Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:26:02 (3948863): wrapper (7.7.26015): starting
05:26:02 (3948863): wrapper: running run_atlas (--nthreads 12)
[2025-07-07 05:26:02] Arguments: --nthreads 12
[2025-07-07 05:26:02] Threads: 12
[2025-07-07 05:26:02] Checking for CVMFS
[2025-07-07 05:26:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-07 05:26:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-07 05:26:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-07 05:26:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-07 05:26:04] 2.11.5.0 6905 8339 241044 148039 0 810 33271457 45568000 15392 130560 0 87060519 99.770 62259026 30286 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-07 05:26:04] CVMFS is ok
[2025-07-07 05:26:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-07 05:26:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-07 05:26:04] Further information can be found at the LHC@home message board.
[2025-07-07 05:26:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-07 05:26:04] Checking for apptainer binary...
[2025-07-07 05:26:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-07 05:26:04] Running /usr/bin/apptainer --version
[2025-07-07 05:26:04] apptainer version 1.4.1-1.el9
[2025-07-07 05:26:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-07 05:26:05] wns0079.triumf.lcg
[2025-07-07 05:26:05] apptainer works
[2025-07-07 05:26:05] Set ATHENA_PROC_NUMBER=12
[2025-07-07 05:26:05] Set ATHENA_CORE_NUMBER=12
[2025-07-07 05:26:05] Starting ATLAS job with PandaID=6722621700
[2025-07-07 05:26:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-07 05:31:00]  *** The last 200 lines of the pilot log: ***
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | INFO     | extracted standard memory fields from prmon json
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | WARNING  | wrong length of table data, x=[1751891262.0], y=[1150.0] (must be same and length>=4)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . Timing measurements:
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . get job = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . initial setup = 3 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload setup = 15 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-in = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload execution = 45 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-out = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . log creation = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-07 05:31:00] 2025-07-07 12:30:25,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6722621700/pilotlog.txt
[2025-07-07 05:31:00] 2025-07-07 12:30:25,348 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-07 05:31:00] - Log from pilotlog.txt -
[2025-07-07 05:31:00] 2025-07-07 12:30:25,289 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6722621700/memory_monitor_summary.json (trf name=prmon)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | INFO     | extracted standard info from prmon json
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | INFO     | extracted standard memory fields from prmon json
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | WARNING  | wrong length of table data, x=[1751891262.0], y=[1150.0] (must be same and length>=4)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . Timing measurements:
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . get job = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . initial setup = 3 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload setup = 15 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-in = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload execution = 45 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-out = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . log creation = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-07 05:31:00] 2025-07-07 12:30:25,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6722621700/pilotlog.txt
[2025-07-07 05:31:00] 2025-07-07 12:30:25,349 | WARNING  | 
[2025-07-07 05:31:00] [begin log extracts]
[2025-07-07 05:31:00] - Log from pilotlog.txt -
[2025-07-07 05:31:00] 2025-07-07 12:30:25,289 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6722621700/memory_monitor_summary.json (trf name=prmon)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | INFO     | extracted standard info from prmon json
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | INFO     | extracted standard memory fields from prmon json
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-07 05:31:00] 2025-07-07 12:30:25,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | WARNING  | wrong length of table data, x=[1751891262.0], y=[1150.0] (must be same and length>=4)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | could have reported an average CPU frequency of 2562 MHz (4 samples)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . Timing measurements:
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . get job = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . initial setup = 3 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload setup = 15 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-in = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . payload execution = 45 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . stage-out = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | . log creation = 0 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | ..............................
[2025-07-07 05:31:00] 2025-07-07 12:30:25,291 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-07 05:31:00] 2025-07-07 12:30:25,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6722621700/pilotlog.txt
[2025-07-07 05:31:00] [end log extracts]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,349 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,350 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | 
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | job summary report
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | --------------------------------------------------
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | PanDA job id: 6722621700
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | task id: 45482137
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-07 05:28:04,943 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | pilot state: failed 
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | transexitcode: 65
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | exeerrorcode: 65
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | exitcode: 65
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | cpuconsumptiontime: 17 s
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | nevents: 0
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | neventsw: 0
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | pid: 3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | pgrp: 3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:25,522 | INFO     | corecount: 12
[2025-07-07 05:31:00] 2025-07-07 12:30:25,523 | INFO     | event service: False
[2025-07-07 05:31:00] 2025-07-07 12:30:25,523 | INFO     | sizes: {0: 2366341, 1: 2366540, 12: 2366830, 22: 2366830, 65: 2390058, 66: 2394350, 69: 2394506, 197: 2394672}
[2025-07-07 05:31:00] 2025-07-07 12:30:25,523 | INFO     | --------------------------------------------------
[2025-07-07 05:31:00] 2025-07-07 12:30:25,523 | INFO     | 
[2025-07-07 05:31:00] 2025-07-07 12:30:25,523 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-07 05:31:00] 2025-07-07 12:30:25,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-07 05:31:00] 2025-07-07 12:30:25,733 | INFO     | job 6722621700 has completed (purged errors)
[2025-07-07 05:31:00] 2025-07-07 12:30:25,734 | INFO     | overall cleanup function is called
[2025-07-07 05:31:00] 2025-07-07 12:30:26,740 | INFO     | --- collectZombieJob: --- 10, [3959158]
[2025-07-07 05:31:00] 2025-07-07 12:30:26,740 | INFO     | zombie collector waiting for pid 3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:26,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-07 05:31:00] 2025-07-07 12:30:26,740 | INFO     | collected zombie processes
[2025-07-07 05:31:00] 2025-07-07 12:30:26,740 | INFO     | will attempt to kill all subprocesses of pid=3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:27,153 | INFO     | process IDs to be killed: [3959158] (in reverse order)
[2025-07-07 05:31:00] 2025-07-07 12:30:27,224 | WARNING  | found no corresponding commands to process id(s)
[2025-07-07 05:31:00] 2025-07-07 12:30:27,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-07 05:31:00] 2025-07-07 12:30:27,233 | INFO     | did not find any defunct processes belonging to 3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:27,267 | INFO     | did not find any defunct processes belonging to 3959158
[2025-07-07 05:31:00] 2025-07-07 12:30:27,312 | INFO     | ready for new job
[2025-07-07 05:31:00] 2025-07-07 12:30:27,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-07 05:31:00] 2025-07-07 12:30:27,313 | INFO     | ***************************************
[2025-07-07 05:31:00] 2025-07-07 12:30:27,314 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-07 05:31:00] 2025-07-07 12:30:27,314 | INFO     | ***************************************
[2025-07-07 05:31:00] 2025-07-07 12:30:27,314 | INFO     | 
[2025-07-07 05:31:00] 2025-07-07 12:30:27,315 | INFO     | architecture information:
[2025-07-07 05:31:00] 2025-07-07 12:30:27,335 | INFO     | executing command: cat /etc/os-release
[2025-07-07 05:31:00] 2025-07-07 12:30:27,514 | INFO     | cat /etc/os-release:
[2025-07-07 05:31:00] NAME="CentOS Linux"
[2025-07-07 05:31:00] VERSION="7 (Core)"
[2025-07-07 05:31:00] ID="centos"
[2025-07-07 05:31:00] ID_LIKE="rhel fedora"
[2025-07-07 05:31:00] VERSION_ID="7"
[2025-07-07 05:31:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-07 05:31:00] ANSI_COLOR="0;31"
[2025-07-07 05:31:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-07 05:31:00] HOME_URL="https://www.centos.org/"
[2025-07-07 05:31:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-07 05:31:00] 
[2025-07-07 05:31:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-07 05:31:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-07 05:31:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-07 05:31:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-07 05:31:00] 
[2025-07-07 05:31:00] 2025-07-07 12:30:27,514 | INFO     | ***************************************
[2025-07-07 05:31:00] 2025-07-07 12:30:28,018 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-07 05:31:00] 2025-07-07 12:30:28,062 | INFO     | sufficient remaining disk space (1918647664640 B)
[2025-07-07 05:31:00] 2025-07-07 12:30:28,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-07 05:31:00] 2025-07-07 12:30:28,063 | INFO     | current server update state: UPDATING_FINAL
[2025-07-07 05:31:00] 2025-07-07 12:30:28,063 | INFO     | update_server=False
[2025-07-07 05:31:00] 2025-07-07 12:30:28,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-07 05:31:00] 2025-07-07 12:30:28,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-07 05:31:00] 2025-07-07 12:30:28,378 | INFO     | all job control threads have been joined
[2025-07-07 05:31:00] 2025-07-07 12:30:28,484 | INFO     | all data control threads have been joined
[2025-07-07 05:31:00] 2025-07-07 12:30:28,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-07 05:31:00] 2025-07-07 12:30:28,701 | INFO     | aborting loop
[2025-07-07 05:31:00] 2025-07-07 12:30:29,071 | INFO     | [job] retrieve thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,188 | INFO     | [payload] failed_post thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,356 | INFO     | [job] create_data_payload thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,384 | INFO     | [job] control thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,455 | INFO     | [payload] validate_pre thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,490 | INFO     | [data] control thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,505 | INFO     | [payload] execute_payloads thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,554 | INFO     | all payload control threads have been joined
[2025-07-07 05:31:00] 2025-07-07 12:30:29,618 | INFO     | [payload] validate_post thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:29,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-07 05:31:00] 2025-07-07 12:30:29,707 | INFO     | [job] job monitor thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:30,081 | INFO     | [data] copytool_out thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:30,092 | INFO     | [data] copytool_in thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:30,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-07 05:31:00] 2025-07-07 12:30:30,554 | INFO     | [job] validate thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:30,560 | INFO     | [payload] control thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:31,545 | INFO     | [job] queue monitor thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:33,649 | INFO     | [data] queue_monitor thread has finished
[2025-07-07 05:31:00] 2025-07-07 12:30:33,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150798587712)>', '<ExcThread(monitor, started 140150403225344)>']
[2025-07-07 05:31:00] 2025-07-07 12:30:38,807 | INFO     | all workflow threads have been joined
[2025-07-07 05:31:00] 2025-07-07 12:30:38,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-07 05:31:00] 2025-07-07 12:30:38,807 | INFO     | traces error code: 0
[2025-07-07 05:31:00] 2025-07-07 12:30:38,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-07 05:31:00] 2025-07-07 12:30:59,135 | INFO     | PID=3952470 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-07 05:31:00] 2025-07-07 12:30:59,136 | INFO     | .. there are 27 such processes running
[2025-07-07 05:31:00] 2025-07-07 12:30:59,136 | INFO     | found 0 job(s) in 20 queues
[2025-07-07 05:31:00] 2025-07-07 12:30:59,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-07 05:31:00] 2025-07-07 12:30:59,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-07 05:31:00] 2025-07-07 12:30:59,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-07 05:31:00] 2025-07-07 12:30:59,137 | INFO     | [monitor] control thread has ended
[2025-07-07 05:31:00] 2025-07-07 12:30:59,269 [wrapper] ==== pilot stdout END ====
[2025-07-07 05:31:00] 2025-07-07 12:30:59,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-07 05:31:00] 2025-07-07 12:30:59,295 [wrapper] pilotpid: 3952470
[2025-07-07 05:31:00] 2025-07-07 12:30:59,304 [wrapper] Pilot exit status: 0
[2025-07-07 05:31:00] 2025-07-07 12:30:59,421 [wrapper] pandaids: 6722621700
[2025-07-07 05:31:00] 2025-07-07 12:30:59,710 [wrapper] cleanup supervisor_pilot 3952476 3952471
[2025-07-07 05:31:00] 2025-07-07 12:30:59,735 [wrapper] Test setup, not cleaning
[2025-07-07 05:31:00] 2025-07-07 12:30:59,752 [wrapper] apfmon messages muted
[2025-07-07 05:31:00] 2025-07-07 12:30:59,787 [wrapper] ==== wrapper stdout END ====
[2025-07-07 05:31:00] 2025-07-07 12:30:59,809 [wrapper] ==== wrapper stderr END ====
[2025-07-07 05:31:00]  *** Error codes and diagnostics ***
[2025-07-07 05:31:00]     "exeErrorCode": 65,
[2025-07-07 05:31:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-07 05:31:00]     "pilotErrorCode": 1305,
[2025-07-07 05:31:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-07 05:31:00]  *** Listing of results directory ***
[2025-07-07 05:31:00] total 311824
[2025-07-07 05:31:00] -rwx------. 1 boinc boinc     36292 Jul  7 03:18 runpilot2-wrapper.sh
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc      5112 Jul  7 03:18 queuedata.json
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc    530466 Jul  7 03:18 pilot3.tar.gz
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc       100 Jul  7 05:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-07 05:31:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul  7 05:26 run_atlas
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc       105 Jul  7 05:26 job.xml
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc 315254813 Jul  7 05:26 EVNT.45482135._000188.pool.root.1
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc      6597 Jul  7 05:26 init_data.xml
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc     15095 Jul  7 05:26 start_atlas.sh
[2025-07-07 05:31:00] drwxrwx--x. 2 boinc boinc      4096 Jul  7 05:26 shared
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc    542874 Jul  7 05:26 input.tar.gz
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc         0 Jul  7 05:26 boinc_lockfile
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc      2544 Jul  7 05:26 pandaJob.out
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc    970740 Jul  7 05:26 agis_schedconf.cvmfs.json
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc   1573983 Jul  7 05:26 agis_ddmendpoints.agis.ALL.json
[2025-07-07 05:31:00] drwx------. 4 boinc boinc      4096 Jul  7 05:26 pilot3
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc       524 Jul  7 05:28 boinc_task_state.xml
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc       953 Jul  7 05:28 memory_monitor_summary.json
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc     21535 Jul  7 05:28 log.45482137._008276.job.log.tgz.1
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc      8384 Jul  7 05:30 heartbeat.json
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc      8192 Jul  7 05:30 boinc_mmap_file
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc        22 Jul  7 05:30 wrapper_checkpoint.txt
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc        95 Jul  7 05:30 pilot_heartbeat.json
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc       823 Jul  7 05:30 pilotlog.txt
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc     79820 Jul  7 05:30 log.45482137._008276.job.log.1
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc       188 Jul  7 05:31 output.list
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc       620 Jul  7 05:31 runtime_log
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc    122880 Jul  7 05:31 result.tar.gz
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc      8485 Jul  7 05:31 runtime_log.err
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc       644 Jul  7 05:31 DhkNDmd6xs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuCFLDm9CZUcn.diag
[2025-07-07 05:31:00] -rw-r--r--. 1 boinc boinc     21801 Jul  7 05:31 stderr.txt
[2025-07-07 05:31:00] No HITS result produced
[2025-07-07 05:31:00]  *** Contents of shared directory: ***
[2025-07-07 05:31:00] total 308540
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc 315254813 Jul  7 05:26 ATLAS.root_0
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc     15095 Jul  7 05:26 start_atlas.sh
[2025-07-07 05:31:00] -rw-r--r--. 2 boinc boinc    542874 Jul  7 05:26 input.tar.gz
[2025-07-07 05:31:00] -rw-------. 1 boinc boinc    122880 Jul  7 05:31 result.tar.gz
05:31:01 (3948863): run_atlas exited; CPU time 25.851944
05:31:01 (3948863): called boinc_finish(0)

</stderr_txt>
]]>

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