Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:05:06 (1540912): wrapper (7.7.26015): starting
07:05:06 (1540912): wrapper: running run_atlas (--nthreads 12)
[2025-07-05 07:05:06] Arguments: --nthreads 12
[2025-07-05 07:05:06] Threads: 12
[2025-07-05 07:05:06] Checking for CVMFS
[2025-07-05 07:05:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-05 07:05:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-05 07:05:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-05 07:05:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-05 07:05:07] 2.11.3.0 1134433 68412 243484 147967 3 860 37245070 45568000 10065 130560 0 1119871479 99.830 617628434 22330 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-05 07:05:07] CVMFS is ok
[2025-07-05 07:05:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-05 07:05:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-05 07:05:07] Further information can be found at the LHC@home message board.
[2025-07-05 07:05:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-05 07:05:07] Checking for apptainer binary...
[2025-07-05 07:05:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-05 07:05:07] Running /usr/bin/apptainer --version
[2025-07-05 07:05:07] apptainer version 1.3.3-1.el9
[2025-07-05 07:05:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-05 07:05:07] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0171.triumf.lcg
[2025-07-05 07:05:07] apptainer works
[2025-07-05 07:05:07] Set ATHENA_PROC_NUMBER=12
[2025-07-05 07:05:07] Set ATHENA_CORE_NUMBER=12
[2025-07-05 07:05:07] Starting ATLAS job with PandaID=6720635260
[2025-07-05 07:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-05 07:08:41]  *** The last 200 lines of the pilot log: ***
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | found no stored workdir sizes
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | wrong length of table data, x=[1751724348.0], y=[1083.0] (must be same and length>=4)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | could have reported an average CPU frequency of 2910 MHz (4 samples)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . Timing measurements:
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . get job = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . initial setup = 3 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload setup = 5 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-in = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload execution = 21 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-out = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | . log creation = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720635260/pilotlog.txt
[2025-07-05 07:08:41] 2025-07-05 14:08:09,454 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-05 07:08:41] - Log from pilotlog.txt -
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | found no stored workdir sizes
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | wrong length of table data, x=[1751724348.0], y=[1083.0] (must be same and length>=4)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | could have reported an average CPU frequency of 2910 MHz (4 samples)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . Timing measurements:
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . get job = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . initial setup = 3 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload setup = 5 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-in = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload execution = 21 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-out = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | . log creation = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720635260/pilotlog.txt
[2025-07-05 07:08:41] 2025-07-05 14:08:09,454 | WARNING  | 
[2025-07-05 07:08:41] [begin log extracts]
[2025-07-05 07:08:41] - Log from pilotlog.txt -
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | INFO     | extracted standard memory fields from prmon json
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-05 07:08:41] 2025-07-05 14:08:09,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | found no stored workdir sizes
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | will not add max space = 0 B to job metrics
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | WARNING  | wrong length of table data, x=[1751724348.0], y=[1083.0] (must be same and length>=4)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | could have reported an average CPU frequency of 2910 MHz (4 samples)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . Timing measurements:
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . get job = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . initial setup = 3 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload setup = 5 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-in = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . payload execution = 21 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,446 | INFO     | . stage-out = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | . log creation = 0 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | ..............................
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-05 07:08:41] 2025-07-05 14:08:09,447 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720635260/pilotlog.txt
[2025-07-05 07:08:41] [end log extracts]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,455 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,455 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-05 07:08:41] 2025-07-05 14:08:09,507 | INFO     | 
[2025-07-05 07:08:41] 2025-07-05 14:08:09,507 | INFO     | job summary report
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | --------------------------------------------------
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | PanDA job id: 6720635260
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | task id: 45482148
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-05 07:05:59,149 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | pilot state: failed 
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | transexitcode: 65
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | exeerrorcode: 65
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | exitcode: 65
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | cpuconsumptiontime: 12 s
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | nevents: 0
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | neventsw: 0
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | pid: 1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | pgrp: 1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | corecount: 12
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | event service: False
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | sizes: {0: 2366633, 1: 2366633, 6: 2366923, 12: 2366951, 30: 2394414, 31: 2394414, 153: 2394708}
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | --------------------------------------------------
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | 
[2025-07-05 07:08:41] 2025-07-05 14:08:09,508 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-05 07:08:41] 2025-07-05 14:08:09,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-05 07:08:41] 2025-07-05 14:08:09,524 | INFO     | job 6720635260 has completed (purged errors)
[2025-07-05 07:08:41] 2025-07-05 14:08:09,524 | INFO     | overall cleanup function is called
[2025-07-05 07:08:41] 2025-07-05 14:08:10,531 | INFO     | --- collectZombieJob: --- 10, [1550839]
[2025-07-05 07:08:41] 2025-07-05 14:08:10,531 | INFO     | zombie collector waiting for pid 1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:10,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-05 07:08:41] 2025-07-05 14:08:10,531 | INFO     | collected zombie processes
[2025-07-05 07:08:41] 2025-07-05 14:08:10,531 | INFO     | will attempt to kill all subprocesses of pid=1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:10,721 | INFO     | process IDs to be killed: [1550839] (in reverse order)
[2025-07-05 07:08:41] 2025-07-05 14:08:10,768 | WARNING  | found no corresponding commands to process id(s)
[2025-07-05 07:08:41] 2025-07-05 14:08:10,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-05 07:08:41] 2025-07-05 14:08:10,776 | INFO     | did not find any defunct processes belonging to 1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:10,793 | INFO     | did not find any defunct processes belonging to 1550839
[2025-07-05 07:08:41] 2025-07-05 14:08:10,793 | INFO     | ready for new job
[2025-07-05 07:08:41] 2025-07-05 14:08:10,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-05 07:08:41] 2025-07-05 14:08:10,795 | INFO     | ***************************************
[2025-07-05 07:08:41] 2025-07-05 14:08:10,795 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-05 07:08:41] 2025-07-05 14:08:10,795 | INFO     | ***************************************
[2025-07-05 07:08:41] 2025-07-05 14:08:10,795 | INFO     | 
[2025-07-05 07:08:41] 2025-07-05 14:08:10,815 | INFO     | architecture information:
[2025-07-05 07:08:41] 2025-07-05 14:08:10,820 | INFO     | executing command: cat /etc/os-release
[2025-07-05 07:08:41] 2025-07-05 14:08:10,852 | INFO     | cat /etc/os-release:
[2025-07-05 07:08:41] NAME="CentOS Linux"
[2025-07-05 07:08:41] VERSION="7 (Core)"
[2025-07-05 07:08:41] ID="centos"
[2025-07-05 07:08:41] ID_LIKE="rhel fedora"
[2025-07-05 07:08:41] VERSION_ID="7"
[2025-07-05 07:08:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-05 07:08:41] ANSI_COLOR="0;31"
[2025-07-05 07:08:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-05 07:08:41] HOME_URL="https://www.centos.org/"
[2025-07-05 07:08:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-05 07:08:41] 
[2025-07-05 07:08:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-05 07:08:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-05 07:08:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-05 07:08:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-05 07:08:41] 
[2025-07-05 07:08:41] 2025-07-05 14:08:10,852 | INFO     | ***************************************
[2025-07-05 07:08:41] 2025-07-05 14:08:11,355 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | INFO     | sufficient remaining disk space (2596404199424 B)
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | INFO     | current server update state: UPDATING_FINAL
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | INFO     | update_server=False
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-05 07:08:41] 2025-07-05 14:08:11,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-05 07:08:41] 2025-07-05 14:08:11,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-05 07:08:41] 2025-07-05 14:08:11,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-05 07:08:41] 2025-07-05 14:08:11,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-05 07:08:41] 2025-07-05 14:08:11,366 | INFO     | aborting loop
[2025-07-05 07:08:41] 2025-07-05 14:08:11,922 | INFO     | all payload control threads have been joined
[2025-07-05 07:08:41] 2025-07-05 14:08:12,370 | INFO     | [job] retrieve thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,371 | INFO     | [job] queue monitor thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,371 | INFO     | [job] job monitor thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,380 | INFO     | all data control threads have been joined
[2025-07-05 07:08:41] 2025-07-05 14:08:12,572 | INFO     | all job control threads have been joined
[2025-07-05 07:08:41] 2025-07-05 14:08:12,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,832 | INFO     | [payload] execute_payloads thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,928 | INFO     | [payload] control thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:12,942 | INFO     | [data] copytool_in thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,104 | INFO     | [job] validate thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,372 | INFO     | [data] copytool_out thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,394 | INFO     | [data] control thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,444 | INFO     | [payload] failed_post thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,524 | INFO     | [job] create_data_payload thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,578 | INFO     | [job] control thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,685 | INFO     | [payload] validate_pre thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:13,945 | INFO     | [payload] validate_post thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:15,380 | INFO     | [data] queue_monitor thread has finished
[2025-07-05 07:08:41] 2025-07-05 14:08:16,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457832642368)>', '<ExcThread(monitor, started 140457308845824)>']
[2025-07-05 07:08:41] 2025-07-05 14:08:21,992 | INFO     | all workflow threads have been joined
[2025-07-05 07:08:41] 2025-07-05 14:08:21,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-05 07:08:41] 2025-07-05 14:08:21,992 | INFO     | traces error code: 0
[2025-07-05 07:08:41] 2025-07-05 14:08:21,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-05 07:08:41] 2025-07-05 14:08:40,863 | INFO     | PID=1544485 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-05 07:08:41] 2025-07-05 14:08:40,863 | INFO     | .. there are 21 such processes running
[2025-07-05 07:08:41] 2025-07-05 14:08:40,864 | INFO     | found 0 job(s) in 20 queues
[2025-07-05 07:08:41] 2025-07-05 14:08:40,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-05 07:08:41] 2025-07-05 14:08:40,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-05 07:08:41] 2025-07-05 14:08:40,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-05 07:08:41] 2025-07-05 14:08:40,864 | INFO     | [monitor] control thread has ended
[2025-07-05 07:08:41] 2025-07-05 14:08:40,974 [wrapper] ==== pilot stdout END ====
[2025-07-05 07:08:41] 2025-07-05 14:08:40,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-05 07:08:41] 2025-07-05 14:08:40,978 [wrapper] pilotpid: 1544485
[2025-07-05 07:08:41] 2025-07-05 14:08:40,979 [wrapper] Pilot exit status: 0
[2025-07-05 07:08:41] 2025-07-05 14:08:41,005 [wrapper] pandaids: 6720635260
[2025-07-05 07:08:41] 2025-07-05 14:08:41,035 [wrapper] cleanup supervisor_pilot 1544491 1544486
[2025-07-05 07:08:41] 2025-07-05 14:08:41,037 [wrapper] Test setup, not cleaning
[2025-07-05 07:08:41] 2025-07-05 14:08:41,038 [wrapper] apfmon messages muted
[2025-07-05 07:08:41] 2025-07-05 14:08:41,040 [wrapper] ==== wrapper stdout END ====
[2025-07-05 07:08:41] 2025-07-05 14:08:41,083 [wrapper] ==== wrapper stderr END ====
[2025-07-05 07:08:41]  *** Error codes and diagnostics ***
[2025-07-05 07:08:41]     "exeErrorCode": 65,
[2025-07-05 07:08:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 07:08:41]     "pilotErrorCode": 1305,
[2025-07-05 07:08:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-05 07:08:41]  *** Listing of results directory ***
[2025-07-05 07:08:41] total 314728
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc    530466 Jul  5 03:05 pilot3.tar.gz
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc      5112 Jul  5 03:38 queuedata.json
[2025-07-05 07:08:41] -rwx------. 1 boinc boinc     36292 Jul  5 03:39 runpilot2-wrapper.sh
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc       100 Jul  5 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-05 07:08:41] -rwxr-xr-x. 1 boinc boinc      7986 Jul  5 07:05 run_atlas
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc       105 Jul  5 07:05 job.xml
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc      6613 Jul  5 07:05 init_data.xml
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc 318242712 Jul  5 07:05 EVNT.45482146._000255.pool.root.1
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc     15095 Jul  5 07:05 start_atlas.sh
[2025-07-05 07:08:41] drwxrwx--x. 2 boinc boinc      4096 Jul  5 07:05 shared
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc    542917 Jul  5 07:05 input.tar.gz
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc         0 Jul  5 07:05 boinc_lockfile
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc      2615 Jul  5 07:05 pandaJob.out
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc    970033 Jul  5 07:05 agis_schedconf.cvmfs.json
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc   1574083 Jul  5 07:05 agis_ddmendpoints.agis.ALL.json
[2025-07-05 07:08:41] drwx------. 4 boinc boinc      4096 Jul  5 07:05 pilot3
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc       523 Jul  5 07:06 boinc_task_state.xml
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc       969 Jul  5 07:06 memory_monitor_summary.json
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc     20831 Jul  5 07:06 log.45482148._006371.job.log.tgz.1
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc      8359 Jul  5 07:08 heartbeat.json
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc       823 Jul  5 07:08 pilotlog.txt
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc        95 Jul  5 07:08 pilot_heartbeat.json
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc        22 Jul  5 07:08 wrapper_checkpoint.txt
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc     74922 Jul  5 07:08 log.45482148._006371.job.log.1
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc      8192 Jul  5 07:08 boinc_mmap_file
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc       188 Jul  5 07:08 output.list
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc       620 Jul  5 07:08 runtime_log
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc    112640 Jul  5 07:08 result.tar.gz
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc      8650 Jul  5 07:08 runtime_log.err
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc       645 Jul  5 07:08 kCRMDm8TFs7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQVALDmdMJw3m.diag
[2025-07-05 07:08:41] -rw-r--r--. 1 boinc boinc     21809 Jul  5 07:08 stderr.txt
[2025-07-05 07:08:41] No HITS result produced
[2025-07-05 07:08:41]  *** Contents of shared directory: ***
[2025-07-05 07:08:41] total 311448
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc 318242712 Jul  5 07:05 ATLAS.root_0
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc     15095 Jul  5 07:05 start_atlas.sh
[2025-07-05 07:08:41] -rw-r--r--. 2 boinc boinc    542917 Jul  5 07:05 input.tar.gz
[2025-07-05 07:08:41] -rw-------. 1 boinc boinc    112640 Jul  5 07:08 result.tar.gz
07:08:42 (1540912): run_atlas exited; CPU time 17.679748
07:08:42 (1540912): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN