Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:43 (3699633): wrapper (7.7.26015): starting
19:39:43 (3699633): wrapper: running run_atlas (--nthreads 12)
[2025-07-12 19:39:43] Arguments: --nthreads 12
[2025-07-12 19:39:43] Threads: 12
[2025-07-12 19:39:43] Checking for CVMFS
[2025-07-12 19:39:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-12 19:39:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-12 19:39:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-12 19:39:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-12 19:39:43] 2.13.0.0 2899787 4476 159180 148260 3 105 19424627 32935936 7361 16776704 0 5568751 99.083 12228214 27413 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-12 19:39:43] CVMFS is ok
[2025-07-12 19:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-12 19:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-12 19:39:43] Further information can be found at the LHC@home message board.
[2025-07-12 19:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-12 19:39:43] Checking for apptainer binary...
[2025-07-12 19:39:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-12 19:39:43] Running /usr/bin/apptainer --version
[2025-07-12 19:39:43] apptainer version 1.4.1-1.el9
[2025-07-12 19:39:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-12 19:39:43] c6-6-39-1.aglt2.org
[2025-07-12 19:39:43] apptainer works
[2025-07-12 19:39:43] Set ATHENA_PROC_NUMBER=12
[2025-07-12 19:39:43] Set ATHENA_CORE_NUMBER=12
[2025-07-12 19:39:43] Starting ATLAS job with PandaID=6720783616
[2025-07-12 19:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 20:39:48]  *** The last 200 lines of the pilot log: ***
[2025-07-12 20:39:48]  lfn=log.45482062._010697.job.log.tgz.1
[2025-07-12 20:39:48]  mtime=0
[2025-07-12 20:39:48]  protocol_id=None
[2025-07-12 20:39:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-12 20:39:48]  replicas=None
[2025-07-12 20:39:48]  scope=mc23_13p6TeV
[2025-07-12 20:39:48]  status=None
[2025-07-12 20:39:48]  status_code=0
[2025-07-12 20:39:48]  storage_token=
[2025-07-12 20:39:48]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6720783616/log.45482062._010697.job.log.tgz.1
[2025-07-12 20:39:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/35/log.45482062._010697.job.log.tgz.1
[2025-07-12 20:39:48]  workdir=None
[2025-07-12 20:39:48] ]
[2025-07-12 20:39:48] 2025-07-13 00:38:57,444 | INFO     | transferring file log.45482062._010697.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6720783616/log.45482062._010697.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-12 20:39:48] 2025-07-13 00:38:57,444 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6720783616/log.45482062._010697.job.log.tgz.1 /tmp/boinchome/slots/1/log.45482062._010697.job
[2025-07-12 20:39:48] 2025-07-13 00:38:57,456 | INFO     | adding to output.list: log.45482062._010697.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/35/log.45482062._010697.job.log.tg
[2025-07-12 20:39:48] 2025-07-13 00:38:57,457 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-12 20:39:48] 2025-07-13 00:38:57,457 | INFO     | summary of transferred files:
[2025-07-12 20:39:48] 2025-07-13 00:38:57,457 | INFO     |  -- lfn=log.45482062._010697.job.log.tgz.1, status_code=0, status=transferred
[2025-07-12 20:39:48] 2025-07-13 00:38:57,457 | INFO     | stage-out finished correctly
[2025-07-12 20:39:48] 2025-07-13 00:38:57,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-12 20:39:48] 2025-07-13 00:38:58,401 | INFO     | job 6720783616 has state=finished
[2025-07-12 20:39:48] 2025-07-13 00:38:58,401 | INFO     | preparing for final server update for job 6720783616 in state='finished'
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | this job has now completed (state=finished)
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | log transfer has been attempted: DONE
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | job 6720783616 has finished - writing final server update
[2025-07-12 20:39:48] 2025-07-13 00:38:58,450 | INFO     | total number of processed events: 400 (read)
[2025-07-12 20:39:48] 2025-07-13 00:38:58,451 | INFO     | executing command: lscpu
[2025-07-12 20:39:48] 2025-07-13 00:38:58,494 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-12 20:39:48] 2025-07-13 00:39:01,067 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-12 20:39:48] 2025-07-13 00:39:01,085 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3510.6586250000005
[2025-07-12 20:39:48] 2025-07-13 00:39:01,102 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6720783616/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,103 | INFO     | extracted standard info from prmon json
[2025-07-12 20:39:48] 2025-07-13 00:39:01,103 | INFO     | extracted standard memory fields from prmon json
[2025-07-12 20:39:48] 2025-07-13 00:39:01,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-12 20:39:48] 2025-07-13 00:39:01,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-12 20:39:48] 2025-07-13 00:39:01,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-12 20:39:48] 2025-07-13 00:39:01,104 | INFO     | fitting pss+swap vs Time
[2025-07-12 20:39:48] 2025-07-13 00:39:01,104 | INFO     | sum of square deviations: 41117050.0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | sum of deviations: -3321115293.0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | mean x: 1752365444.0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | mean y: 2582692.2352941176
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | -- intersect: 141545024939.2626
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | intersect: 141545024939.2626
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | chi2: 0.03425086843613712
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | -- intersect: 141545024939.2626
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | current memory leak: -80.77 B/s (using 51 data points, chi2=0.03)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | could have reported an average CPU frequency of 3447 MHz (5 samples)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | ..............................
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . Timing measurements:
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . get job = 0 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . initial setup = 2 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . payload setup = 4 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . stage-in = 0 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,105 | INFO     | . payload execution = 3523 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,106 | INFO     | . stage-out = 0 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,106 | INFO     | . log creation = 0 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,106 | INFO     | ..............................
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | 
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | job summary report
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | --------------------------------------------------
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | PanDA job id: 6720783616
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | task id: 45482062
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | errors: (none)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-12 20:39:48] 2025-07-13 00:39:01,152 | INFO     | pilot state: finished 
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | transexitcode: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | exeerrorcode: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | exeerrordiag: 
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | exitcode: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | exitmsg: OK
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | cpuconsumptiontime: 39078 s
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | nevents: 400
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | neventsw: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | pid: 3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | pgrp: 3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | corecount: 12
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | event service: False
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | sizes: {0: 2393493, 3: 2393755, 11: 2393783, 3531: 2428475, 3532: 2428475, 3535: 2428701}
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | --------------------------------------------------
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | 
[2025-07-12 20:39:48] 2025-07-13 00:39:01,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | job 6720783616 has completed (purged errors)
[2025-07-12 20:39:48] 2025-07-13 00:39:01,167 | INFO     | overall cleanup function is called
[2025-07-12 20:39:48] 2025-07-13 00:39:02,174 | INFO     | --- collectZombieJob: --- 10, [3722736]
[2025-07-12 20:39:48] 2025-07-13 00:39:02,174 | INFO     | zombie collector waiting for pid 3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:02,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 20:39:48] 2025-07-13 00:39:02,174 | INFO     | collected zombie processes
[2025-07-12 20:39:48] 2025-07-13 00:39:02,174 | INFO     | will attempt to kill all subprocesses of pid=3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:02,330 | INFO     | process IDs to be killed: [3722736] (in reverse order)
[2025-07-12 20:39:48] 2025-07-13 00:39:02,390 | WARNING  | found no corresponding commands to process id(s)
[2025-07-12 20:39:48] 2025-07-13 00:39:02,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-12 20:39:48] 2025-07-13 00:39:02,398 | INFO     | did not find any defunct processes belonging to 3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:02,404 | INFO     | did not find any defunct processes belonging to 3722736
[2025-07-12 20:39:48] 2025-07-13 00:39:02,404 | INFO     | ready for new job
[2025-07-12 20:39:48] 2025-07-13 00:39:02,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-12 20:39:48] 2025-07-13 00:39:02,405 | INFO     | ***************************************
[2025-07-12 20:39:48] 2025-07-13 00:39:02,405 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-12 20:39:48] 2025-07-13 00:39:02,405 | INFO     | ***************************************
[2025-07-12 20:39:48] 2025-07-13 00:39:02,405 | INFO     | 
[2025-07-12 20:39:48] 2025-07-13 00:39:02,419 | INFO     | architecture information:
[2025-07-12 20:39:48] 2025-07-13 00:39:02,419 | INFO     | executing command: cat /etc/os-release
[2025-07-12 20:39:48] 2025-07-13 00:39:02,429 | INFO     | cat /etc/os-release:
[2025-07-12 20:39:48] NAME="CentOS Linux"
[2025-07-12 20:39:48] VERSION="7 (Core)"
[2025-07-12 20:39:48] ID="centos"
[2025-07-12 20:39:48] ID_LIKE="rhel fedora"
[2025-07-12 20:39:48] VERSION_ID="7"
[2025-07-12 20:39:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 20:39:48] ANSI_COLOR="0;31"
[2025-07-12 20:39:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 20:39:48] HOME_URL="https://www.centos.org/"
[2025-07-12 20:39:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 20:39:48] 
[2025-07-12 20:39:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 20:39:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 20:39:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 20:39:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 20:39:48] 
[2025-07-12 20:39:48] 2025-07-13 00:39:02,429 | INFO     | ***************************************
[2025-07-12 20:39:48] 2025-07-13 00:39:02,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | INFO     | sufficient remaining disk space (73772564480 B)
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | INFO     | current server update state: UPDATING_FINAL
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | INFO     | update_server=False
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 20:39:48] 2025-07-13 00:39:02,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 20:39:48] 2025-07-13 00:39:03,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 20:39:48] 2025-07-13 00:39:03,394 | WARNING  | process 3722736 can no longer be monitored (due to stat problems) - aborting
[2025-07-12 20:39:48] 2025-07-13 00:39:03,525 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-07-12 20:39:48] 2025-07-13 00:39:03,634 | INFO     | all data control threads have been joined
[2025-07-12 20:39:48] 2025-07-13 00:39:03,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 20:39:48] 2025-07-13 00:39:03,678 | INFO     | number of running child processes to parent process 3722736: 1
[2025-07-12 20:39:48] 2025-07-13 00:39:03,678 | INFO     | maximum number of monitored processes: 6
[2025-07-12 20:39:48] 2025-07-13 00:39:03,678 | INFO     | aborting job monitoring since job object (job id=6720783616) has expired
[2025-07-12 20:39:48] 2025-07-13 00:39:03,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 20:39:48] 2025-07-13 00:39:03,678 | INFO     | will abort loop
[2025-07-12 20:39:48] 2025-07-13 00:39:03,897 | INFO     | all payload control threads have been joined
[2025-07-12 20:39:48] 2025-07-13 00:39:03,948 | INFO     | [job] retrieve thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:03,948 | INFO     | [job] queue monitor thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,046 | INFO     | all job control threads have been joined
[2025-07-12 20:39:48] 2025-07-13 00:39:04,367 | INFO     | [payload] validate_post thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,408 | INFO     | [payload] failed_post thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,639 | INFO     | [data] control thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,678 | INFO     | [job] job monitor thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,694 | INFO     | [job] validate thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,736 | INFO     | [payload] validate_pre thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,775 | INFO     | [data] copytool_in thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,896 | INFO     | [job] create_data_payload thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:04,902 | INFO     | [payload] control thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:05,017 | INFO     | [data] copytool_out thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:05,051 | INFO     | [job] control thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:05,388 | INFO     | [payload] execute_payloads thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:07,666 | INFO     | [data] queue_monitor thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:13,933 | INFO     | job.realtimelogging is not enabled
[2025-07-12 20:39:48] 2025-07-13 00:39:14,939 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-12 20:39:48] 2025-07-13 00:39:16,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450179159872)>', '<ExcThread(monitor, started 140449683580672)>']
[2025-07-12 20:39:48] 2025-07-13 00:39:21,545 | INFO     | all workflow threads have been joined
[2025-07-12 20:39:48] 2025-07-13 00:39:21,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-12 20:39:48] 2025-07-13 00:39:21,545 | INFO     | traces error code: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:21,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | INFO     | PID=3707013 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | INFO     | .. there are 11 such processes running
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | INFO     | found 0 job(s) in 20 queues
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-12 20:39:48] 2025-07-13 00:39:32,929 | INFO     | [monitor] control thread has ended
[2025-07-12 20:39:48] 2025-07-13 00:39:33,041 [wrapper] ==== pilot stdout END ====
[2025-07-12 20:39:48] 2025-07-13 00:39:33,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 20:39:48] 2025-07-13 00:39:33,045 [wrapper] pilotpid: 3707013
[2025-07-12 20:39:48] 2025-07-13 00:39:33,047 [wrapper] Pilot exit status: 0
[2025-07-12 20:39:48] 2025-07-13 00:39:33,057 [wrapper] pandaids: 6720783616
[2025-07-12 20:39:48] 2025-07-13 00:39:33,097 [wrapper] cleanup supervisor_pilot 3919343 3707015
[2025-07-12 20:39:48] 2025-07-13 00:39:33,099 [wrapper] Test setup, not cleaning
[2025-07-12 20:39:48] 2025-07-13 00:39:33,101 [wrapper] apfmon messages muted
[2025-07-12 20:39:48] 2025-07-13 00:39:33,103 [wrapper] ==== wrapper stdout END ====
[2025-07-12 20:39:48] 2025-07-13 00:39:33,105 [wrapper] ==== wrapper stderr END ====
[2025-07-12 20:39:48]  *** Error codes and diagnostics ***
[2025-07-12 20:39:48]     "exeErrorCode": 0,
[2025-07-12 20:39:48]     "exeErrorDiag": "",
[2025-07-12 20:39:48]     "pilotErrorCode": 0,
[2025-07-12 20:39:48]     "pilotErrorDiag": "",
[2025-07-12 20:39:48]  *** Listing of results directory ***
[2025-07-12 20:39:48] total 574940
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas    530466 Jul  6 09:39 pilot3.tar.gz
[2025-07-12 20:39:48] -rwx------. 1 boincer umatlas     36292 Jul  6 09:54 runpilot2-wrapper.sh
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas      5112 Jul  6 09:54 queuedata.json
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas       100 Jul 12 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 20:39:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 12 19:39 run_atlas
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas       105 Jul 12 19:39 job.xml
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas 321810486 Jul 12 19:39 EVNT.45482060._000428.pool.root.1
[2025-07-12 20:39:48] drwxrwx--x. 2 boincer umatlas      4096 Jul 12 19:39 shared
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas    542884 Jul 12 19:39 input.tar.gz
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 19:39 start_atlas.sh
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas         0 Jul 12 19:39 boinc_lockfile
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas      2534 Jul 12 19:39 pandaJob.out
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas    976542 Jul 12 19:39 agis_schedconf.cvmfs.json
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas   1588641 Jul 12 19:39 agis_ddmendpoints.agis.ALL.json
[2025-07-12 20:39:48] drwx------. 4 boincer umatlas      4096 Jul 12 19:39 pilot3
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas 261598695 Jul 12 20:38 HITS.45482062._010697.pool.root.1
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas       529 Jul 12 20:38 boinc_task_state.xml
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas        95 Jul 12 20:38 pilot_heartbeat.json
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas      1033 Jul 12 20:38 memory_monitor_summary.json
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas    365400 Jul 12 20:38 log.45482062._010697.job.log.tgz.1
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas      7818 Jul 12 20:39 heartbeat.json
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas      6840 Jul 12 20:39 init_data.xml
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas       823 Jul 12 20:39 pilotlog.txt
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas    365874 Jul 12 20:39 log.45482062._010697.job.log.1
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas       357 Jul 12 20:39 output.list
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas       620 Jul 12 20:39 runtime_log
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas    747520 Jul 12 20:39 result.tar.gz
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas       652 Jul 12 20:39 y0ZNDmJ0es7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6uqKDm6kHajn.diag
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas      8667 Jul 12 20:39 runtime_log.err
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas        27 Jul 12 20:39 wrapper_checkpoint.txt
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas      8192 Jul 12 20:39 boinc_mmap_file
[2025-07-12 20:39:48] -rw-r--r--. 1 boincer umatlas     21624 Jul 12 20:39 stderr.txt
[2025-07-12 20:39:48] HITS file was successfully produced:
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas 261598695 Jul 12 20:38 shared/HITS.pool.root.1
[2025-07-12 20:39:48]  *** Contents of shared directory: ***
[2025-07-12 20:39:48] total 571024
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas 321810486 Jul 12 19:39 ATLAS.root_0
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas    542884 Jul 12 19:39 input.tar.gz
[2025-07-12 20:39:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 12 19:39 start_atlas.sh
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas 261598695 Jul 12 20:38 HITS.pool.root.1
[2025-07-12 20:39:48] -rw-------. 1 boincer umatlas    747520 Jul 12 20:39 result.tar.gz
20:39:50 (3699633): run_atlas exited; CPU time 39175.039442
20:39:50 (3699633): called boinc_finish(0)

</stderr_txt>
]]>

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