Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-12 04:59:37 (1640): Detected: vboxwrapper 26206
2025-07-12 04:59:37 (1640): Detected: BOINC client v8.0.2
2025-07-12 04:59:37 (1640): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2025-07-12 04:59:38 (1640): Successfully copied 'init_data.xml' to the shared directory.
2025-07-12 04:59:38 (1640): Create VM. (boinc_bd8792c0de83b473, slot#0)
2025-07-12 04:59:39 (1640): Setting Memory Size for VM. (4400MB)
2025-07-12 04:59:39 (1640): Setting CPU Count for VM. (4)
2025-07-12 04:59:39 (1640): Setting Chipset Options for VM.
2025-07-12 04:59:39 (1640): Setting Graphics Controller Options for VM.
2025-07-12 04:59:40 (1640): Setting Boot Options for VM.
2025-07-12 04:59:40 (1640): Setting Network Configuration for NAT.
2025-07-12 04:59:40 (1640): Enabling VM Network Access.
2025-07-12 04:59:40 (1640): Disabling USB Support for VM.
2025-07-12 04:59:41 (1640): Disabling COM Port Support for VM.
2025-07-12 04:59:41 (1640): Disabling LPT Port Support for VM.
2025-07-12 04:59:41 (1640): Disabling Audio Support for VM.
2025-07-12 04:59:42 (1640): Disabling Clipboard Support for VM.
2025-07-12 04:59:42 (1640): Disabling Drag and Drop Support for VM.
2025-07-12 04:59:42 (1640): Adding storage controller(s) to VM.
2025-07-12 04:59:42 (1640): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-12 04:59:43 (1640): Adding VirtualBox Guest Additions to VM.
2025-07-12 04:59:43 (1640): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-12 04:59:43 (1640): forwarding host port 51966 to guest port 80
2025-07-12 04:59:44 (1640): Enabling remote desktop for VM.
2025-07-12 04:59:44 (1640): Required extension pack not installed, remote desktop not enabled.
2025-07-12 04:59:44 (1640): Enabling shared directory for VM.
2025-07-12 04:59:44 (1640): Starting VM using VBoxManage interface. (boinc_bd8792c0de83b473, slot#0)
2025-07-12 04:59:48 (1640): Successfully started VM. (PID = '7764')
2025-07-12 04:59:48 (1640): Reporting VM Process ID to BOINC.
2025-07-12 04:59:48 (1640): Guest Log: BIOS: VirtualBox 6.1.34
2025-07-12 04:59:48 (1640): Guest Log: CPUID EDX: 0x178bfbff
2025-07-12 04:59:48 (1640): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-12 04:59:48 (1640): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-12 04:59:48 (1640): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-12 04:59:48 (1640): Detected: Web Application Enabled (http://localhost:51966)
2025-07-12 04:59:48 (1640): Preference change detected
2025-07-12 04:59:48 (1640): Setting CPU throttle for VM. (100%)
2025-07-12 04:59:49 (1640): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-12 04:59:50 (1640): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-12 04:59:50 (1640): Guest Log: BIOS: Booting from Hard Disk...
2025-07-12 04:59:53 (1640): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-12 04:59:53 (1640): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-12 04:59:53 (1640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-12 05:00:00 (1640): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-12 05:00:00 (1640): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-12 05:00:05 (1640): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000163 main     Log opened 2025-07-12T05:00:03.760462000Z
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000262 main     OS Product: Linux
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000297 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000321 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000342 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000343 main     Process ID: 1315
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.000344 main     Package type: LINUX_64BITS_GENERIC
2025-07-12 05:00:05 (1640): Guest Log: 00:00:00.001219 main     5.2.32 r132073 started. Verbose level = 0
2025-07-12 05:00:05 (1640): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-12 05:00:05 (1640): Guest Log: [INFO] Mounting shared directory
2025-07-12 05:00:05 (1640): Guest Log: [INFO] Checking for init_data.xml
2025-07-12 05:00:11 (1640): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-12 05:00:11 (1640): Guest Log: [INFO] Detected branch: prod
2025-07-12 05:00:11 (1640): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-12 05:00:11 (1640): Guest Log: Copying input files
2025-07-12 05:00:12 (1640): Guest Log: Copied input files into RunAtlas.
2025-07-12 05:00:13 (1640): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-12 05:00:13 (1640): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-12 05:00:13 (1640): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-12 05:00:13 (1640): Guest Log: Further information can be found at the LHC@home message board.
2025-07-12 05:00:15 (1640): Guest Log: 00:00:10.037105 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 511 581 000ns (GuestNow=1 752 289 215 252 887 000 ns GuestLast=1 752 296 403 764 468 000 ns fSetTimeLastLoop=true )
2025-07-12 05:00:22 (1640): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-12 05:00:23 (1640): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-12 05:00:23 (1640): Guest Log: 2.6.3.0 1594 0 32044 148227 4 1 3117618 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-12 05:00:23 (1640): Guest Log: copied the webapp to /var/www
2025-07-12 05:00:23 (1640): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-12 05:00:23 (1640): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-12 05:00:24 (1640): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-12 05:00:24 (1640): Guest Log:  *** Starting ATLAS job. (PandaID=6721259641 taskID=45482062) ***
2025-07-12 06:39:56 (1640): Status Report: Elapsed Time: '6000.000000'
2025-07-12 06:39:56 (1640): Status Report: CPU Time: '21936.421875'
2025-07-12 08:20:04 (1640): Status Report: Elapsed Time: '12000.000000'
2025-07-12 08:20:04 (1640): Status Report: CPU Time: '45605.046875'
2025-07-12 10:00:13 (1640): Status Report: Elapsed Time: '18000.000000'
2025-07-12 10:00:13 (1640): Status Report: CPU Time: '69271.375000'
2025-07-12 10:51:46 (1640): Guest Log:  *** Job finished ***
2025-07-12 10:51:46 (1640): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:20,472 | INFO     | all workflow threads have been joined
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:20,473 | INFO     | end of generic workflow (traces error code: 0)
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:20,473 | INFO     | traces error code: 0
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:20,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,276 | INFO     | PID=5896 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,277 | INFO     | found 0 job(s) in 20 queues
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,278 | INFO     | [monitor] control thread has ended
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,367 [wrapper] ==== pilot stdout END ====
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,371 [wrapper] ==== wrapper stdout RESUME ====
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,375 [wrapper] pilotpid: 5896
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,379 [wrapper] Pilot exit status: 0
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,432 [wrapper] pandaids: 6721259641
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,456 [wrapper] cleanup supervisor_pilot 24283 5897
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,460 [wrapper] Test setup, not cleaning
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,464 [wrapper] apfmon messages muted
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,468 [wrapper] ==== wrapper stdout END ====
2025-07-12 10:51:46 (1640): Guest Log: 2025-07-12 08:51:41,472 [wrapper] ==== wrapper stderr END ====
2025-07-12 10:51:46 (1640): Guest Log:  *** Error codes and diagnostics ***
2025-07-12 10:51:46 (1640): Guest Log:     "exeErrorCode": 0,
2025-07-12 10:51:46 (1640): Guest Log:     "exeErrorDiag": "",
2025-07-12 10:51:46 (1640): Guest Log:     "pilotErrorCode": 0,
2025-07-12 10:51:46 (1640): Guest Log:     "pilotErrorDiag": "",
2025-07-12 10:51:46 (1640): Guest Log:  *** Listing of results directory ***
2025-07-12 10:51:46 (1640): Guest Log: total 269272
2025-07-12 10:51:46 (1640): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul  7 03:55 pilot3.tar.gz
2025-07-12 10:51:46 (1640): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul  7 04:13 queuedata.json
2025-07-12 10:51:46 (1640): Guest Log: -rwx------. 1 atlas atlas     36292 Jul  7 04:15 runpilot2-wrapper.sh
2025-07-12 10:51:46 (1640): Guest Log: -rwxr-xr-x. 1 atlas atlas      9231 Jul 12 03:00 init_data.xml
2025-07-12 10:51:46 (1640): Guest Log: -rwxr-xr-x. 1 atlas atlas    542886 Jul 12 03:00 input.tar.gz
2025-07-12 10:51:46 (1640): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 12 03:00 start_atlas.sh
2025-07-12 10:51:46 (1640): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 12 03:00 EVNT.45482060._000629.pool.root.1 -> /data/./ATLAS.root_0
2025-07-12 10:51:46 (1640): Guest Log: -rw-r--r--. 1 atlas atlas      2534 Jul 12 03:00 pandaJob.out
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas    976223 Jul 12 03:00 agis_schedconf.cvmfs.json
2025-07-12 10:51:46 (1640): Guest Log: drwx------. 4 atlas atlas      4096 Jul 12 03:01 pilot3
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas 267693442 Jul 12 08:50 HITS.45482062._015848.pool.root.1
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas      1033 Jul 12 08:50 memory_monitor_summary.json
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas   1588641 Jul 12 08:50 agis_ddmendpoints.agis.ALL.json
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas    392613 Jul 12 08:50 log.45482062._015848.job.log.tgz.1
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas      7835 Jul 12 08:51 heartbeat.json
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas        95 Jul 12 08:51 pilot_heartbeat.json
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas       744 Jul 12 08:51 pilotlog.txt
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas   1726428 Jul 12 08:51 log.45482062._015848.job.log.1
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas       357 Jul 12 08:51 output.list
2025-07-12 10:51:46 (1640): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 12 08:51 runtime_log
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas   2140160 Jul 12 08:51 result.tar.gz
2025-07-12 10:51:46 (1640): Guest Log: -rw-r--r--. 1 atlas atlas      8600 Jul 12 08:51 runtime_log.err
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas       659 Jul 12 08:51 cy4NDmwRss7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsBELDmRzsPUm.diag
2025-07-12 10:51:46 (1640): Guest Log: Looking for outputfile HITS.45482062._015848.pool.root.1
2025-07-12 10:51:46 (1640): Guest Log: HITS file was successfully produced
2025-07-12 10:51:46 (1640): Guest Log: -rw-------. 1 atlas atlas 267693442 Jul 12 08:50 /home/atlas/RunAtlas/HITS.45482062._015848.pool.root.1
2025-07-12 10:51:47 (1640): Guest Log: Successfully finished the ATLAS job!
2025-07-12 10:51:47 (1640): Guest Log: Copying the results back to the shared directory!
2025-07-12 10:51:47 (1640): Guest Log:  *** Contents of shared directory: ***
2025-07-12 10:51:47 (1640): Guest Log: total 573896
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root 317257777 Jul 12 02:59 ATLAS.root_0
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root 267693442 Jul 12 08:51 HITS.pool.root.1
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root      9231 Jul 12 02:59 init_data.xml
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root    542886 Jul  7 11:27 input.tar.gz
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root   2140160 Jul 12 08:51 result.tar.gz
2025-07-12 10:51:47 (1640): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul  7 11:27 start_atlas.sh
2025-07-12 10:51:47 (1640): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-12 10:51:47 (1640): VM Completion File Detected.
2025-07-12 10:51:47 (1640): Powering off VM.
2025-07-12 10:51:47 (1640): Successfully stopped VM.
2025-07-12 10:51:47 (1640): Deregistering VM. (boinc_bd8792c0de83b473, slot#0)
2025-07-12 10:51:47 (1640): Removing network bandwidth throttle group from VM.
2025-07-12 10:51:48 (1640): Removing VM from VirtualBox.
10:51:53 (1640): called boinc_finish(0)

</stderr_txt>
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