| Name | 3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm_1 |
| Workunit | 233497319 |
| Created | 6 Jul 2025, 12:24:08 UTC |
| Sent | 6 Jul 2025, 16:14:13 UTC |
| Report deadline | 14 Jul 2025, 16:14:13 UTC |
| Received | 12 Jul 2025, 0:08:29 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10854941 |
| Run time | 3 hours 22 min 33 sec |
| CPU time | 1 days 3 hours 33 min 19 sec |
| Validate state | Valid |
| Credit | 623.66 |
| Device peak FLOPS | 14.16 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.52 GB |
| Peak swap size | 2.85 GB |
| Peak disk usage | 1.15 GB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:55:01 (2538344): wrapper (7.7.26015): starting
17:55:01 (2538344): wrapper: running run_atlas (--nthreads 4)
[2025-07-09 17:55:01] Arguments: --nthreads 4
[2025-07-09 17:55:01] Threads: 4
[2025-07-09 17:55:01] Checking for CVMFS
[2025-07-09 17:55:01] No cvmfs_config command found, will try listing directly
[2025-07-09 17:55:01] CVMFS is ok
[2025-07-09 17:55:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-09 17:55:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-09 17:55:01] Further information can be found at the LHC@home message board.
[2025-07-09 17:55:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-09 17:55:01] Checking for apptainer binary...
[2025-07-09 17:55:01] which: no apptainer in ((null))
[2025-07-09 17:55:01] apptainer is not installed, using version from CVMFS
[2025-07-09 17:55:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-09 17:55:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-09 17:55:02] apptainer works
[2025-07-09 17:55:02] Set ATHENA_PROC_NUMBER=4
[2025-07-09 17:55:02] Set ATHENA_CORE_NUMBER=4
[2025-07-09 17:55:02] Starting ATLAS job with PandaID=6720734378
[2025-07-09 17:55:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:00:00 (4064341): wrapper (7.7.26015): starting
08:00:00 (4064341): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 08:00:00] Arguments: --nthreads 4
[2025-07-11 08:00:00] Threads: 4
[2025-07-11 08:00:00] This job has been restarted, cleaning up previous attempt
[2025-07-11 08:00:00] Checking for CVMFS
[2025-07-11 08:00:00] No cvmfs_config command found, will try listing directly
[2025-07-11 08:00:00] CVMFS is ok
[2025-07-11 08:00:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 08:00:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 08:00:00] Further information can be found at the LHC@home message board.
[2025-07-11 08:00:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 08:00:00] Checking for apptainer binary...
[2025-07-11 08:00:00] which: no apptainer in ((null))
[2025-07-11 08:00:00] apptainer is not installed, using version from CVMFS
[2025-07-11 08:00:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 08:00:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-11 08:00:00] apptainer works
[2025-07-11 08:00:00] Set ATHENA_PROC_NUMBER=4
[2025-07-11 08:00:00] Set ATHENA_CORE_NUMBER=4
[2025-07-11 08:00:00] Starting ATLAS job with PandaID=6720734378
[2025-07-11 08:00:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 08:20:03] Job failed
[2025-07-11 08:20:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 08:20:03] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 08:20:03] + mv ATLAS.root_0 EVNT.45482146._000423.pool.root.1
[2025-07-11 08:20:03] mv: 'ATLAS.root_0' and 'EVNT.45482146._000423.pool.root.1' are the same file
[2025-07-11 08:20:03] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-11 08:20:03] + umask 077
[2025-07-11 08:20:03] ++ date +%s
[2025-07-11 08:20:03] + ACCOUNTING_STARTTIME=1752213600
[2025-07-11 08:20:03] + echo 'Detecting resource accounting method available for the job.'
[2025-07-11 08:20:03] Detecting resource accounting method available for the job.
[2025-07-11 08:20:03] + JOB_ACCOUNTING=
[2025-07-11 08:20:03] + command -v arc-job-cgroup
[2025-07-11 08:20:03] + '[' -z '' ']'
[2025-07-11 08:20:03] + GNU_TIME=/usr/bin/time
[2025-07-11 08:20:03] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-11 08:20:03] Looking for /usr/bin/time tool for accounting measurements
[2025-07-11 08:20:03] + '[' '!' -z /usr/bin/time ']'
[2025-07-11 08:20:03] + /usr/bin/time --version
[2025-07-11 08:20:03] + echo 'GNU time found and will be used for job accounting.'
[2025-07-11 08:20:03] GNU time found and will be used for job accounting.
[2025-07-11 08:20:03] + JOB_ACCOUNTING=gnutime
[2025-07-11 08:20:03] + '[' -z gnutime ']'
[2025-07-11 08:20:03] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 08:20:03] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 08:20:03] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-07-06/BOINC_MCORE/6720734378.out
[2025-07-11 08:20:03] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-07-06/BOINC_MCORE/6720734378.out
[2025-07-11 08:20:03] + export PILOT_NOKILL=YES
[2025-07-11 08:20:03] + PILOT_NOKILL=YES
[2025-07-11 08:20:03] + export GRID_GLOBAL_JOBID=3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 08:20:03] + GRID_GLOBAL_JOBID=3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 08:20:03] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 08:20:03] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 08:20:03] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 08:20:03] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 08:20:03] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 08:20:03] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot28/slots/0
[2025-07-11 08:20:03] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot28/slots/0/log.45482148._010584.job.log.1
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot28/slots/0/log.45482148._010584.job.log.1
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot28/slots/0.diag
[2025-07-11 08:20:03] + '[' '!' -z '' ']'
[2025-07-11 08:20:03] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-11 08:20:03] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-11 08:20:03] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-11 08:20:03] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-11 08:20:03] + '[' '!' -z '' ']'
[2025-07-11 08:20:03] + '[' -z yes ']'
[2025-07-11 08:20:03] ++ pwd
[2025-07-11 08:20:03] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 08:20:03] + runtimeenvironments=
[2025-07-11 08:20:03] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:20:03] + RTE_function_0 1
[2025-07-11 08:20:03] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:20:03] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:20:03] + export BOINC_APP=ATLAS
[2025-07-11 08:20:03] + BOINC_APP=ATLAS
[2025-07-11 08:20:03] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:20:03] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:20:03] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:20:03] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:20:03] + '[' -z 1 ']'
[2025-07-11 08:20:03] + '[' 1 == 1 ']'
[2025-07-11 08:20:03] + shift
[2025-07-11 08:20:03] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 08:20:03] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 08:20:03] + '[' 0 -ne 0 ']'
[2025-07-11 08:20:03] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:20:03] + '[' -f /etc/os-release ']'
[2025-07-11 08:20:03] +++ cat /etc/os-release
[2025-07-11 08:20:03] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-11 08:20:03] +++ NAME='CentOS Linux'
[2025-07-11 08:20:03] +++ VERSION='7 (Core)'
[2025-07-11 08:20:03] +++ ID=centos
[2025-07-11 08:20:03] +++ ID_LIKE='rhel fedora'
[2025-07-11 08:20:03] +++ VERSION_ID=7
[2025-07-11 08:20:03] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-11 08:20:03] +++ ANSI_COLOR='0;31'
[2025-07-11 08:20:03] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-11 08:20:03] +++ HOME_URL=https://www.centos.org/
[2025-07-11 08:20:03] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-11 08:20:03] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-11 08:20:03] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-11 08:20:03] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-11 08:20:03] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-11 08:20:03] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-11 08:20:03] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-11 08:20:03] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-11 08:20:03] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-11 08:20:03] + HOME=/scratch/boinc/var/slot28/slots/0
[2025-07-11 08:20:03] + export HOME
[2025-07-11 08:20:03] + cd /scratch/boinc/var/slot28/slots/0
[2025-07-11 08:20:03] + '[' '!' -z '' ']'
[2025-07-11 08:20:03] + '[' -z '' ']'
[2025-07-11 08:20:03] ++ /bin/hostname -f
[2025-07-11 08:20:03] + nodename=skurut28.grid.cesnet.cz
[2025-07-11 08:20:03] + echo nodename=skurut28.grid.cesnet.cz
[2025-07-11 08:20:03] + echo Processors=2
[2025-07-11 08:20:03] + echo Nodecount=1
[2025-07-11 08:20:03] + echo Benchmark=HEPSPEC:1.0
[2025-07-11 08:20:03] + executable=./runpilot2-wrapper.sh
[2025-07-11 08:20:03] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-11 08:20:03] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-11 08:20:03] ++ head -n 1
[2025-07-11 08:20:03] ++ tr -d '\0'
[2025-07-11 08:20:03] + line1='#!/bin/bash'
[2025-07-11 08:20:03] ++ echo '#!/bin/bash'
[2025-07-11 08:20:03] ++ sed -n 's/^#! *//p'
[2025-07-11 08:20:03] + shebang=/bin/bash
[2025-07-11 08:20:03] ++ echo /bin/bash
[2025-07-11 08:20:03] ++ awk '{print $1}'
[2025-07-11 08:20:03] + interpreter=/bin/bash
[2025-07-11 08:20:03] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-11 08:20:03] + '[' x/bin/bash = x ']'
[2025-07-11 08:20:03] + type /bin/bash
[2025-07-11 08:20:03] + '[' xgnutime = xgnutime ']'
[2025-07-11 08:20:03] + /usr/bin/time -o /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-11 08:20:03] + RESULT=2
[2025-07-11 08:20:03] + sed -i -e /nodename=/d /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 08:20:03] ++ grep domain_name init_data.xml
[2025-07-11 08:20:03] ++ awk -F '>' '{print $2}'
[2025-07-11 08:20:03] ++ awk -F '<' '{print $1}'
[2025-07-11 08:20:03] ++ sed -e 's# #_#g'
[2025-07-11 08:20:03] + hostname=skurut28.grid.cesnet.cz
[2025-07-11 08:20:03] ++ grep user_name init_data.xml
[2025-07-11 08:20:03] ++ awk -F '>' '{print $2}'
[2025-07-11 08:20:03] ++ awk -F '<' '{print $1}'
[2025-07-11 08:20:03] ++ sed -e 's# #_#g'
[2025-07-11 08:20:03] + username=praguelcg2
[2025-07-11 08:20:03] + nodename=praguelcg2@skurut28.grid.cesnet.cz
[2025-07-11 08:20:03] + echo nodename=praguelcg2@skurut28.grid.cesnet.cz
[2025-07-11 08:20:03] + '[' -n 4 ']'
[2025-07-11 08:20:03] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 08:20:03] + echo exitcode=2
[2025-07-11 08:20:03] + runtimeenvironments=
[2025-07-11 08:20:03] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 08:20:03] + RTE_function_0 2
[2025-07-11 08:20:03] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:20:03] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 08:20:03] + export BOINC_APP=ATLAS
[2025-07-11 08:20:03] + BOINC_APP=ATLAS
[2025-07-11 08:20:03] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:20:03] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 08:20:03] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:20:03] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 08:20:03] + '[' -z 2 ']'
[2025-07-11 08:20:03] + '[' 2 == 1 ']'
[2025-07-11 08:20:03] + '[' 0 -ne 0 ']'
[2025-07-11 08:20:03] + echo 'zip all output files'
[2025-07-11 08:20:03] + flist='*.diag '
[2025-07-11 08:20:03] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 08:20:03] + '[' -e ./heartbeat.json ']'
[2025-07-11 08:20:03] + flist='*.diag ./heartbeat.json'
[2025-07-11 08:20:03] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 08:20:03] + '[' -e ./output.list ']'
[2025-07-11 08:20:03] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 08:20:03] + '[' -e ./log.45482148._010584.job.log.1 ']'
[2025-07-11 08:20:03] + flist='*.diag ./heartbeat.json ./log.45482148._010584.job.log.1'
[2025-07-11 08:20:03] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 08:20:03] + '[' -e ./log.45482148._010584.job.log.1 ']'
[2025-07-11 08:20:03] + flist='*.diag ./heartbeat.json ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1'
[2025-07-11 08:20:03] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 08:20:03] + '[' -e ./gmlog/ ']'
[2025-07-11 08:20:03] + '[' -f output.list ']'
[2025-07-11 08:20:03] + tar cvf result.tar.gz 3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag ./heartbeat.json ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1
[2025-07-11 08:20:03] + '[' xgnutime = xcgroup ']'
[2025-07-11 08:20:03] + '[' -n '' ']'
[2025-07-11 08:20:03] + '[' -n '' ']'
[2025-07-11 08:20:03] ++ date +%s
[2025-07-11 08:20:03] + ACCOUNTING_ENDTIME=1752213789
[2025-07-11 08:20:03] ++ date -d '1970-01-01 UTC 1752213600 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 08:20:03] + echo LRMSStartTime=20250711080000Z
[2025-07-11 08:20:03] ++ date -d '1970-01-01 UTC 1752213789 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 08:20:03] + echo LRMSEndTime=20250711080309Z
[2025-07-11 08:20:03] + echo walltime=189
[2025-07-11 08:20:03] + echo exitcode=2
[2025-07-11 08:20:03] + exit 2
[2025-07-11 08:20:03] ./log.45482148._010584.job.log.1
[2025-07-11 08:20:03] ./runtime_log.err
[2025-07-11 08:20:03] ./pilotlog.txt
[2025-07-11 08:20:03] ./PanDA_Pilot-6720734378/PoolFileCatalog.xml
[2025-07-11 08:20:03] ./PanDA_Pilot-6720734378/log.EVNTtoHITS
[2025-07-11 08:20:03] ./PanDA_Pilot-6720734378/prmon.log
[2025-07-11 08:20:03] ./PanDA_Pilot-6720734378/pilotlog.txt
[2025-07-11 08:20:03] ./runtime_log
[2025-07-11 08:20:03] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-11 08:20:03] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-11 08:20:03] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-11 08:20:03] ./pilot3/pilot/util/realtimelogger.py
[2025-07-11 08:20:03] ./pilot3/pilot/util/loggingsupport.py
[2025-07-11 08:20:03] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-11 08:20:03] ./log.45482148._010584.job.log.tgz.1
21:13:21 (419794): wrapper (7.7.26015): starting
21:13:21 (419794): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 21:13:21] Arguments: --nthreads 4
[2025-07-11 21:13:21] Threads: 4
[2025-07-11 21:13:21] This job has been restarted, cleaning up previous attempt
[2025-07-11 21:13:21] Checking for CVMFS
[2025-07-11 21:13:21] No cvmfs_config command found, will try listing directly
[2025-07-11 21:13:21] CVMFS is ok
[2025-07-11 21:13:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 21:13:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 21:13:21] Further information can be found at the LHC@home message board.
[2025-07-11 21:13:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 21:13:21] Checking for apptainer binary...
[2025-07-11 21:13:21] which: no apptainer in ((null))
[2025-07-11 21:13:21] apptainer is not installed, using version from CVMFS
[2025-07-11 21:13:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 21:13:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-11 21:13:21] apptainer works
[2025-07-11 21:13:21] Set ATHENA_PROC_NUMBER=4
[2025-07-11 21:13:21] Set ATHENA_CORE_NUMBER=4
[2025-07-11 21:13:21] Starting ATLAS job with PandaID=6720734378
[2025-07-11 21:13:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-11 21:16:32] Job failed
[2025-07-11 21:16:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 21:16:32] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 21:16:32] + mv ATLAS.root_0 EVNT.45482146._000423.pool.root.1
[2025-07-11 21:16:32] mv: 'ATLAS.root_0' and 'EVNT.45482146._000423.pool.root.1' are the same file
[2025-07-11 21:16:32] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-11 21:16:32] + umask 077
[2025-07-11 21:16:32] ++ date +%s
[2025-07-11 21:16:32] + ACCOUNTING_STARTTIME=1752261201
[2025-07-11 21:16:32] + echo 'Detecting resource accounting method available for the job.'
[2025-07-11 21:16:32] Detecting resource accounting method available for the job.
[2025-07-11 21:16:32] + JOB_ACCOUNTING=
[2025-07-11 21:16:32] + command -v arc-job-cgroup
[2025-07-11 21:16:32] + '[' -z '' ']'
[2025-07-11 21:16:32] + GNU_TIME=/usr/bin/time
[2025-07-11 21:16:32] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-11 21:16:32] Looking for /usr/bin/time tool for accounting measurements
[2025-07-11 21:16:32] + '[' '!' -z /usr/bin/time ']'
[2025-07-11 21:16:32] + /usr/bin/time --version
[2025-07-11 21:16:32] + echo 'GNU time found and will be used for job accounting.'
[2025-07-11 21:16:32] GNU time found and will be used for job accounting.
[2025-07-11 21:16:32] + JOB_ACCOUNTING=gnutime
[2025-07-11 21:16:32] + '[' -z gnutime ']'
[2025-07-11 21:16:32] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 21:16:32] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-11 21:16:32] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-07-06/BOINC_MCORE/6720734378.out
[2025-07-11 21:16:32] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-07-06/BOINC_MCORE/6720734378.out
[2025-07-11 21:16:32] + export PILOT_NOKILL=YES
[2025-07-11 21:16:32] + PILOT_NOKILL=YES
[2025-07-11 21:16:32] + export GRID_GLOBAL_JOBID=3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 21:16:32] + GRID_GLOBAL_JOBID=3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 21:16:32] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 21:16:32] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm
[2025-07-11 21:16:32] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 21:16:32] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-11 21:16:32] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 21:16:32] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot28/slots/0
[2025-07-11 21:16:32] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot28/slots/0/log.45482148._010584.job.log.1
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot28/slots/0/log.45482148._010584.job.log.1
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot28/slots/0.diag
[2025-07-11 21:16:32] + '[' '!' -z '' ']'
[2025-07-11 21:16:32] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-11 21:16:32] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-11 21:16:32] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-11 21:16:32] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-11 21:16:32] + '[' '!' -z '' ']'
[2025-07-11 21:16:32] + '[' -z yes ']'
[2025-07-11 21:16:32] ++ pwd
[2025-07-11 21:16:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 21:16:32] + runtimeenvironments=
[2025-07-11 21:16:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 21:16:32] + RTE_function_0 1
[2025-07-11 21:16:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 21:16:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 21:16:32] + export BOINC_APP=ATLAS
[2025-07-11 21:16:32] + BOINC_APP=ATLAS
[2025-07-11 21:16:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 21:16:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 21:16:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 21:16:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 21:16:32] + '[' -z 1 ']'
[2025-07-11 21:16:32] + '[' 1 == 1 ']'
[2025-07-11 21:16:32] + shift
[2025-07-11 21:16:32] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 21:16:32] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot28/slots/0/
[2025-07-11 21:16:32] + '[' 0 -ne 0 ']'
[2025-07-11 21:16:32] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-11 21:16:32] + '[' -f /etc/os-release ']'
[2025-07-11 21:16:32] +++ cat /etc/os-release
[2025-07-11 21:16:32] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-11 21:16:32] +++ NAME='CentOS Linux'
[2025-07-11 21:16:32] +++ VERSION='7 (Core)'
[2025-07-11 21:16:32] +++ ID=centos
[2025-07-11 21:16:32] +++ ID_LIKE='rhel fedora'
[2025-07-11 21:16:32] +++ VERSION_ID=7
[2025-07-11 21:16:32] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-11 21:16:32] +++ ANSI_COLOR='0;31'
[2025-07-11 21:16:32] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-11 21:16:32] +++ HOME_URL=https://www.centos.org/
[2025-07-11 21:16:32] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-11 21:16:32] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-11 21:16:32] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-11 21:16:32] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-11 21:16:32] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-11 21:16:32] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-11 21:16:32] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-11 21:16:32] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-11 21:16:32] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-11 21:16:32] + HOME=/scratch/boinc/var/slot28/slots/0
[2025-07-11 21:16:32] + export HOME
[2025-07-11 21:16:32] + cd /scratch/boinc/var/slot28/slots/0
[2025-07-11 21:16:32] + '[' '!' -z '' ']'
[2025-07-11 21:16:32] + '[' -z '' ']'
[2025-07-11 21:16:32] ++ /bin/hostname -f
[2025-07-11 21:16:32] + nodename=skurut28.grid.cesnet.cz
[2025-07-11 21:16:32] + echo nodename=skurut28.grid.cesnet.cz
[2025-07-11 21:16:32] + echo Processors=2
[2025-07-11 21:16:32] + echo Nodecount=1
[2025-07-11 21:16:32] + echo Benchmark=HEPSPEC:1.0
[2025-07-11 21:16:32] + executable=./runpilot2-wrapper.sh
[2025-07-11 21:16:32] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-11 21:16:32] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-11 21:16:32] ++ head -n 1
[2025-07-11 21:16:32] ++ tr -d '\0'
[2025-07-11 21:16:32] + line1='#!/bin/bash'
[2025-07-11 21:16:32] ++ echo '#!/bin/bash'
[2025-07-11 21:16:32] ++ sed -n 's/^#! *//p'
[2025-07-11 21:16:32] + shebang=/bin/bash
[2025-07-11 21:16:32] ++ echo /bin/bash
[2025-07-11 21:16:32] ++ awk '{print $1}'
[2025-07-11 21:16:32] + interpreter=/bin/bash
[2025-07-11 21:16:32] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-11 21:16:32] + '[' x/bin/bash = x ']'
[2025-07-11 21:16:32] + type /bin/bash
[2025-07-11 21:16:32] + '[' xgnutime = xgnutime ']'
[2025-07-11 21:16:32] + /usr/bin/time -o /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-11 21:16:32] + RESULT=2
[2025-07-11 21:16:32] + sed -i -e /nodename=/d /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 21:16:32] ++ grep domain_name init_data.xml
[2025-07-11 21:16:32] ++ awk -F '>' '{print $2}'
[2025-07-11 21:16:32] ++ awk -F '<' '{print $1}'
[2025-07-11 21:16:32] ++ sed -e 's# #_#g'
[2025-07-11 21:16:32] + hostname=skurut28.grid.cesnet.cz
[2025-07-11 21:16:32] ++ grep user_name init_data.xml
[2025-07-11 21:16:32] ++ awk -F '>' '{print $2}'
[2025-07-11 21:16:32] ++ awk -F '<' '{print $1}'
[2025-07-11 21:16:32] ++ sed -e 's# #_#g'
[2025-07-11 21:16:32] + username=praguelcg2
[2025-07-11 21:16:32] + nodename=praguelcg2@skurut28.grid.cesnet.cz
[2025-07-11 21:16:32] + echo nodename=praguelcg2@skurut28.grid.cesnet.cz
[2025-07-11 21:16:32] + '[' -n 4 ']'
[2025-07-11 21:16:32] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot28/slots/0/3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-11 21:16:32] + echo exitcode=2
[2025-07-11 21:16:32] + runtimeenvironments=
[2025-07-11 21:16:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-11 21:16:32] + RTE_function_0 2
[2025-07-11 21:16:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 21:16:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-11 21:16:32] + export BOINC_APP=ATLAS
[2025-07-11 21:16:32] + BOINC_APP=ATLAS
[2025-07-11 21:16:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 21:16:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-11 21:16:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 21:16:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-11 21:16:32] + '[' -z 2 ']'
[2025-07-11 21:16:32] + '[' 2 == 1 ']'
[2025-07-11 21:16:32] + '[' 0 -ne 0 ']'
[2025-07-11 21:16:32] + echo 'zip all output files'
[2025-07-11 21:16:32] + flist='*.diag '
[2025-07-11 21:16:32] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 21:16:32] + '[' -e ./heartbeat.json ']'
[2025-07-11 21:16:32] + flist='*.diag ./heartbeat.json'
[2025-07-11 21:16:32] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 21:16:32] + '[' -e ./output.list ']'
[2025-07-11 21:16:32] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 21:16:32] + '[' -e ./log.45482148._010584.job.log.1 ']'
[2025-07-11 21:16:32] + flist='*.diag ./heartbeat.json ./log.45482148._010584.job.log.1'
[2025-07-11 21:16:32] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 21:16:32] + '[' -e ./log.45482148._010584.job.log.1 ']'
[2025-07-11 21:16:32] + flist='*.diag ./heartbeat.json ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1'
[2025-07-11 21:16:32] + for f in ./heartbeat.json ./output.list ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1 ./gmlog/
[2025-07-11 21:16:32] + '[' -e ./gmlog/ ']'
[2025-07-11 21:16:32] + '[' -f output.list ']'
[2025-07-11 21:16:32] + tar cvf result.tar.gz 3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag ./heartbeat.json ./log.45482148._010584.job.log.1 ./log.45482148._010584.job.log.1
[2025-07-11 21:16:32] + '[' xgnutime = xcgroup ']'
[2025-07-11 21:16:32] + '[' -n '' ']'
[2025-07-11 21:16:32] + '[' -n '' ']'
[2025-07-11 21:16:32] ++ date +%s
[2025-07-11 21:16:32] + ACCOUNTING_ENDTIME=1752261389
[2025-07-11 21:16:32] ++ date -d '1970-01-01 UTC 1752261201 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 21:16:32] + echo LRMSStartTime=20250711211321Z
[2025-07-11 21:16:32] ++ date -d '1970-01-01 UTC 1752261389 seconds' +%Y%m%d%H%M%SZ
[2025-07-11 21:16:32] + echo LRMSEndTime=20250711211629Z
[2025-07-11 21:16:32] + echo walltime=188
[2025-07-11 21:16:32] + echo exitcode=2
[2025-07-11 21:16:32] + exit 2
[2025-07-11 21:16:32] ./log.45482148._010584.job.log.1
[2025-07-11 21:16:32] ./runtime_log.err
[2025-07-11 21:16:32] ./pilotlog.txt
[2025-07-11 21:16:32] ./PanDA_Pilot-6720734378/PoolFileCatalog.xml
[2025-07-11 21:16:32] ./PanDA_Pilot-6720734378/log.EVNTtoHITS
[2025-07-11 21:16:32] ./PanDA_Pilot-6720734378/prmon.log
[2025-07-11 21:16:32] ./PanDA_Pilot-6720734378/pilotlog.txt
[2025-07-11 21:16:32] ./runtime_log
[2025-07-11 21:16:32] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-11 21:16:32] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-11 21:16:32] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-07-11 21:16:32] ./pilot3/pilot/util/realtimelogger.py
[2025-07-11 21:16:32] ./pilot3/pilot/util/loggingsupport.py
[2025-07-11 21:16:32] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-11 21:16:32] ./log.45482148._010584.job.log.tgz.1
22:01:48 (464951): wrapper (7.7.26015): starting
22:01:48 (464951): wrapper: running run_atlas (--nthreads 4)
[2025-07-11 22:01:48] Arguments: --nthreads 4
[2025-07-11 22:01:48] Threads: 4
[2025-07-11 22:01:48] This job has been restarted, cleaning up previous attempt
[2025-07-11 22:01:48] Checking for CVMFS
[2025-07-11 22:01:48] No cvmfs_config command found, will try listing directly
[2025-07-11 22:01:48] CVMFS is ok
[2025-07-11 22:01:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-11 22:01:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-11 22:01:48] Further information can be found at the LHC@home message board.
[2025-07-11 22:01:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-11 22:01:48] Checking for apptainer binary...
[2025-07-11 22:01:48] which: no apptainer in ((null))
[2025-07-11 22:01:48] apptainer is not installed, using version from CVMFS
[2025-07-11 22:01:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-11 22:01:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-11 22:01:48] apptainer works
[2025-07-11 22:01:48] Set ATHENA_PROC_NUMBER=4
[2025-07-11 22:01:48] Set ATHENA_CORE_NUMBER=4
[2025-07-11 22:01:48] Starting ATLAS job with PandaID=6720734378
[2025-07-11 22:01:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-12 01:10:16] *** The last 200 lines of the pilot log: ***
[2025-07-12 01:10:16] 2025-07-11 23:09:43,641 | WARNING | GPU info not found in prmon json: 'gpu'
[2025-07-12 01:10:16] 2025-07-11 23:09:43,642 | WARNING | format EVNTtoHITS has no such key: dbData
[2025-07-12 01:10:16] 2025-07-11 23:09:43,642 | WARNING | format EVNTtoHITS has no such key: dbTime
[2025-07-12 01:10:16] 2025-07-11 23:09:43,644 | INFO | fitting pss+swap vs Time
[2025-07-12 01:10:16] 2025-07-11 23:09:43,644 | INFO | sum of square deviations: 1963274020.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | sum of deviations: 3660063256.999998
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | mean x: 1752269750.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | mean y: 2358369.497297297
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | -- intersect: -3264336988.8651447
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | intersect: -3264336988.8651447
[2025-07-12 01:10:16] 2025-07-11 23:09:43,645 | INFO | chi2: 1.8583114816215687
[2025-07-12 01:10:16] 2025-07-11 23:09:43,646 | INFO | sum of square deviations: 1808350185.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,646 | INFO | sum of deviations: 13946144855.500002
[2025-07-12 01:10:16] 2025-07-11 23:09:43,646 | INFO | mean x: 1752269597.5
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | mean y: 2368263.2277777777
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | -- intersect: -13511278504.598713
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | intersect: -13511278504.598713
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | chi2: 1.2042630856479524
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | current chi2=1.2042630856479524 (change=35.19584323952471 %)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,647 | INFO | sum of square deviations: 1661798600.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | sum of deviations: 13502868866.000002
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | mean x: 1752269445.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | mean y: 2367801.8114285716
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | -- intersect: -14235617796.283072
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | intersect: -14235617796.283072
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | chi2: 1.2051168270031796
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | current chi2=1.2051168270031796 (change=-0.07089325957108827 %)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,648 | INFO | right removable region: 174
[2025-07-12 01:10:16] 2025-07-11 23:09:43,649 | INFO | sum of square deviations: 1808350185.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,649 | INFO | sum of deviations: -12668867594.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | mean x: 1752269902.5
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | mean y: 2374067.311111111
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | -- intersect: 12278356655.121552
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | intersect: 12278356655.121552
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | chi2: 0.689080381218547
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | current chi2=0.689080381218547 (change=62.919005342567594 %)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,650 | INFO | sum of square deviations: 1661798600.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | sum of deviations: -9273044686.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | mean x: 1752270055.0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | mean y: 2370521.1314285714
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | -- intersect: 9780257277.05641
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | intersect: 9780257277.05641
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | chi2: 0.6770561752273455
[2025-07-12 01:10:16] 2025-07-11 23:09:43,651 | INFO | current chi2=0.6770561752273455 (change=1.7449642043121667 %)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | left removable region: 20
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | sum of square deviations: 1132458442.5
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | sum of deviations: 1248990341.5000005
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | mean x: 1752270024.5
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | mean y: 2380617.396103896
[2025-07-12 01:10:16] 2025-07-11 23:09:43,652 | INFO | -- intersect: -1930200971.6192205
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | intersect: -1930200971.6192205
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | chi2: 0.0005567163205351354
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | -- intersect: -1930200971.6192205
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | current memory leak: 1.10 B/s (using 154 data points, chi2=0.00)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | could have reported an average CPU frequency of 2687 MHz (10 samples)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | ..............................
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | . Timing measurements:
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | . get job = 0 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,653 | INFO | . initial setup = 0 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | . payload setup = 4 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | . stage-in = 0 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | . payload execution = 11237 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | . stage-out = 0 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | . log creation = 0 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,654 | INFO | ..............................
[2025-07-12 01:10:16] 2025-07-11 23:09:43,711 | INFO |
[2025-07-12 01:10:16] 2025-07-11 23:09:43,711 | INFO | job summary report
[2025-07-12 01:10:16] 2025-07-11 23:09:43,711 | INFO | --------------------------------------------------
[2025-07-12 01:10:16] 2025-07-11 23:09:43,711 | INFO | PanDA job id: 6720734378
[2025-07-12 01:10:16] 2025-07-11 23:09:43,711 | INFO | task id: 45482148
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | errors: (none)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | status: LOG_TRANSFER = DONE
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | pilot state: finished
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | transexitcode: 0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | exeerrorcode: 0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | exeerrordiag:
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | exitcode: 0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,712 | INFO | exitmsg: OK
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | cpuconsumptiontime: 43375 s
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | nevents: 400
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | neventsw: 0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | pid: 475910
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | pgrp: 475910
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | corecount: 4
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | event service: False
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | sizes: {0: 2393415, 1: 2393614, 3: 2393876, 11: 2393904, 11245: 2423269, 11247: 2432317, 11250: 2432501, 11254: 2432695}
[2025-07-12 01:10:16] 2025-07-11 23:09:43,713 | INFO | --------------------------------------------------
[2025-07-12 01:10:16] 2025-07-11 23:09:43,714 | INFO |
[2025-07-12 01:10:16] 2025-07-11 23:09:43,714 | INFO | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-07-12 01:10:16] 2025-07-11 23:09:43,727 | INFO | queue jobs had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue data_in had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue data_out had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,728 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,729 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | queue completed_jobids has 1 job(s)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | queue messages had 0 job(s) [purged]
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | job 6720734378 has completed (purged errors)
[2025-07-12 01:10:16] 2025-07-11 23:09:43,730 | INFO | overall cleanup function is called
[2025-07-12 01:10:16] 2025-07-11 23:09:44,738 | INFO | --- collectZombieJob: --- 10, [475910]
[2025-07-12 01:10:16] 2025-07-11 23:09:44,738 | INFO | zombie collector waiting for pid 475910
[2025-07-12 01:10:16] 2025-07-11 23:09:44,739 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-12 01:10:16] 2025-07-11 23:09:44,739 | INFO | collected zombie processes
[2025-07-12 01:10:16] 2025-07-11 23:09:44,739 | INFO | will attempt to kill all subprocesses of pid=475910
[2025-07-12 01:10:16] 2025-07-11 23:09:44,892 | INFO | process IDs to be killed: [475910] (in reverse order)
[2025-07-12 01:10:16] 2025-07-11 23:09:44,932 | WARNING | found no corresponding commands to process id(s)
[2025-07-12 01:10:16] 2025-07-11 23:09:44,933 | INFO | Do not look for orphan processes in BOINC jobs
[2025-07-12 01:10:16] 2025-07-11 23:09:44,936 | INFO | did not find any defunct processes belonging to 475910
[2025-07-12 01:10:16] 2025-07-11 23:09:44,939 | INFO | did not find any defunct processes belonging to 475910
[2025-07-12 01:10:16] 2025-07-11 23:09:44,939 | INFO | ready for new job
[2025-07-12 01:10:16] 2025-07-11 23:09:44,940 | INFO | pilot has finished with previous job - re-establishing logging
[2025-07-12 01:10:16] 2025-07-11 23:09:44,941 | INFO | ***************************************
[2025-07-12 01:10:16] 2025-07-11 23:09:44,941 | INFO | *** PanDA Pilot version 3.10.4.12 ***
[2025-07-12 01:10:16] 2025-07-11 23:09:44,941 | INFO | ***************************************
[2025-07-12 01:10:16] 2025-07-11 23:09:44,941 | INFO |
[2025-07-12 01:10:16] 2025-07-11 23:09:44,942 | INFO | architecture information:
[2025-07-12 01:10:16] 2025-07-11 23:09:44,943 | INFO | executing command: cat /etc/os-release
[2025-07-12 01:10:16] 2025-07-11 23:09:44,952 | INFO | cat /etc/os-release:
[2025-07-12 01:10:16] NAME="CentOS Linux"
[2025-07-12 01:10:16] VERSION="7 (Core)"
[2025-07-12 01:10:16] ID="centos"
[2025-07-12 01:10:16] ID_LIKE="rhel fedora"
[2025-07-12 01:10:16] VERSION_ID="7"
[2025-07-12 01:10:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-12 01:10:16] ANSI_COLOR="0;31"
[2025-07-12 01:10:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-12 01:10:16] HOME_URL="https://www.centos.org/"
[2025-07-12 01:10:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-12 01:10:16]
[2025-07-12 01:10:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-12 01:10:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-12 01:10:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-12 01:10:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-12 01:10:16]
[2025-07-12 01:10:16] 2025-07-11 23:09:44,952 | INFO | ***************************************
[2025-07-12 01:10:16] 2025-07-11 23:09:45,455 | INFO | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-07-12 01:10:16] 2025-07-11 23:09:45,464 | INFO | sufficient remaining disk space (1678440923136 B)
[2025-07-12 01:10:16] 2025-07-11 23:09:45,464 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | INFO | current server update state: UPDATING_FINAL
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | INFO | update_server=False
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-12 01:10:16] 2025-07-11 23:09:45,465 | INFO | aborting loop
[2025-07-12 01:10:16] 2025-07-11 23:09:45,557 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-12 01:10:16] 2025-07-11 23:09:45,715 | INFO | all payload control threads have been joined
[2025-07-12 01:10:16] 2025-07-11 23:09:45,820 | INFO | all data control threads have been joined
[2025-07-12 01:10:16] 2025-07-11 23:09:46,229 | INFO | all job control threads have been joined
[2025-07-12 01:10:16] 2025-07-11 23:09:46,285 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-12 01:10:16] 2025-07-11 23:09:46,470 | INFO | [job] retrieve thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:46,471 | INFO | [job] queue monitor thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:46,471 | INFO | [job] job monitor thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:46,720 | INFO | [payload] control thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:46,826 | INFO | [data] control thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,073 | INFO | [payload] execute_payloads thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,118 | INFO | [payload] failed_post thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,140 | INFO | [payload] run_realtimelog thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,234 | INFO | [job] control thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,563 | INFO | [data] copytool_out thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,578 | INFO | [data] copytool_in thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,648 | INFO | [job] create_data_payload thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,708 | INFO | [job] validate thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,839 | INFO | [payload] validate_post thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:47,896 | INFO | [payload] validate_pre thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:50,290 | INFO | [data] queue_monitor thread has finished
[2025-07-12 01:10:16] 2025-07-11 23:09:52,065 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22486739060544)>', '<ExcThread(monitor, started 22486032840448)>']
[2025-07-12 01:10:16] 2025-07-11 23:09:57,090 | INFO | all workflow threads have been joined
[2025-07-12 01:10:16] 2025-07-11 23:09:57,091 | INFO | end of generic workflow (traces error code: 0)
[2025-07-12 01:10:16] 2025-07-11 23:09:57,091 | INFO | traces error code: 0
[2025-07-12 01:10:16] 2025-07-11 23:09:57,091 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-07-12 01:10:16] 2025-07-11 23:10:16,035 | INFO | PID=468915 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-12 01:10:16] 2025-07-11 23:10:16,079 | INFO | .. there are 2 such processes running
[2025-07-12 01:10:16] 2025-07-11 23:10:16,079 | INFO | found 0 job(s) in 20 queues
[2025-07-12 01:10:16] 2025-07-11 23:10:16,079 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-12 01:10:16] 2025-07-11 23:10:16,080 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-07-12 01:10:16] 2025-07-11 23:10:16,080 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-07-12 01:10:16] 2025-07-11 23:10:16,080 | CRITICAL | thread 'MainThread' is not alive
[2025-07-12 01:10:16] 2025-07-11 23:10:16,080 | INFO | [monitor] control thread has ended
[2025-07-12 01:10:16] 2025-07-11 23:10:16,152 [wrapper] ==== pilot stdout END ====
[2025-07-12 01:10:16] 2025-07-11 23:10:16,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-12 01:10:16] 2025-07-11 23:10:16,155 [wrapper] pilotpid: 468915
[2025-07-12 01:10:16] 2025-07-11 23:10:16,157 [wrapper] Pilot exit status: 0
[2025-07-12 01:10:16] 2025-07-11 23:10:16,163 [wrapper] pandaids: 6720734378 6720734378 6720734378 6720734378
[2025-07-12 01:10:16] 2025-07-11 23:10:16,188 [wrapper] cleanup supervisor_pilot 673951 468916
[2025-07-12 01:10:16] 2025-07-11 23:10:16,190 [wrapper] Test setup, not cleaning
[2025-07-12 01:10:16] 2025-07-11 23:10:16,192 [wrapper] apfmon messages muted
[2025-07-12 01:10:16] 2025-07-11 23:10:16,193 [wrapper] ==== wrapper stdout END ====
[2025-07-12 01:10:16] 2025-07-11 23:10:16,195 [wrapper] ==== wrapper stderr END ====
[2025-07-12 01:10:16] *** Error codes and diagnostics ***
[2025-07-12 01:10:16] "exeErrorCode": 0,
[2025-07-12 01:10:16] "exeErrorDiag": "",
[2025-07-12 01:10:16] "pilotErrorCode": 0,
[2025-07-12 01:10:16] "pilotErrorDiag": "",
[2025-07-12 01:10:16] *** Listing of results directory ***
[2025-07-12 01:10:16] total 893708
[2025-07-12 01:10:16] drwx------ 4 boinc boinc 4096 Jun 17 12:04 pilot3
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 530466 Jul 6 10:34 pilot3.tar.gz
[2025-07-12 01:10:16] -rwx------ 1 boinc boinc 36292 Jul 6 10:38 runpilot2-wrapper.sh
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 5112 Jul 6 10:38 queuedata.json
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 100 Jul 9 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-12 01:10:16] -rwxr-xr-x 1 boinc boinc 7986 Jul 9 17:54 run_atlas
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 105 Jul 9 17:54 job.xml
[2025-07-12 01:10:16] -rw-r--r-- 3 boinc boinc 321948828 Jul 9 17:55 EVNT.45482146._000423.pool.root.1
[2025-07-12 01:10:16] -rw-r--r-- 3 boinc boinc 321948828 Jul 9 17:55 ATLAS.root_0
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 542901 Jul 9 17:55 input.tar.gz
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 15095 Jul 9 17:55 start_atlas.sh
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 0 Jul 9 17:55 boinc_lockfile
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 0 Jul 11 08:00 wrapper_sigint_4068760
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 0 Jul 11 08:03 wrapper_sigkill_4068760
[2025-07-12 01:10:16] drwxrwx--x 2 boinc boinc 4096 Jul 11 08:20 shared
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 0 Jul 11 21:13 wrapper_sigint_423765
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 0 Jul 11 21:16 wrapper_sigkill_423765
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 6428 Jul 11 22:01 init_data.xml
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 2616 Jul 11 22:01 pandaJob.out
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 976215 Jul 11 22:01 agis_schedconf.cvmfs.json
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 264543037 Jul 12 01:09 HITS.45482148._010584.pool.root.1
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 531 Jul 12 01:09 boinc_task_state.xml
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 1046 Jul 12 01:09 memory_monitor_summary.json
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 1588641 Jul 12 01:09 agis_ddmendpoints.agis.ALL.json
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 323692 Jul 12 01:09 log.45482148._010584.job.log.tgz.1
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 7854 Jul 12 01:09 heartbeat.json
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 8192 Jul 12 01:09 boinc_mmap_file
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 28 Jul 12 01:09 wrapper_checkpoint.txt
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 891 Jul 12 01:10 pilotlog.txt
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 99 Jul 12 01:10 pilot_heartbeat.json
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 1083996 Jul 12 01:10 log.45482148._010584.job.log.1
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 357 Jul 12 01:10 output.list
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 620 Jul 12 01:10 runtime_log
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 1423360 Jul 12 01:10 result.tar.gz
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 9104 Jul 12 01:10 runtime_log.err
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 2004 Jul 12 01:10 3W2MDm53Zs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6JCLDmoY8kqm.diag
[2025-07-12 01:10:16] -rw-r--r-- 1 boinc boinc 53224 Jul 12 01:10 stderr.txt
[2025-07-12 01:10:16] HITS file was successfully produced:
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 264543037 Jul 12 01:09 shared/HITS.pool.root.1
[2025-07-12 01:10:16] *** Contents of shared directory: ***
[2025-07-12 01:10:16] total 574696
[2025-07-12 01:10:16] -rw-r--r-- 3 boinc boinc 321948828 Jul 9 17:55 ATLAS.root_0
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 542901 Jul 9 17:55 input.tar.gz
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 15095 Jul 9 17:55 start_atlas.sh
[2025-07-12 01:10:16] -rw------- 1 boinc boinc 264543037 Jul 12 01:09 HITS.pool.root.1
[2025-07-12 01:10:16] -rw-r--r-- 2 boinc boinc 1423360 Jul 12 01:10 result.tar.gz
01:10:17 (464951): run_atlas exited; CPU time 43594.980285
01:10:17 (464951): called boinc_finish(0)
</stderr_txt>
]]>
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