Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:13:25 (715794): wrapper (7.7.26015): starting
13:13:25 (715794): wrapper: running run_atlas (--nthreads 12)
[2025-07-04 13:13:25] Arguments: --nthreads 12
[2025-07-04 13:13:25] Threads: 12
[2025-07-04 13:13:25] Checking for CVMFS
[2025-07-04 13:13:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-04 13:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-04 13:13:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-04 13:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-04 13:13:26] 2.11.5.0 326830 70 60456 147938 2 185 36863914 45568001 0 130560 0 1015739 99.998 2950 6158 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-04 13:13:26] CVMFS is ok
[2025-07-04 13:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-04 13:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-04 13:13:26] Further information can be found at the LHC@home message board.
[2025-07-04 13:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-04 13:13:26] Checking for apptainer binary...
[2025-07-04 13:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-04 13:13:26] Running /usr/bin/apptainer --version
[2025-07-04 13:13:26] apptainer version 1.4.1-1.el9
[2025-07-04 13:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-04 13:13:26] wns0060.triumf.lcg
[2025-07-04 13:13:26] apptainer works
[2025-07-04 13:13:26] Set ATHENA_PROC_NUMBER=12
[2025-07-04 13:13:26] Set ATHENA_CORE_NUMBER=12
[2025-07-04 13:13:26] Starting ATLAS job with PandaID=6720453085
[2025-07-04 13:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-04 13:16:38]  *** The last 200 lines of the pilot log: ***
[2025-07-04 13:16:38] 2025-07-04 20:16:05,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | found no stored workdir sizes
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | WARNING  | wrong length of table data, x=[1751660032.0], y=[998.0] (must be same and length>=4)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | could have reported an average CPU frequency of 3118 MHz (4 samples)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . Timing measurements:
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . get job = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . initial setup = 2 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload setup = 3 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-in = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload execution = 11 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-out = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . log creation = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720453085/pilotlog.txt
[2025-07-04 13:16:38] 2025-07-04 20:16:05,875 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-04 13:16:38] - Log from pilotlog.txt -
[2025-07-04 13:16:38] 2025-07-04 20:16:05,865 | INFO     | extracted standard memory fields from prmon json
[2025-07-04 13:16:38] 2025-07-04 20:16:05,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | found no stored workdir sizes
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | WARNING  | wrong length of table data, x=[1751660032.0], y=[998.0] (must be same and length>=4)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | could have reported an average CPU frequency of 3118 MHz (4 samples)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . Timing measurements:
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . get job = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . initial setup = 2 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload setup = 3 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-in = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload execution = 11 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-out = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . log creation = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720453085/pilotlog.txt
[2025-07-04 13:16:38] 2025-07-04 20:16:05,876 | WARNING  | 
[2025-07-04 13:16:38] [begin log extracts]
[2025-07-04 13:16:38] - Log from pilotlog.txt -
[2025-07-04 13:16:38] 2025-07-04 20:16:05,865 | INFO     | extracted standard memory fields from prmon json
[2025-07-04 13:16:38] 2025-07-04 20:16:05,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | WARNING  | found no stored workdir sizes
[2025-07-04 13:16:38] 2025-07-04 20:16:05,866 | INFO     | will not add max space = 0 B to job metrics
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | WARNING  | wrong length of table data, x=[1751660032.0], y=[998.0] (must be same and length>=4)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | could have reported an average CPU frequency of 3118 MHz (4 samples)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . Timing measurements:
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . get job = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . initial setup = 2 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload setup = 3 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-in = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . payload execution = 11 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . stage-out = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | . log creation = 0 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,867 | INFO     | ..............................
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-04 13:16:38] 2025-07-04 20:16:05,868 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6720453085/pilotlog.txt
[2025-07-04 13:16:38] [end log extracts]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,876 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,876 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-04 13:16:38] 2025-07-04 20:16:05,928 | INFO     | 
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | job summary report
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | --------------------------------------------------
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | PanDA job id: 6720453085
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | task id: 45482137
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-04 13:13:57,733 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | pilot state: failed 
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | transexitcode: 65
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | exeerrorcode: 65
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | exitcode: 65
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | cpuconsumptiontime: 13 s
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | nevents: 0
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | neventsw: 0
[2025-07-04 13:16:38] 2025-07-04 20:16:05,929 | INFO     | pid: 725759
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | pgrp: 725759
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | corecount: 12
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | event service: False
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | sizes: {0: 2366555, 3: 2366817, 11: 2366845, 18: 2394172, 21: 2394172, 140: 2394338}
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | --------------------------------------------------
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | 
[2025-07-04 13:16:38] 2025-07-04 20:16:05,930 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | job 6720453085 has completed (purged errors)
[2025-07-04 13:16:38] 2025-07-04 20:16:05,943 | INFO     | overall cleanup function is called
[2025-07-04 13:16:38] 2025-07-04 20:16:06,949 | INFO     | --- collectZombieJob: --- 10, [725759]
[2025-07-04 13:16:38] 2025-07-04 20:16:06,949 | INFO     | zombie collector waiting for pid 725759
[2025-07-04 13:16:38] 2025-07-04 20:16:06,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-04 13:16:38] 2025-07-04 20:16:06,950 | INFO     | collected zombie processes
[2025-07-04 13:16:38] 2025-07-04 20:16:06,950 | INFO     | will attempt to kill all subprocesses of pid=725759
[2025-07-04 13:16:38] 2025-07-04 20:16:07,035 | INFO     | process IDs to be killed: [725759] (in reverse order)
[2025-07-04 13:16:38] 2025-07-04 20:16:07,065 | WARNING  | found no corresponding commands to process id(s)
[2025-07-04 13:16:38] 2025-07-04 20:16:07,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-04 13:16:38] 2025-07-04 20:16:07,068 | INFO     | did not find any defunct processes belonging to 725759
[2025-07-04 13:16:38] 2025-07-04 20:16:07,071 | INFO     | did not find any defunct processes belonging to 725759
[2025-07-04 13:16:38] 2025-07-04 20:16:07,071 | INFO     | ready for new job
[2025-07-04 13:16:38] 2025-07-04 20:16:07,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-04 13:16:38] 2025-07-04 20:16:07,072 | INFO     | ***************************************
[2025-07-04 13:16:38] 2025-07-04 20:16:07,072 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-04 13:16:38] 2025-07-04 20:16:07,072 | INFO     | ***************************************
[2025-07-04 13:16:38] 2025-07-04 20:16:07,072 | INFO     | 
[2025-07-04 13:16:38] 2025-07-04 20:16:07,074 | INFO     | architecture information:
[2025-07-04 13:16:38] 2025-07-04 20:16:07,074 | INFO     | executing command: cat /etc/os-release
[2025-07-04 13:16:38] 2025-07-04 20:16:07,080 | INFO     | cat /etc/os-release:
[2025-07-04 13:16:38] NAME="CentOS Linux"
[2025-07-04 13:16:38] VERSION="7 (Core)"
[2025-07-04 13:16:38] ID="centos"
[2025-07-04 13:16:38] ID_LIKE="rhel fedora"
[2025-07-04 13:16:38] VERSION_ID="7"
[2025-07-04 13:16:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-04 13:16:38] ANSI_COLOR="0;31"
[2025-07-04 13:16:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-04 13:16:38] HOME_URL="https://www.centos.org/"
[2025-07-04 13:16:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-04 13:16:38] 
[2025-07-04 13:16:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-04 13:16:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-04 13:16:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-04 13:16:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-04 13:16:38] 
[2025-07-04 13:16:38] 2025-07-04 20:16:07,081 | INFO     | ***************************************
[2025-07-04 13:16:38] 2025-07-04 20:16:07,584 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | INFO     | sufficient remaining disk space (2243017310208 B)
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | INFO     | current server update state: UPDATING_FINAL
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | INFO     | update_server=False
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-04 13:16:38] 2025-07-04 20:16:07,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-04 13:16:38] 2025-07-04 20:16:07,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-04 13:16:38] 2025-07-04 20:16:07,726 | INFO     | all payload control threads have been joined
[2025-07-04 13:16:38] 2025-07-04 20:16:07,938 | INFO     | all job control threads have been joined
[2025-07-04 13:16:38] 2025-07-04 20:16:08,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-04 13:16:38] 2025-07-04 20:16:08,069 | INFO     | aborting loop
[2025-07-04 13:16:38] 2025-07-04 20:16:08,339 | INFO     | all data control threads have been joined
[2025-07-04 13:16:38] 2025-07-04 20:16:08,597 | INFO     | [job] retrieve thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:08,597 | INFO     | [job] queue monitor thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:08,601 | INFO     | [data] copytool_in thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:08,678 | INFO     | [payload] failed_post thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:08,731 | INFO     | [payload] control thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:08,943 | INFO     | [job] control thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,063 | INFO     | [job] validate thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,074 | INFO     | [job] job monitor thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,135 | INFO     | [payload] validate_post thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,195 | INFO     | [job] create_data_payload thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,281 | INFO     | [payload] validate_pre thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,345 | INFO     | [data] control thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,597 | INFO     | [data] copytool_out thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:09,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-04 13:16:38] 2025-07-04 20:16:09,914 | INFO     | [payload] execute_payloads thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:13,789 | INFO     | [data] queue_monitor thread has finished
[2025-07-04 13:16:38] 2025-07-04 20:16:14,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104341145408)>', '<ExcThread(monitor, started 140103938713344)>']
[2025-07-04 13:16:38] 2025-07-04 20:16:19,694 | INFO     | all workflow threads have been joined
[2025-07-04 13:16:38] 2025-07-04 20:16:19,694 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-04 13:16:38] 2025-07-04 20:16:19,694 | INFO     | traces error code: 0
[2025-07-04 13:16:38] 2025-07-04 20:16:19,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-04 13:16:38] 2025-07-04 20:16:38,607 | INFO     | PID=719407 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-04 13:16:38] 2025-07-04 20:16:38,608 | INFO     | found 0 job(s) in 20 queues
[2025-07-04 13:16:38] 2025-07-04 20:16:38,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-04 13:16:38] 2025-07-04 20:16:38,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-04 13:16:38] 2025-07-04 20:16:38,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-04 13:16:38] 2025-07-04 20:16:38,608 | INFO     | [monitor] control thread has ended
[2025-07-04 13:16:38] 2025-07-04 20:16:38,675 [wrapper] ==== pilot stdout END ====
[2025-07-04 13:16:38] 2025-07-04 20:16:38,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-04 13:16:38] 2025-07-04 20:16:38,678 [wrapper] pilotpid: 719407
[2025-07-04 13:16:38] 2025-07-04 20:16:38,680 [wrapper] Pilot exit status: 0
[2025-07-04 13:16:38] 2025-07-04 20:16:38,686 [wrapper] pandaids: 6720453085
[2025-07-04 13:16:38] 2025-07-04 20:16:38,708 [wrapper] cleanup supervisor_pilot  719413 719408
[2025-07-04 13:16:38] 2025-07-04 20:16:38,710 [wrapper] Test setup, not cleaning
[2025-07-04 13:16:38] 2025-07-04 20:16:38,711 [wrapper] apfmon messages muted
[2025-07-04 13:16:38] 2025-07-04 20:16:38,713 [wrapper] ==== wrapper stdout END ====
[2025-07-04 13:16:38] 2025-07-04 20:16:38,714 [wrapper] ==== wrapper stderr END ====
[2025-07-04 13:16:38]  *** Error codes and diagnostics ***
[2025-07-04 13:16:38]     "exeErrorCode": 65,
[2025-07-04 13:16:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-04 13:16:38]     "pilotErrorCode": 1305,
[2025-07-04 13:16:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-04 13:16:38]  *** Listing of results directory ***
[2025-07-04 13:16:38] total 308684
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc    530466 Jul  4 11:31 pilot3.tar.gz
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc      5112 Jul  4 12:16 queuedata.json
[2025-07-04 13:16:38] -rwx------. 1 boinc boinc     36292 Jul  4 12:19 runpilot2-wrapper.sh
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc       100 Jul  4 13:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-04 13:16:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul  4 13:13 run_atlas
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc       105 Jul  4 13:13 job.xml
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc      6597 Jul  4 13:13 init_data.xml
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc 312064858 Jul  4 13:13 EVNT.45482135._000021.pool.root.1
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc     15095 Jul  4 13:13 start_atlas.sh
[2025-07-04 13:16:38] drwxrwx--x. 2 boinc boinc      4096 Jul  4 13:13 shared
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc    542885 Jul  4 13:13 input.tar.gz
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc         0 Jul  4 13:13 boinc_lockfile
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc      2540 Jul  4 13:13 pandaJob.out
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc    965500 Jul  4 13:13 agis_schedconf.cvmfs.json
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc   1574083 Jul  4 13:13 agis_ddmendpoints.agis.ALL.json
[2025-07-04 13:16:38] drwx------. 4 boinc boinc      4096 Jul  4 13:13 pilot3
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc       944 Jul  4 13:14 memory_monitor_summary.json
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc       521 Jul  4 13:14 boinc_task_state.xml
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc     20640 Jul  4 13:14 log.45482137._000515.job.log.tgz.1
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc      8340 Jul  4 13:16 heartbeat.json
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc        22 Jul  4 13:16 wrapper_checkpoint.txt
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc      8192 Jul  4 13:16 boinc_mmap_file
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc        95 Jul  4 13:16 pilot_heartbeat.json
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc       746 Jul  4 13:16 pilotlog.txt
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc     73227 Jul  4 13:16 log.45482137._000515.job.log.1
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc       188 Jul  4 13:16 output.list
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc       620 Jul  4 13:16 runtime_log
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc    112640 Jul  4 13:16 result.tar.gz
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc       644 Jul  4 13:16 ZSOODmT70r7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgcnKDmycKImn.diag
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc      8485 Jul  4 13:16 runtime_log.err
[2025-07-04 13:16:38] -rw-r--r--. 1 boinc boinc     21600 Jul  4 13:16 stderr.txt
[2025-07-04 13:16:38] No HITS result produced
[2025-07-04 13:16:38]  *** Contents of shared directory: ***
[2025-07-04 13:16:38] total 305412
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc 312064858 Jul  4 13:13 ATLAS.root_0
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc     15095 Jul  4 13:13 start_atlas.sh
[2025-07-04 13:16:38] -rw-r--r--. 2 boinc boinc    542885 Jul  4 13:13 input.tar.gz
[2025-07-04 13:16:38] -rw-------. 1 boinc boinc    112640 Jul  4 13:16 result.tar.gz
13:16:40 (715794): run_atlas exited; CPU time 15.675241
13:16:40 (715794): called boinc_finish(0)

</stderr_txt>
]]>

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