Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:02:01 (1018945): wrapper (7.7.26015): starting
17:02:01 (1018945): wrapper: running run_atlas (--nthreads 12)
[2025-07-04 17:02:01] Arguments: --nthreads 12
[2025-07-04 17:02:01] Threads: 12
[2025-07-04 17:02:01] Checking for CVMFS
[2025-07-04 17:02:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-04 17:02:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-04 17:02:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-04 17:02:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-04 17:02:02] 2.11.3.0 1134433 67569 227308 147945 1 719 24127712 45568001 19405 130560 0 1107238972 99.828 614844604 22290 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-04 17:02:02] CVMFS is ok
[2025-07-04 17:02:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-04 17:02:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-04 17:02:02] Further information can be found at the LHC@home message board.
[2025-07-04 17:02:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-04 17:02:02] Checking for apptainer binary...
[2025-07-04 17:02:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-04 17:02:02] Running /usr/bin/apptainer --version
[2025-07-04 17:02:02] apptainer version 1.3.3-1.el9
[2025-07-04 17:02:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-04 17:02:02] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0171.triumf.lcg
[2025-07-04 17:02:02] apptainer works
[2025-07-04 17:02:02] Set ATHENA_PROC_NUMBER=12
[2025-07-04 17:02:02] Set ATHENA_CORE_NUMBER=12
[2025-07-04 17:02:02] Starting ATLAS job with PandaID=6720588798
[2025-07-04 17:02:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-04 17:05:15]  *** The last 200 lines of the pilot log: ***
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | found no stored workdir sizes
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | wrong length of table data, x=[1751673748.0], y=[841.0] (must be same and length>=4)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | could have reported an average CPU frequency of 3110 MHz (4 samples)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . Timing measurements:
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . get job = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . initial setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-in = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload execution = 12 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-out = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . log creation = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720588798/pilotlog.txt
[2025-07-04 17:05:15] 2025-07-05 00:04:41,981 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-04 17:05:15] - Log from pilotlog.txt -
[2025-07-04 17:05:15] 2025-07-05 00:04:41,969 | INFO     | extracted standard memory fields from prmon json
[2025-07-04 17:05:15] 2025-07-05 00:04:41,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | found no stored workdir sizes
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | wrong length of table data, x=[1751673748.0], y=[841.0] (must be same and length>=4)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | could have reported an average CPU frequency of 3110 MHz (4 samples)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . Timing measurements:
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . get job = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . initial setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-in = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload execution = 12 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-out = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . log creation = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720588798/pilotlog.txt
[2025-07-04 17:05:15] 2025-07-05 00:04:41,981 | WARNING  | 
[2025-07-04 17:05:15] [begin log extracts]
[2025-07-04 17:05:15] - Log from pilotlog.txt -
[2025-07-04 17:05:15] 2025-07-05 00:04:41,969 | INFO     | extracted standard memory fields from prmon json
[2025-07-04 17:05:15] 2025-07-05 00:04:41,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | found no stored workdir sizes
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | WARNING  | wrong length of table data, x=[1751673748.0], y=[841.0] (must be same and length>=4)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,970 | INFO     | could have reported an average CPU frequency of 3110 MHz (4 samples)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . Timing measurements:
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . get job = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . initial setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload setup = 2 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-in = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . payload execution = 12 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . stage-out = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | . log creation = 0 s
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | ..............................
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 17:05:15] 2025-07-05 00:04:41,971 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720588798/pilotlog.txt
[2025-07-04 17:05:15] [end log extracts]
[2025-07-04 17:05:15] 2025-07-05 00:04:41,982 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-04 17:05:15] 2025-07-05 00:04:41,982 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | 
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | job summary report
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | --------------------------------------------------
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | PanDA job id: 6720588798
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | task id: 45482062
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-04 17:02:33,620 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | pilot state: failed 
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | transexitcode: 65
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | exeerrorcode: 65
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | exitcode: 65
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | cpuconsumptiontime: 11 s
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | nevents: 0
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | neventsw: 0
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | pid: 1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | pgrp: 1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:42,329 | INFO     | corecount: 12
[2025-07-04 17:05:15] 2025-07-05 00:04:42,330 | INFO     | event service: False
[2025-07-04 17:05:15] 2025-07-05 00:04:42,330 | INFO     | sizes: {0: 2366550, 3: 2366812, 11: 2366840, 18: 2390024, 19: 2394316, 21: 2394344, 140: 2394638}
[2025-07-04 17:05:15] 2025-07-05 00:04:42,330 | INFO     | --------------------------------------------------
[2025-07-04 17:05:15] 2025-07-05 00:04:42,330 | INFO     | 
[2025-07-04 17:05:15] 2025-07-05 00:04:42,330 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-04 17:05:15] 2025-07-05 00:04:42,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | job 6720588798 has completed (purged errors)
[2025-07-04 17:05:15] 2025-07-05 00:04:42,341 | INFO     | overall cleanup function is called
[2025-07-04 17:05:15] 2025-07-05 00:04:43,347 | INFO     | --- collectZombieJob: --- 10, [1028821]
[2025-07-04 17:05:15] 2025-07-05 00:04:43,347 | INFO     | zombie collector waiting for pid 1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:43,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-04 17:05:15] 2025-07-05 00:04:43,347 | INFO     | collected zombie processes
[2025-07-04 17:05:15] 2025-07-05 00:04:43,347 | INFO     | will attempt to kill all subprocesses of pid=1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:43,504 | INFO     | process IDs to be killed: [1028821] (in reverse order)
[2025-07-04 17:05:15] 2025-07-05 00:04:43,560 | WARNING  | found no corresponding commands to process id(s)
[2025-07-04 17:05:15] 2025-07-05 00:04:43,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-04 17:05:15] 2025-07-05 00:04:43,571 | INFO     | did not find any defunct processes belonging to 1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:43,578 | INFO     | did not find any defunct processes belonging to 1028821
[2025-07-04 17:05:15] 2025-07-05 00:04:43,578 | INFO     | ready for new job
[2025-07-04 17:05:15] 2025-07-05 00:04:43,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-04 17:05:15] 2025-07-05 00:04:43,579 | INFO     | ***************************************
[2025-07-04 17:05:15] 2025-07-05 00:04:43,580 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-04 17:05:15] 2025-07-05 00:04:43,580 | INFO     | ***************************************
[2025-07-04 17:05:15] 2025-07-05 00:04:43,580 | INFO     | 
[2025-07-04 17:05:15] 2025-07-05 00:04:43,593 | INFO     | architecture information:
[2025-07-04 17:05:15] 2025-07-05 00:04:43,593 | INFO     | executing command: cat /etc/os-release
[2025-07-04 17:05:15] 2025-07-05 00:04:43,602 | INFO     | cat /etc/os-release:
[2025-07-04 17:05:15] NAME="CentOS Linux"
[2025-07-04 17:05:15] VERSION="7 (Core)"
[2025-07-04 17:05:15] ID="centos"
[2025-07-04 17:05:15] ID_LIKE="rhel fedora"
[2025-07-04 17:05:15] VERSION_ID="7"
[2025-07-04 17:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-04 17:05:15] ANSI_COLOR="0;31"
[2025-07-04 17:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-04 17:05:15] HOME_URL="https://www.centos.org/"
[2025-07-04 17:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-04 17:05:15] 
[2025-07-04 17:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-04 17:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-04 17:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-04 17:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-04 17:05:15] 
[2025-07-04 17:05:15] 2025-07-05 00:04:43,602 | INFO     | ***************************************
[2025-07-04 17:05:15] 2025-07-05 00:04:44,105 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-04 17:05:15] 2025-07-05 00:04:44,115 | INFO     | sufficient remaining disk space (2138802487296 B)
[2025-07-04 17:05:15] 2025-07-05 00:04:44,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-04 17:05:15] 2025-07-05 00:04:44,116 | INFO     | current server update state: UPDATING_FINAL
[2025-07-04 17:05:15] 2025-07-05 00:04:44,116 | INFO     | update_server=False
[2025-07-04 17:05:15] 2025-07-05 00:04:44,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-04 17:05:15] 2025-07-05 00:04:44,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-04 17:05:15] 2025-07-05 00:04:44,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-04 17:05:15] 2025-07-05 00:04:44,141 | INFO     | aborting loop
[2025-07-04 17:05:15] 2025-07-05 00:04:44,488 | INFO     | all job control threads have been joined
[2025-07-04 17:05:15] 2025-07-05 00:04:44,576 | INFO     | all data control threads have been joined
[2025-07-04 17:05:15] 2025-07-05 00:04:45,121 | INFO     | [job] retrieve thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,144 | INFO     | [job] job monitor thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,479 | INFO     | all payload control threads have been joined
[2025-07-04 17:05:15] 2025-07-05 00:04:45,493 | INFO     | [job] control thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,584 | INFO     | [data] control thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-04 17:05:15] 2025-07-05 00:04:45,820 | INFO     | [data] copytool_in thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:45,988 | INFO     | [payload] execute_payloads thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,122 | INFO     | [data] copytool_out thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,363 | INFO     | [job] validate thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,406 | INFO     | [payload] failed_post thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,482 | INFO     | [payload] control thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,490 | INFO     | [job] create_data_payload thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,533 | INFO     | [payload] validate_post thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:46,572 | INFO     | [payload] validate_pre thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:47,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-04 17:05:15] 2025-07-05 00:04:48,045 | INFO     | [job] queue monitor thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:49,618 | INFO     | [data] queue_monitor thread has finished
[2025-07-04 17:05:15] 2025-07-05 00:04:50,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288477357888)>', '<ExcThread(monitor, started 140288077043456)>']
[2025-07-04 17:05:15] 2025-07-05 00:04:55,809 | INFO     | all workflow threads have been joined
[2025-07-04 17:05:15] 2025-07-05 00:04:55,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-04 17:05:15] 2025-07-05 00:04:55,810 | INFO     | traces error code: 0
[2025-07-04 17:05:15] 2025-07-05 00:04:55,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-04 17:05:15] 2025-07-05 00:05:15,282 | INFO     | PID=1022512 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-04 17:05:15] 2025-07-05 00:05:15,282 | INFO     | .. there are 41 such processes running
[2025-07-04 17:05:15] 2025-07-05 00:05:15,283 | INFO     | found 0 job(s) in 20 queues
[2025-07-04 17:05:15] 2025-07-05 00:05:15,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-04 17:05:15] 2025-07-05 00:05:15,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-04 17:05:15] 2025-07-05 00:05:15,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-04 17:05:15] 2025-07-05 00:05:15,283 | INFO     | [monitor] control thread has ended
[2025-07-04 17:05:15] 2025-07-05 00:05:15,392 [wrapper] ==== pilot stdout END ====
[2025-07-04 17:05:15] 2025-07-05 00:05:15,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-04 17:05:15] 2025-07-05 00:05:15,395 [wrapper] pilotpid: 1022512
[2025-07-04 17:05:15] 2025-07-05 00:05:15,396 [wrapper] Pilot exit status: 0
[2025-07-04 17:05:15] 2025-07-05 00:05:15,402 [wrapper] pandaids: 6720588798
[2025-07-04 17:05:15] 2025-07-05 00:05:15,441 [wrapper] cleanup supervisor_pilot 1022518 1022513
[2025-07-04 17:05:15] 2025-07-05 00:05:15,443 [wrapper] Test setup, not cleaning
[2025-07-04 17:05:15] 2025-07-05 00:05:15,445 [wrapper] apfmon messages muted
[2025-07-04 17:05:15] 2025-07-05 00:05:15,446 [wrapper] ==== wrapper stdout END ====
[2025-07-04 17:05:15] 2025-07-05 00:05:15,447 [wrapper] ==== wrapper stderr END ====
[2025-07-04 17:05:15]  *** Error codes and diagnostics ***
[2025-07-04 17:05:15]     "exeErrorCode": 65,
[2025-07-04 17:05:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-04 17:05:15]     "pilotErrorCode": 1305,
[2025-07-04 17:05:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-04 17:05:15]  *** Listing of results directory ***
[2025-07-04 17:05:15] total 314952
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc    530466 Jul  4 15:13 pilot3.tar.gz
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc      5112 Jul  4 15:51 queuedata.json
[2025-07-04 17:05:15] -rwx------. 1 boinc boinc     36292 Jul  4 15:52 runpilot2-wrapper.sh
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc       100 Jul  4 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-04 17:05:15] -rwxr-xr-x. 1 boinc boinc      7986 Jul  4 17:02 run_atlas
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc       105 Jul  4 17:02 job.xml
[2025-07-04 17:05:15] drwxrwx--x. 2 boinc boinc      4096 Jul  4 17:02 shared
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc    542882 Jul  4 17:02 input.tar.gz
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc      6613 Jul  4 17:02 init_data.xml
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc 318480001 Jul  4 17:02 EVNT.45482060._000138.pool.root.1
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc     15095 Jul  4 17:02 start_atlas.sh
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc         0 Jul  4 17:02 boinc_lockfile
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc      2532 Jul  4 17:02 pandaJob.out
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc    966317 Jul  4 17:02 agis_schedconf.cvmfs.json
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc   1574083 Jul  4 17:02 agis_ddmendpoints.agis.ALL.json
[2025-07-04 17:05:15] drwx------. 4 boinc boinc      4096 Jul  4 17:02 pilot3
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc       522 Jul  4 17:02 boinc_task_state.xml
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc       965 Jul  4 17:02 memory_monitor_summary.json
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc     20469 Jul  4 17:02 log.45482062._003431.job.log.tgz.1
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc      8387 Jul  4 17:04 heartbeat.json
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc        22 Jul  4 17:05 wrapper_checkpoint.txt
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc      8192 Jul  4 17:05 boinc_mmap_file
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc       823 Jul  4 17:05 pilotlog.txt
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc        95 Jul  4 17:05 pilot_heartbeat.json
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc     74100 Jul  4 17:05 log.45482062._003431.job.log.1
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc       188 Jul  4 17:05 output.list
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc       620 Jul  4 17:05 runtime_log
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc    112640 Jul  4 17:05 result.tar.gz
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc       644 Jul  4 17:05 YknKDm2R4r7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8y8KDmXAR9Co.diag
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc      8650 Jul  4 17:05 runtime_log.err
[2025-07-04 17:05:15] -rw-r--r--. 1 boinc boinc     21807 Jul  4 17:05 stderr.txt
[2025-07-04 17:05:15] No HITS result produced
[2025-07-04 17:05:15]  *** Contents of shared directory: ***
[2025-07-04 17:05:15] total 311680
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc    542882 Jul  4 17:02 input.tar.gz
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc 318480001 Jul  4 17:02 ATLAS.root_0
[2025-07-04 17:05:15] -rw-r--r--. 2 boinc boinc     15095 Jul  4 17:02 start_atlas.sh
[2025-07-04 17:05:15] -rw-------. 1 boinc boinc    112640 Jul  4 17:05 result.tar.gz
17:05:17 (1018945): run_atlas exited; CPU time 15.922744
17:05:17 (1018945): called boinc_finish(0)

</stderr_txt>
]]>

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