11 18:15:58]  *** Contents of shared directory: ***
[2025-07-11 18:15:58] total 463924
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc    542904 Jul 11 06:30 input.tar.gz
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc 266223776 Jul 11 06:30 ATLAS.root_0
[2025-07-11 18:15:58] -rw-r--r--. 2 boinc boinc     15095 Jul 11 06:30 start_atlas.sh
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc 204239241 Jul 11 17:52 HITS.pool.root.1
[2025-07-11 18:15:58] -rw-------. 1 boinc boinc   4024320 Jul 11 17:55 result.tar.gz
18:16:00 (22155): run_atlas exited; CPU time 160216.000190
18:16:00 (22155): called boinc_finish(0)

</stderr_txt>
]]>

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