Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:34 (2320024): wrapper (7.7.26015): starting
14:26:34 (2320024): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 14:26:34] Arguments: --nthreads 12
[2025-07-06 14:26:34] Threads: 12
[2025-07-06 14:26:34] Checking for CVMFS
[2025-07-06 14:26:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 14:26:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 14:26:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 14:26:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 14:26:36] 2.11.5.0 6741 7443 227920 148018 2 326 41408572 45568001 12212 130560 0 76072333 99.824 38867772 26048 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 14:26:36] CVMFS is ok
[2025-07-06 14:26:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 14:26:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 14:26:36] Further information can be found at the LHC@home message board.
[2025-07-06 14:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 14:26:36] Checking for apptainer binary...
[2025-07-06 14:26:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 14:26:36] Running /usr/bin/apptainer --version
[2025-07-06 14:26:36] apptainer version 1.4.1-1.el9
[2025-07-06 14:26:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 14:26:37] wns0090.triumf.lcg
[2025-07-06 14:26:37] apptainer works
[2025-07-06 14:26:37] Set ATHENA_PROC_NUMBER=12
[2025-07-06 14:26:37] Set ATHENA_CORE_NUMBER=12
[2025-07-06 14:26:37] Starting ATLAS job with PandaID=6720782362
[2025-07-06 14:26:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 14:32:02]  *** The last 200 lines of the pilot log: ***
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | wrong length of table data, x=[1751837319.0], y=[1895.0] (must be same and length>=4)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | could have reported an average CPU frequency of 2681 MHz (4 samples)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . Timing measurements:
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . get job = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . initial setup = 4 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload setup = 17 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-in = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload execution = 57 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-out = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . log creation = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720782362/pilotlog.txt
[2025-07-06 14:32:02] 2025-07-06 21:31:28,973 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 14:32:02] - Log from pilotlog.txt -
[2025-07-06 14:32:02] 2025-07-06 21:31:28,876 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720782362/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | INFO     | extracted standard info from prmon json
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | wrong length of table data, x=[1751837319.0], y=[1895.0] (must be same and length>=4)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | could have reported an average CPU frequency of 2681 MHz (4 samples)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . Timing measurements:
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . get job = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . initial setup = 4 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload setup = 17 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-in = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload execution = 57 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-out = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . log creation = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720782362/pilotlog.txt
[2025-07-06 14:32:02] 2025-07-06 21:31:28,974 | WARNING  | 
[2025-07-06 14:32:02] [begin log extracts]
[2025-07-06 14:32:02] - Log from pilotlog.txt -
[2025-07-06 14:32:02] 2025-07-06 21:31:28,876 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720782362/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | INFO     | extracted standard info from prmon json
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 14:32:02] 2025-07-06 21:31:28,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 14:32:02] 2025-07-06 21:31:28,907 | WARNING  | wrong length of table data, x=[1751837319.0], y=[1895.0] (must be same and length>=4)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | could have reported an average CPU frequency of 2681 MHz (4 samples)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . Timing measurements:
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . get job = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . initial setup = 4 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload setup = 17 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-in = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . payload execution = 57 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . stage-out = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | . log creation = 0 s
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | ..............................
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 14:32:02] 2025-07-06 21:31:28,908 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720782362/pilotlog.txt
[2025-07-06 14:32:02] [end log extracts]
[2025-07-06 14:32:02] 2025-07-06 21:31:28,974 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 14:32:02] 2025-07-06 21:31:28,975 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | 
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | job summary report
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | --------------------------------------------------
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | PanDA job id: 6720782362
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | task id: 45482062
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 14:28:59,492 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | pilot state: failed 
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | transexitcode: 65
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | exeerrorcode: 65
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | exitcode: 65
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | cpuconsumptiontime: 15 s
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | nevents: 0
[2025-07-06 14:32:02] 2025-07-06 21:31:29,207 | INFO     | neventsw: 0
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | pid: 2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | pgrp: 2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | corecount: 12
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | event service: False
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | sizes: {0: 2366554, 1: 2366582, 12: 2366582, 16: 2366872, 23: 2366900, 78: 2394550, 81: 2394550, 215: 2394716}
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | --------------------------------------------------
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | 
[2025-07-06 14:32:02] 2025-07-06 21:31:29,208 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 14:32:02] 2025-07-06 21:31:29,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | job 6720782362 has completed (purged errors)
[2025-07-06 14:32:02] 2025-07-06 21:31:29,401 | INFO     | overall cleanup function is called
[2025-07-06 14:32:02] 2025-07-06 21:31:30,414 | INFO     | --- collectZombieJob: --- 10, [2329950]
[2025-07-06 14:32:02] 2025-07-06 21:31:30,414 | INFO     | zombie collector waiting for pid 2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:30,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 14:32:02] 2025-07-06 21:31:30,414 | INFO     | collected zombie processes
[2025-07-06 14:32:02] 2025-07-06 21:31:30,414 | INFO     | will attempt to kill all subprocesses of pid=2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:31,162 | INFO     | process IDs to be killed: [2329950] (in reverse order)
[2025-07-06 14:32:02] 2025-07-06 21:31:31,553 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 14:32:02] 2025-07-06 21:31:31,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 14:32:02] 2025-07-06 21:31:31,587 | INFO     | did not find any defunct processes belonging to 2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:31,681 | INFO     | did not find any defunct processes belonging to 2329950
[2025-07-06 14:32:02] 2025-07-06 21:31:31,682 | INFO     | ready for new job
[2025-07-06 14:32:02] 2025-07-06 21:31:31,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 14:32:02] 2025-07-06 21:31:31,683 | INFO     | ***************************************
[2025-07-06 14:32:02] 2025-07-06 21:31:31,683 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 14:32:02] 2025-07-06 21:31:31,683 | INFO     | ***************************************
[2025-07-06 14:32:02] 2025-07-06 21:31:31,683 | INFO     | 
[2025-07-06 14:32:02] 2025-07-06 21:31:31,725 | INFO     | architecture information:
[2025-07-06 14:32:02] 2025-07-06 21:31:31,730 | INFO     | executing command: cat /etc/os-release
[2025-07-06 14:32:02] 2025-07-06 21:31:31,820 | INFO     | cat /etc/os-release:
[2025-07-06 14:32:02] NAME="CentOS Linux"
[2025-07-06 14:32:02] VERSION="7 (Core)"
[2025-07-06 14:32:02] ID="centos"
[2025-07-06 14:32:02] ID_LIKE="rhel fedora"
[2025-07-06 14:32:02] VERSION_ID="7"
[2025-07-06 14:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 14:32:02] ANSI_COLOR="0;31"
[2025-07-06 14:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 14:32:02] HOME_URL="https://www.centos.org/"
[2025-07-06 14:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 14:32:02] 
[2025-07-06 14:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 14:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 14:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 14:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 14:32:02] 
[2025-07-06 14:32:02] 2025-07-06 21:31:31,820 | INFO     | ***************************************
[2025-07-06 14:32:02] 2025-07-06 21:31:32,324 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 14:32:02] 2025-07-06 21:31:32,370 | INFO     | sufficient remaining disk space (1810200788992 B)
[2025-07-06 14:32:02] 2025-07-06 21:31:32,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 14:32:02] 2025-07-06 21:31:32,370 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 14:32:02] 2025-07-06 21:31:32,370 | INFO     | update_server=False
[2025-07-06 14:32:02] 2025-07-06 21:31:32,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 14:32:02] 2025-07-06 21:31:32,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 14:32:02] 2025-07-06 21:31:32,693 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-06 14:32:02] 2025-07-06 21:31:32,693 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-06 14:32:02] 2025-07-06 21:31:32,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 14:32:02] 2025-07-06 21:31:32,693 | INFO     | will abort loop
[2025-07-06 14:32:02] 2025-07-06 21:31:32,869 | INFO     | all data control threads have been joined
[2025-07-06 14:32:02] 2025-07-06 21:31:33,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 14:32:02] 2025-07-06 21:31:33,379 | INFO     | [job] retrieve thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:33,437 | INFO     | [data] copytool_in thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:33,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:33,698 | INFO     | [job] job monitor thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:33,702 | INFO     | all payload control threads have been joined
[2025-07-06 14:32:02] 2025-07-06 21:31:33,801 | INFO     | all job control threads have been joined
[2025-07-06 14:32:02] 2025-07-06 21:31:33,875 | INFO     | [data] control thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 14:32:02] 2025-07-06 21:31:34,394 | INFO     | [payload] failed_post thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,411 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,640 | INFO     | [payload] validate_post thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,667 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,703 | INFO     | [job] validate thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,708 | INFO     | [payload] control thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,716 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:34,808 | INFO     | [job] control thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:35,215 | INFO     | [data] copytool_out thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:35,226 | INFO     | [job] queue monitor thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:36,380 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 14:32:02] 2025-07-06 21:31:37,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115441805120)>', '<ExcThread(monitor, started 140114743240448)>']
[2025-07-06 14:32:02] 2025-07-06 21:31:42,589 | INFO     | all workflow threads have been joined
[2025-07-06 14:32:02] 2025-07-06 21:31:42,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 14:32:02] 2025-07-06 21:31:42,589 | INFO     | traces error code: 0
[2025-07-06 14:32:02] 2025-07-06 21:31:42,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 14:32:02] 2025-07-06 21:32:01,191 | INFO     | PID=2323600 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | INFO     | .. there are 14 such processes running
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 14:32:02] 2025-07-06 21:32:01,192 | INFO     | [monitor] control thread has ended
[2025-07-06 14:32:02] 2025-07-06 21:32:01,303 [wrapper] ==== pilot stdout END ====
[2025-07-06 14:32:02] 2025-07-06 21:32:01,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 14:32:02] 2025-07-06 21:32:01,308 [wrapper] pilotpid: 2323600
[2025-07-06 14:32:02] 2025-07-06 21:32:01,310 [wrapper] Pilot exit status: 0
[2025-07-06 14:32:02] 2025-07-06 21:32:01,347 [wrapper] pandaids: 6720782362
[2025-07-06 14:32:02] 2025-07-06 21:32:01,578 [wrapper] cleanup supervisor_pilot 2323606 2323601
[2025-07-06 14:32:02] 2025-07-06 21:32:01,593 [wrapper] Test setup, not cleaning
[2025-07-06 14:32:02] 2025-07-06 21:32:01,626 [wrapper] apfmon messages muted
[2025-07-06 14:32:02] 2025-07-06 21:32:01,662 [wrapper] ==== wrapper stdout END ====
[2025-07-06 14:32:02] 2025-07-06 21:32:01,714 [wrapper] ==== wrapper stderr END ====
[2025-07-06 14:32:02]  *** Error codes and diagnostics ***
[2025-07-06 14:32:02]     "exeErrorCode": 65,
[2025-07-06 14:32:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 14:32:02]     "pilotErrorCode": 1305,
[2025-07-06 14:32:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 14:32:02]  *** Listing of results directory ***
[2025-07-06 14:32:02] total 314064
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc    530466 Jul  6 05:47 pilot3.tar.gz
[2025-07-06 14:32:02] -rwx------. 1 boinc boinc     36292 Jul  6 05:50 runpilot2-wrapper.sh
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc      5112 Jul  6 05:50 queuedata.json
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc       100 Jul  6 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 14:32:02] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 14:26 run_atlas
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc       105 Jul  6 14:26 job.xml
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc 317549094 Jul  6 14:26 EVNT.45482060._000407.pool.root.1
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc     15095 Jul  6 14:26 start_atlas.sh
[2025-07-06 14:32:02] drwxrwx--x. 2 boinc boinc      4096 Jul  6 14:26 shared
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc    542882 Jul  6 14:26 input.tar.gz
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc      6598 Jul  6 14:26 init_data.xml
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc         0 Jul  6 14:26 boinc_lockfile
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc      2534 Jul  6 14:26 pandaJob.out
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc    970025 Jul  6 14:27 agis_schedconf.cvmfs.json
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc   1574083 Jul  6 14:27 agis_ddmendpoints.agis.ALL.json
[2025-07-06 14:32:02] drwx------. 4 boinc boinc      4096 Jul  6 14:27 pilot3
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc       523 Jul  6 14:28 boinc_task_state.xml
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc       944 Jul  6 14:29 memory_monitor_summary.json
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc     21326 Jul  6 14:29 log.45482062._010171.job.log.tgz.1
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc        95 Jul  6 14:31 pilot_heartbeat.json
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc      8388 Jul  6 14:31 heartbeat.json
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc       823 Jul  6 14:32 pilotlog.txt
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc        22 Jul  6 14:32 wrapper_checkpoint.txt
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc     81240 Jul  6 14:32 log.45482062._010171.job.log.1
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc      8192 Jul  6 14:32 boinc_mmap_file
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc       188 Jul  6 14:32 output.list
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc       620 Jul  6 14:32 runtime_log
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc    122880 Jul  6 14:32 result.tar.gz
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc      8485 Jul  6 14:32 runtime_log.err
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc       644 Jul  6 14:32 FMDNDmB0ds7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8rqKDmIzul2n.diag
[2025-07-06 14:32:02] -rw-r--r--. 1 boinc boinc     21764 Jul  6 14:32 stderr.txt
[2025-07-06 14:32:02] No HITS result produced
[2025-07-06 14:32:02]  *** Contents of shared directory: ***
[2025-07-06 14:32:02] total 310780
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc 317549094 Jul  6 14:26 ATLAS.root_0
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc     15095 Jul  6 14:26 start_atlas.sh
[2025-07-06 14:32:02] -rw-r--r--. 2 boinc boinc    542882 Jul  6 14:26 input.tar.gz
[2025-07-06 14:32:02] -rw-------. 1 boinc boinc    122880 Jul  6 14:32 result.tar.gz
14:32:03 (2320024): run_atlas exited; CPU time 25.639731
14:32:03 (2320024): called boinc_finish(0)

</stderr_txt>
]]>

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