Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:47 (3459232): wrapper (7.7.26015): starting
22:18:47 (3459232): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:18:47] Arguments: --nthreads 8
[2025-06-04 22:18:47] Threads: 8
[2025-06-04 22:18:47] Checking for CVMFS
[2025-06-04 22:18:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:18:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:18:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:18:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:18:48] 2.12.6.0 61263 32162 201868 146802 0 262 31304201 40960000 44518 16776704 1 503827053 99.787 284677331 31892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:18:48] CVMFS is ok
[2025-06-04 22:18:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:18:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:18:48] Further information can be found at the LHC@home message board.
[2025-06-04 22:18:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:18:48] Checking for apptainer binary...
[2025-06-04 22:18:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:18:48] Running /usr/bin/apptainer --version
[2025-06-04 22:18:48] apptainer version 1.4.1-1.el9
[2025-06-04 22:18:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:18:48] c8-7-5.aglt2.org
[2025-06-04 22:18:48] apptainer works
[2025-06-04 22:18:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:18:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:18:48] Starting ATLAS job with PandaID=6668686962
[2025-06-04 22:18:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:28:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:28:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 23:28:16]  is_altstaged=None
[2025-06-04 23:28:16]  is_tar=False
[2025-06-04 23:28:16]  lfn=log.44871837._086355.job.log.tgz.1
[2025-06-04 23:28:16]  mtime=0
[2025-06-04 23:28:16]  protocol_id=None
[2025-06-04 23:28:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 23:28:16]  replicas=None
[2025-06-04 23:28:16]  scope=mc23_13p6TeV
[2025-06-04 23:28:16]  status=None
[2025-06-04 23:28:16]  status_code=0
[2025-06-04 23:28:16]  storage_token=
[2025-06-04 23:28:16]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668686962/log.44871837._086355.job.log.tgz.1
[2025-06-04 23:28:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/4f/log.44871837._086355.job.log.tgz.1
[2025-06-04 23:28:16]  workdir=None
[2025-06-04 23:28:16] ]
[2025-06-04 23:28:16] 2025-06-05 03:27:50,546 | INFO     | transferring file log.44871837._086355.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668686962/log.44871837._086355.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 23:28:16] 2025-06-05 03:27:50,546 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668686962/log.44871837._086355.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._086355.job
[2025-06-04 23:28:16] 2025-06-05 03:27:50,568 | INFO     | adding to output.list: log.44871837._086355.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/4f/log.44871837._086355.job.log.tg
[2025-06-04 23:28:16] 2025-06-05 03:27:50,569 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 23:28:16] 2025-06-05 03:27:50,570 | INFO     | summary of transferred files:
[2025-06-04 23:28:16] 2025-06-05 03:27:50,570 | INFO     |  -- lfn=log.44871837._086355.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 23:28:16] 2025-06-05 03:27:50,570 | INFO     | stage-out finished correctly
[2025-06-04 23:28:16] 2025-06-05 03:27:50,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 23:28:16] 2025-06-05 03:27:51,056 | INFO     | job 6668686962 has state=finished
[2025-06-04 23:28:16] 2025-06-05 03:27:51,056 | INFO     | preparing for final server update for job 6668686962 in state='finished'
[2025-06-04 23:28:16] 2025-06-05 03:27:51,056 | INFO     | this job has now completed (state=finished)
[2025-06-04 23:28:16] 2025-06-05 03:27:51,057 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 23:28:16] 2025-06-05 03:27:51,057 | INFO     | log transfer has been attempted: DONE
[2025-06-04 23:28:16] 2025-06-05 03:27:51,057 | INFO     | job 6668686962 has finished - writing final server update
[2025-06-04 23:28:16] 2025-06-05 03:27:51,057 | INFO     | total number of processed events: 400 (read)
[2025-06-04 23:28:16] 2025-06-05 03:27:51,064 | INFO     | executing command: lscpu
[2025-06-04 23:28:16] 2025-06-05 03:27:51,145 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:28:16] 2025-06-05 03:27:51,186 | WARNING  | process 3498552 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 23:28:16] 2025-06-05 03:27:51,187 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668686962/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:28:16] 2025-06-05 03:27:51,668 | INFO     | number of running child processes to parent process 3498552: 1
[2025-06-04 23:28:16] 2025-06-05 03:27:51,668 | INFO     | maximum number of monitored processes: 6
[2025-06-04 23:28:16] 2025-06-05 03:27:54,172 | INFO     | monitor loop #294: job 0:6668686962 is in state 'finished'
[2025-06-04 23:28:16] 2025-06-05 03:27:54,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,554 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 23:28:16] 2025-06-05 03:27:55,554 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668686962/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,554 | INFO     | extracted standard info from prmon json
[2025-06-04 23:28:16] 2025-06-05 03:27:55,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:28:16] 2025-06-05 03:27:55,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:28:16] 2025-06-05 03:27:55,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:28:16] 2025-06-05 03:27:55,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:28:16] 2025-06-05 03:27:55,555 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:28:16] 2025-06-05 03:27:55,555 | INFO     | sum of square deviations: 70364110.0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | sum of deviations: -2752360321.0000005
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | mean x: 1749092100.0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | mean y: 2672757.918032787
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | -- intersect: 68420104511.32988
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | intersect: 68420104511.32988
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | chi2: 0.037907616503010666
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | -- intersect: 68420104511.32988
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | current memory leak: -39.12 B/s (using 61 data points, chi2=0.04)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | ..............................
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . Timing measurements:
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . get job = 0 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . initial setup = 2 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . payload setup = 6 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . stage-in = 0 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . payload execution = 4106 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . stage-out = 0 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | . log creation = 0 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,556 | INFO     | ..............................
[2025-06-04 23:28:16] 2025-06-05 03:27:55,589 | INFO     | 
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | job summary report
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | --------------------------------------------------
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | PanDA job id: 6668686962
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | task id: 44871837
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | errors: (none)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | pilot state: finished 
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | transexitcode: 0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | exeerrorcode: 0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | exeerrordiag: 
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | exitcode: 0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | exitmsg: OK
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | cpuconsumptiontime: 29400 s
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | nevents: 400
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | neventsw: 0
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | pid: 3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | pgrp: 3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | corecount: 8
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | event service: False
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 4116: 2423548, 4117: 2432673, 4122: 2432787}
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | --------------------------------------------------
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | 
[2025-06-04 23:28:16] 2025-06-05 03:27:55,590 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | job 6668686962 has completed (purged errors)
[2025-06-04 23:28:16] 2025-06-05 03:27:55,606 | INFO     | overall cleanup function is called
[2025-06-04 23:28:16] 2025-06-05 03:27:56,613 | INFO     | --- collectZombieJob: --- 10, [3498552]
[2025-06-04 23:28:16] 2025-06-05 03:27:56,613 | INFO     | zombie collector waiting for pid 3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:56,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:28:16] 2025-06-05 03:27:56,613 | INFO     | collected zombie processes
[2025-06-04 23:28:16] 2025-06-05 03:27:56,613 | INFO     | will attempt to kill all subprocesses of pid=3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:57,007 | INFO     | process IDs to be killed: [3498552] (in reverse order)
[2025-06-04 23:28:16] 2025-06-05 03:27:57,186 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:28:16] 2025-06-05 03:27:57,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:28:16] 2025-06-05 03:27:57,214 | INFO     | did not find any defunct processes belonging to 3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:57,242 | INFO     | did not find any defunct processes belonging to 3498552
[2025-06-04 23:28:16] 2025-06-05 03:27:57,242 | INFO     | ready for new job
[2025-06-04 23:28:16] 2025-06-05 03:27:57,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:28:16] 2025-06-05 03:27:57,244 | INFO     | **************************************
[2025-06-04 23:28:16] 2025-06-05 03:27:57,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:28:16] 2025-06-05 03:27:57,244 | INFO     | **************************************
[2025-06-04 23:28:16] 2025-06-05 03:27:57,244 | INFO     | 
[2025-06-04 23:28:16] 2025-06-05 03:27:57,262 | INFO     | architecture information:
[2025-06-04 23:28:16] 2025-06-05 03:27:57,262 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:28:16] 2025-06-05 03:27:57,277 | INFO     | cat /etc/os-release:
[2025-06-04 23:28:16] NAME="CentOS Linux"
[2025-06-04 23:28:16] VERSION="7 (Core)"
[2025-06-04 23:28:16] ID="centos"
[2025-06-04 23:28:16] ID_LIKE="rhel fedora"
[2025-06-04 23:28:16] VERSION_ID="7"
[2025-06-04 23:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:28:16] ANSI_COLOR="0;31"
[2025-06-04 23:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:28:16] HOME_URL="https://www.centos.org/"
[2025-06-04 23:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:28:16] 
[2025-06-04 23:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:28:16] 
[2025-06-04 23:28:16] 2025-06-05 03:27:57,278 | INFO     | **************************************
[2025-06-04 23:28:16] 2025-06-05 03:27:57,781 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 23:28:16] 2025-06-05 03:27:57,797 | INFO     | sufficient remaining disk space (173061177344 B)
[2025-06-04 23:28:16] 2025-06-05 03:27:57,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:28:16] 2025-06-05 03:27:57,797 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | INFO     | update_server=False
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:28:16] 2025-06-05 03:27:57,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:28:16] 2025-06-05 03:27:57,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:28:16] 2025-06-05 03:27:57,801 | INFO     | aborting loop
[2025-06-04 23:28:16] 2025-06-05 03:27:58,210 | INFO     | all data control threads have been joined
[2025-06-04 23:28:16] 2025-06-05 03:27:58,510 | INFO     | all job control threads have been joined
[2025-06-04 23:28:16] 2025-06-05 03:27:58,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:28:16] 2025-06-05 03:27:58,799 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:58,806 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:58,913 | INFO     | all payload control threads have been joined
[2025-06-04 23:28:16] 2025-06-05 03:27:58,985 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,052 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,109 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,215 | INFO     | [data] control thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,267 | INFO     | [job] validate thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,277 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,516 | INFO     | [job] control thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,642 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,918 | INFO     | [payload] control thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:27:59,965 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:28:00,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:28:16] 2025-06-05 03:28:00,641 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:28:01,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:28:16] 2025-06-05 03:28:01,610 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:28:05,182 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:28:08,534 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:28:16] 2025-06-05 03:28:09,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:28:16] 2025-06-05 03:28:11,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459928233792)>', '<ExcThread(monitor, started 140459422758656)>']
[2025-06-04 23:28:16] 2025-06-05 03:28:11,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:28:16] 2025-06-05 03:28:11,871 | INFO     | [monitor] control thread has ended
[2025-06-04 23:28:16] 2025-06-05 03:28:16,295 | INFO     | all workflow threads have been joined
[2025-06-04 23:28:16] 2025-06-05 03:28:16,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:28:16] 2025-06-05 03:28:16,295 | INFO     | traces error code: 0
[2025-06-04 23:28:16] 2025-06-05 03:28:16,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:28:16] 2025-06-05 03:28:16,437 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:28:16] 2025-06-05 03:28:16,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:28:16] 2025-06-05 03:28:16,443 [wrapper] pilotpid: 3469959
[2025-06-04 23:28:16] 2025-06-05 03:28:16,445 [wrapper] Pilot exit status: 0
[2025-06-04 23:28:16] 2025-06-05 03:28:16,453 [wrapper] pandaids: 6668686962
[2025-06-04 23:28:16] 2025-06-05 03:28:16,595 [wrapper] cleanup supervisor_pilot 1305989 3469962
[2025-06-04 23:28:16] 2025-06-05 03:28:16,598 [wrapper] Test setup, not cleaning
[2025-06-04 23:28:16] 2025-06-05 03:28:16,601 [wrapper] apfmon messages muted
[2025-06-04 23:28:16] 2025-06-05 03:28:16,604 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:28:16] 2025-06-05 03:28:16,606 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:28:16]  *** Error codes and diagnostics ***
[2025-06-04 23:28:16]     "exeErrorCode": 0,
[2025-06-04 23:28:16]     "exeErrorDiag": "",
[2025-06-04 23:28:16]     "pilotErrorCode": 0,
[2025-06-04 23:28:16]     "pilotErrorDiag": "",
[2025-06-04 23:28:16]  *** Listing of results directory ***
[2025-06-04 23:28:16] total 420328
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas      5111 May 28 11:29 queuedata.json
[2025-06-04 23:28:16] -rwx------. 1 boincer umatlas     37140 May 28 11:30 runpilot2-wrapper.sh
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:28:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:18 run_atlas
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:18 job.xml
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas 225872643 Jun  4 22:18 EVNT.44871834._001880.pool.root.1
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:18 start_atlas.sh
[2025-06-04 23:28:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:18 shared
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 22:18 input.tar.gz
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:18 boinc_lockfile
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:18 pandaJob.out
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas    987109 Jun  4 22:18 agis_schedconf.cvmfs.json
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:28:16] drwx------. 4 boincer umatlas      4096 Jun  4 22:18 pilot3
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 23:21 init_data.xml
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas 199305088 Jun  4 23:27 HITS.44871837._086355.pool.root.1
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:27 boinc_task_state.xml
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas      1037 Jun  4 23:27 memory_monitor_summary.json
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas    294427 Jun  4 23:27 log.44871837._086355.job.log.tgz.1
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas        95 Jun  4 23:27 pilot_heartbeat.json
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas      7686 Jun  4 23:27 heartbeat.json
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:28 wrapper_checkpoint.txt
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:28 boinc_mmap_file
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas      4549 Jun  4 23:28 pilotlog.txt
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas    409275 Jun  4 23:28 log.44871837._086355.job.log.1
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas       357 Jun  4 23:28 output.list
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:28 runtime_log
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas    727040 Jun  4 23:28 result.tar.gz
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 23:28 runtime_log.err
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas       650 Jun  4 23:28 kKCNDmduXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3RcKDmKdPDYo.diag
[2025-06-04 23:28:16] -rw-r--r--. 1 boincer umatlas     21368 Jun  4 23:28 stderr.txt
[2025-06-04 23:28:16] HITS file was successfully produced:
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas 199305088 Jun  4 23:27 shared/HITS.pool.root.1
[2025-06-04 23:28:16]  *** Contents of shared directory: ***
[2025-06-04 23:28:16] total 416448
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas 225872643 Jun  4 22:18 ATLAS.root_0
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:18 start_atlas.sh
[2025-06-04 23:28:16] -rw-r--r--. 2 boincer umatlas    508889 Jun  4 22:18 input.tar.gz
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas 199305088 Jun  4 23:27 HITS.pool.root.1
[2025-06-04 23:28:16] -rw-------. 1 boincer umatlas    727040 Jun  4 23:28 result.tar.gz
23:28:18 (3459232): run_atlas exited; CPU time 29482.961252
23:28:18 (3459232): called boinc_finish(0)

</stderr_txt>
]]>

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