Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:41:10 (99525): wrapper (7.7.26015): starting
04:41:10 (99525): wrapper: running run_atlas (--nthreads 12)
[2025-07-06 04:41:10] Arguments: --nthreads 12
[2025-07-06 04:41:10] Threads: 12
[2025-07-06 04:41:10] Checking for CVMFS
[2025-07-06 04:41:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-06 04:41:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-06 04:41:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-06 04:41:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-06 04:41:12] 2.11.5.0 44331 6763 230308 148003 2 555 25340042 45568001 19463 130560 0 48058493 99.794 23463224 25974 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-06 04:41:12] CVMFS is ok
[2025-07-06 04:41:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-06 04:41:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-06 04:41:12] Further information can be found at the LHC@home message board.
[2025-07-06 04:41:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-06 04:41:12] Checking for apptainer binary...
[2025-07-06 04:41:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-06 04:41:12] Running /usr/bin/apptainer --version
[2025-07-06 04:41:12] apptainer version 1.4.1-1.el9
[2025-07-06 04:41:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-06 04:41:13] wns0166.triumf.lcg
[2025-07-06 04:41:13] apptainer works
[2025-07-06 04:41:13] Set ATHENA_PROC_NUMBER=12
[2025-07-06 04:41:13] Set ATHENA_CORE_NUMBER=12
[2025-07-06 04:41:13] Starting ATLAS job with PandaID=6720733960
[2025-07-06 04:41:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-06 04:46:20]  *** The last 200 lines of the pilot log: ***
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | wrong length of table data, x=[1751802184.0], y=[1207.0] (must be same and length>=4)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | INFO     | could have reported an average CPU frequency of 2089 MHz (4 samples)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . Timing measurements:
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . get job = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . initial setup = 4 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload setup = 17 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-in = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload execution = 49 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-out = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . log creation = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 04:46:20] 2025-07-06 11:45:47,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720733960/pilotlog.txt
[2025-07-06 04:46:20] 2025-07-06 11:45:48,003 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-06 04:46:20] - Log from pilotlog.txt -
[2025-07-06 04:46:20] 2025-07-06 11:45:47,987 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720733960/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | INFO     | extracted standard info from prmon json
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | wrong length of table data, x=[1751802184.0], y=[1207.0] (must be same and length>=4)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | INFO     | could have reported an average CPU frequency of 2089 MHz (4 samples)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . Timing measurements:
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . get job = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . initial setup = 4 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload setup = 17 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-in = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload execution = 49 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-out = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . log creation = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 04:46:20] 2025-07-06 11:45:47,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720733960/pilotlog.txt
[2025-07-06 04:46:20] 2025-07-06 11:45:48,004 | WARNING  | 
[2025-07-06 04:46:20] [begin log extracts]
[2025-07-06 04:46:20] - Log from pilotlog.txt -
[2025-07-06 04:46:20] 2025-07-06 11:45:47,987 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6720733960/memory_monitor_summary.json (trf name=prmon)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | INFO     | extracted standard info from prmon json
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | INFO     | extracted standard memory fields from prmon json
[2025-07-06 04:46:20] 2025-07-06 11:45:47,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | WARNING  | wrong length of table data, x=[1751802184.0], y=[1207.0] (must be same and length>=4)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,989 | INFO     | could have reported an average CPU frequency of 2089 MHz (4 samples)
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . Timing measurements:
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . get job = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . initial setup = 4 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload setup = 17 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-in = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . payload execution = 49 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . stage-out = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | . log creation = 0 s
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | ..............................
[2025-07-06 04:46:20] 2025-07-06 11:45:47,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-06 04:46:20] 2025-07-06 11:45:47,991 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720733960/pilotlog.txt
[2025-07-06 04:46:20] [end log extracts]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,004 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-06 04:46:20] 2025-07-06 11:45:48,005 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | 
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | job summary report
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | --------------------------------------------------
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | PanDA job id: 6720733960
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | task id: 45482148
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-06 04:43:26,699 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-06 04:46:20] 2025-07-06 11:45:48,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | pilot state: failed 
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | transexitcode: 65
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | exeerrorcode: 65
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | exitcode: 65
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | cpuconsumptiontime: 19 s
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | nevents: 0
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | neventsw: 0
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | pid: 109456
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | pgrp: 109456
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | corecount: 12
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | event service: False
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | sizes: {0: 2366409, 1: 2366493, 2: 2366692, 3: 2366692, 14: 2366720, 18: 2367010, 25: 2367166, 71: 2390429, 72: 2394721, 73: 2394749, 199: 2394915}
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | --------------------------------------------------
[2025-07-06 04:46:20] 2025-07-06 11:45:48,078 | INFO     | 
[2025-07-06 04:46:20] 2025-07-06 11:45:48,079 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-06 04:46:20] 2025-07-06 11:45:48,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | job 6720733960 has completed (purged errors)
[2025-07-06 04:46:20] 2025-07-06 11:45:48,096 | INFO     | overall cleanup function is called
[2025-07-06 04:46:20] 2025-07-06 11:45:49,103 | INFO     | --- collectZombieJob: --- 10, [109456]
[2025-07-06 04:46:20] 2025-07-06 11:45:49,103 | INFO     | zombie collector waiting for pid 109456
[2025-07-06 04:46:20] 2025-07-06 11:45:49,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-06 04:46:20] 2025-07-06 11:45:49,103 | INFO     | collected zombie processes
[2025-07-06 04:46:20] 2025-07-06 11:45:49,103 | INFO     | will attempt to kill all subprocesses of pid=109456
[2025-07-06 04:46:20] 2025-07-06 11:45:49,399 | INFO     | process IDs to be killed: [109456] (in reverse order)
[2025-07-06 04:46:20] 2025-07-06 11:45:49,496 | WARNING  | found no corresponding commands to process id(s)
[2025-07-06 04:46:20] 2025-07-06 11:45:49,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-06 04:46:20] 2025-07-06 11:45:49,506 | INFO     | did not find any defunct processes belonging to 109456
[2025-07-06 04:46:20] 2025-07-06 11:45:49,514 | INFO     | did not find any defunct processes belonging to 109456
[2025-07-06 04:46:20] 2025-07-06 11:45:49,514 | INFO     | ready for new job
[2025-07-06 04:46:20] 2025-07-06 11:45:49,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-06 04:46:20] 2025-07-06 11:45:49,516 | INFO     | ***************************************
[2025-07-06 04:46:20] 2025-07-06 11:45:49,516 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-06 04:46:20] 2025-07-06 11:45:49,516 | INFO     | ***************************************
[2025-07-06 04:46:20] 2025-07-06 11:45:49,516 | INFO     | 
[2025-07-06 04:46:20] 2025-07-06 11:45:49,519 | INFO     | architecture information:
[2025-07-06 04:46:20] 2025-07-06 11:45:49,519 | INFO     | executing command: cat /etc/os-release
[2025-07-06 04:46:20] 2025-07-06 11:45:49,533 | INFO     | cat /etc/os-release:
[2025-07-06 04:46:20] NAME="CentOS Linux"
[2025-07-06 04:46:20] VERSION="7 (Core)"
[2025-07-06 04:46:20] ID="centos"
[2025-07-06 04:46:20] ID_LIKE="rhel fedora"
[2025-07-06 04:46:20] VERSION_ID="7"
[2025-07-06 04:46:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-06 04:46:20] ANSI_COLOR="0;31"
[2025-07-06 04:46:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-06 04:46:20] HOME_URL="https://www.centos.org/"
[2025-07-06 04:46:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-06 04:46:20] 
[2025-07-06 04:46:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-06 04:46:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-06 04:46:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-06 04:46:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-06 04:46:20] 
[2025-07-06 04:46:20] 2025-07-06 11:45:49,534 | INFO     | ***************************************
[2025-07-06 04:46:20] 2025-07-06 11:45:50,037 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-06 04:46:20] 2025-07-06 11:45:50,156 | INFO     | sufficient remaining disk space (2156409126912 B)
[2025-07-06 04:46:20] 2025-07-06 11:45:50,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-06 04:46:20] 2025-07-06 11:45:50,157 | INFO     | current server update state: UPDATING_FINAL
[2025-07-06 04:46:20] 2025-07-06 11:45:50,157 | INFO     | update_server=False
[2025-07-06 04:46:20] 2025-07-06 11:45:50,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-06 04:46:20] 2025-07-06 11:45:50,157 | INFO     | all data control threads have been joined
[2025-07-06 04:46:20] 2025-07-06 11:45:50,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-06 04:46:20] 2025-07-06 11:45:50,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-06 04:46:20] 2025-07-06 11:45:50,329 | INFO     | all payload control threads have been joined
[2025-07-06 04:46:20] 2025-07-06 11:45:51,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-06 04:46:20] 2025-07-06 11:45:51,051 | INFO     | aborting loop
[2025-07-06 04:46:20] 2025-07-06 11:45:51,163 | INFO     | [data] control thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,163 | INFO     | [job] retrieve thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,167 | INFO     | [payload] failed_post thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,335 | INFO     | [payload] control thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,368 | INFO     | [payload] validate_pre thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,490 | INFO     | all job control threads have been joined
[2025-07-06 04:46:20] 2025-07-06 11:45:51,491 | INFO     | [data] copytool_in thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,598 | INFO     | [payload] execute_payloads thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:51,812 | INFO     | [payload] validate_post thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,057 | INFO     | [job] job monitor thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,173 | INFO     | [data] copytool_out thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,180 | INFO     | [job] create_data_payload thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,495 | INFO     | [job] control thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:52,634 | INFO     | [job] validate thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:53,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-06 04:46:20] 2025-07-06 11:45:54,098 | INFO     | [job] queue monitor thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:54,175 | INFO     | [data] queue_monitor thread has finished
[2025-07-06 04:46:20] 2025-07-06 11:45:54,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006702151488)>', '<ExcThread(monitor, started 140006303708928)>']
[2025-07-06 04:46:20] 2025-07-06 11:45:59,581 | INFO     | all workflow threads have been joined
[2025-07-06 04:46:20] 2025-07-06 11:45:59,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-06 04:46:20] 2025-07-06 11:45:59,581 | INFO     | traces error code: 0
[2025-07-06 04:46:20] 2025-07-06 11:45:59,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-06 04:46:20] 2025-07-06 11:46:20,419 | INFO     | PID=103121 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-06 04:46:20] 2025-07-06 11:46:20,419 | INFO     | .. there are 28 such processes running
[2025-07-06 04:46:20] 2025-07-06 11:46:20,419 | INFO     | found 0 job(s) in 20 queues
[2025-07-06 04:46:20] 2025-07-06 11:46:20,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-06 04:46:20] 2025-07-06 11:46:20,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-06 04:46:20] 2025-07-06 11:46:20,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-06 04:46:20] 2025-07-06 11:46:20,420 | INFO     | [monitor] control thread has ended
[2025-07-06 04:46:20] 2025-07-06 11:46:20,628 [wrapper] ==== pilot stdout END ====
[2025-07-06 04:46:20] 2025-07-06 11:46:20,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-06 04:46:20] 2025-07-06 11:46:20,669 [wrapper] pilotpid: 103121
[2025-07-06 04:46:20] 2025-07-06 11:46:20,673 [wrapper] Pilot exit status: 0
[2025-07-06 04:46:20] 2025-07-06 11:46:20,700 [wrapper] pandaids: 6720733960
[2025-07-06 04:46:20] 2025-07-06 11:46:20,760 [wrapper] cleanup supervisor_pilot  103127 103122
[2025-07-06 04:46:20] 2025-07-06 11:46:20,765 [wrapper] Test setup, not cleaning
[2025-07-06 04:46:20] 2025-07-06 11:46:20,771 [wrapper] apfmon messages muted
[2025-07-06 04:46:20] 2025-07-06 11:46:20,786 [wrapper] ==== wrapper stdout END ====
[2025-07-06 04:46:20] 2025-07-06 11:46:20,789 [wrapper] ==== wrapper stderr END ====
[2025-07-06 04:46:20]  *** Error codes and diagnostics ***
[2025-07-06 04:46:20]     "exeErrorCode": 65,
[2025-07-06 04:46:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 04:46:20]     "pilotErrorCode": 1305,
[2025-07-06 04:46:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-06 04:46:20]  *** Listing of results directory ***
[2025-07-06 04:46:20] total 314292
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc    530466 Jul  6 00:36 pilot3.tar.gz
[2025-07-06 04:46:20] -rwx------. 1 boinc boinc     36292 Jul  6 01:04 runpilot2-wrapper.sh
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc      5112 Jul  6 01:04 queuedata.json
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc       100 Jul  6 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-06 04:46:20] -rwxr-xr-x. 1 boinc boinc      7986 Jul  6 04:41 run_atlas
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc       105 Jul  6 04:41 job.xml
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc 317780062 Jul  6 04:41 EVNT.45482146._000413.pool.root.1
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc      6594 Jul  6 04:41 init_data.xml
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc     15095 Jul  6 04:41 start_atlas.sh
[2025-07-06 04:46:20] drwxrwx--x. 2 boinc boinc      4096 Jul  6 04:41 shared
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc    542912 Jul  6 04:41 input.tar.gz
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc         0 Jul  6 04:41 boinc_lockfile
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc      2616 Jul  6 04:41 pandaJob.out
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc    970025 Jul  6 04:41 agis_schedconf.cvmfs.json
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc   1574083 Jul  6 04:41 agis_ddmendpoints.agis.ALL.json
[2025-07-06 04:46:20] drwx------. 4 boinc boinc      4096 Jul  6 04:41 pilot3
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc       524 Jul  6 04:43 boinc_task_state.xml
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc       960 Jul  6 04:43 memory_monitor_summary.json
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc     21205 Jul  6 04:43 log.45482148._010319.job.log.tgz.1
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc        95 Jul  6 04:45 pilot_heartbeat.json
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc      8408 Jul  6 04:45 heartbeat.json
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc      8192 Jul  6 04:46 boinc_mmap_file
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc        23 Jul  6 04:46 wrapper_checkpoint.txt
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc       822 Jul  6 04:46 pilotlog.txt
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc     79398 Jul  6 04:46 log.45482148._010319.job.log.1
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc       188 Jul  6 04:46 output.list
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc       620 Jul  6 04:46 runtime_log
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc    122880 Jul  6 04:46 result.tar.gz
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc       644 Jul  6 04:46 Va5NDm8WZs7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmcqKDmkMoDpn.diag
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc      8485 Jul  6 04:46 runtime_log.err
[2025-07-06 04:46:20] -rw-r--r--. 1 boinc boinc     21825 Jul  6 04:46 stderr.txt
[2025-07-06 04:46:20] No HITS result produced
[2025-07-06 04:46:20]  *** Contents of shared directory: ***
[2025-07-06 04:46:20] total 311008
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc 317780062 Jul  6 04:41 ATLAS.root_0
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc     15095 Jul  6 04:41 start_atlas.sh
[2025-07-06 04:46:20] -rw-r--r--. 2 boinc boinc    542912 Jul  6 04:41 input.tar.gz
[2025-07-06 04:46:20] -rw-------. 1 boinc boinc    122880 Jul  6 04:46 result.tar.gz
04:46:22 (99525): run_atlas exited; CPU time 28.956745
04:46:22 (99525): called boinc_finish(0)

</stderr_txt>
]]>

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