Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:48 (3570344): wrapper (7.7.26015): starting
16:36:48 (3570344): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 16:36:48] Arguments: --nthreads 12
[2025-06-04 16:36:48] Threads: 12
[2025-06-04 16:36:48] Checking for CVMFS
[2025-06-04 16:36:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:36:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:36:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:36:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:36:48] 2.12.6.0 5616 1309 119492 146793 3 20 26211896 32935937 7831 16776704 0 6056558 99.647 4032355 33042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:36:48] CVMFS is ok
[2025-06-04 16:36:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:36:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:36:48] Further information can be found at the LHC@home message board.
[2025-06-04 16:36:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:36:48] Checking for apptainer binary...
[2025-06-04 16:36:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:36:48] Running /usr/bin/apptainer --version
[2025-06-04 16:36:48] apptainer version 1.4.1-1.el9
[2025-06-04 16:36:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:36:48] c6-1-24-1.aglt2.org
[2025-06-04 16:36:48] apptainer works
[2025-06-04 16:36:48] Set ATHENA_PROC_NUMBER=12
[2025-06-04 16:36:48] Set ATHENA_CORE_NUMBER=12
[2025-06-04 16:36:48] Starting ATLAS job with PandaID=6668531311
[2025-06-04 16:36:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:45:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:45:26]  filetype=log
[2025-06-04 17:45:26]  guid=0b5e52b4-b331-449a-b43d-b20e97b49083
[2025-06-04 17:45:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:45:26]  is_altstaged=None
[2025-06-04 17:45:26]  is_tar=False
[2025-06-04 17:45:26]  lfn=log.44871837._085137.job.log.tgz.1
[2025-06-04 17:45:26]  mtime=0
[2025-06-04 17:45:26]  protocol_id=None
[2025-06-04 17:45:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:45:26]  replicas=None
[2025-06-04 17:45:26]  scope=mc23_13p6TeV
[2025-06-04 17:45:26]  status=None
[2025-06-04 17:45:26]  status_code=0
[2025-06-04 17:45:26]  storage_token=
[2025-06-04 17:45:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668531311/log.44871837._085137.job.log.tgz.1
[2025-06-04 17:45:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/ed/log.44871837._085137.job.log.tgz.1
[2025-06-04 17:45:26]  workdir=None
[2025-06-04 17:45:26] ]
[2025-06-04 17:45:26] 2025-06-04 21:45:05,188 | INFO     | transferring file log.44871837._085137.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668531311/log.44871837._085137.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 17:45:26] 2025-06-04 21:45:05,188 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668531311/log.44871837._085137.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._085137.job
[2025-06-04 17:45:26] 2025-06-04 21:45:05,208 | INFO     | adding to output.list: log.44871837._085137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/ed/log.44871837._085137.job.log.tg
[2025-06-04 17:45:26] 2025-06-04 21:45:05,209 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:45:26] 2025-06-04 21:45:05,209 | INFO     | summary of transferred files:
[2025-06-04 17:45:26] 2025-06-04 21:45:05,209 | INFO     |  -- lfn=log.44871837._085137.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:45:26] 2025-06-04 21:45:05,209 | INFO     | stage-out finished correctly
[2025-06-04 17:45:26] 2025-06-04 21:45:05,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:45:26] 2025-06-04 21:45:06,016 | INFO     | monitor loop #308: job 0:6668531311 is in state 'finished'
[2025-06-04 17:45:26] 2025-06-04 21:45:06,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:45:26] 2025-06-04 21:45:07,230 | INFO     | job 6668531311 has state=finished
[2025-06-04 17:45:26] 2025-06-04 21:45:07,231 | INFO     | preparing for final server update for job 6668531311 in state='finished'
[2025-06-04 17:45:26] 2025-06-04 21:45:07,231 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:45:26] 2025-06-04 21:45:07,232 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:45:26] 2025-06-04 21:45:07,232 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:45:26] 2025-06-04 21:45:07,232 | INFO     | job 6668531311 has finished - writing final server update
[2025-06-04 17:45:26] 2025-06-04 21:45:07,232 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:45:26] 2025-06-04 21:45:07,248 | INFO     | executing command: lscpu
[2025-06-04 17:45:26] 2025-06-04 21:45:07,302 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:45:26] 2025-06-04 21:45:08,519 | INFO     | monitor loop #309: job 0:6668531311 is in state 'finished'
[2025-06-04 17:45:26] 2025-06-04 21:45:08,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,006 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 17:45:26] 2025-06-04 21:45:11,006 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531311/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,008 | INFO     | extracted standard info from prmon json
[2025-06-04 17:45:26] 2025-06-04 21:45:11,008 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:45:26] 2025-06-04 21:45:11,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:45:26] 2025-06-04 21:45:11,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:45:26] 2025-06-04 21:45:11,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:45:26] 2025-06-04 21:45:11,012 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:45:26] 2025-06-04 21:45:11,012 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,013 | INFO     | sum of deviations: -10528323334.5
[2025-06-04 17:45:26] 2025-06-04 21:45:11,013 | INFO     | mean x: 1749071549.5
[2025-06-04 17:45:26] 2025-06-04 21:45:11,013 | INFO     | mean y: 2635678.283333333
[2025-06-04 17:45:26] 2025-06-04 21:45:11,013 | INFO     | -- intersect: 275016930659.7556
[2025-06-04 17:45:26] 2025-06-04 21:45:11,013 | INFO     | intersect: 275016930659.7556
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | chi2: 0.11772251781048514
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | -- intersect: 275016930659.7556
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | current memory leak: -157.23 B/s (using 60 data points, chi2=0.12)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | ..............................
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | . Timing measurements:
[2025-06-04 17:45:26] 2025-06-04 21:45:11,014 | INFO     | . get job = 0 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . initial setup = 2 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . payload setup = 6 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . stage-in = 0 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . payload execution = 4059 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . stage-out = 0 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | . log creation = 0 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,015 | INFO     | ..............................
[2025-06-04 17:45:26] 2025-06-04 21:45:11,067 | INFO     | 
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | job summary report
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | --------------------------------------------------
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | PanDA job id: 6668531311
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | task id: 44871837
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | errors: (none)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | pilot state: finished 
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | transexitcode: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | exeerrorcode: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | exeerrordiag: 
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | exitcode: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,068 | INFO     | exitmsg: OK
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | cpuconsumptiontime: 44967 s
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | nevents: 400
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | neventsw: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | pid: 3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | pgrp: 3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | corecount: 12
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | event service: False
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | sizes: {0: 2396563, 1: 2397419, 5: 2397625, 12: 2397681, 4069: 2423510, 4070: 2432451, 4071: 2432635, 4076: 2432805}
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | --------------------------------------------------
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | 
[2025-06-04 17:45:26] 2025-06-04 21:45:11,069 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 17:45:26] 2025-06-04 21:45:11,087 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | job 6668531311 has completed (purged errors)
[2025-06-04 17:45:26] 2025-06-04 21:45:11,089 | INFO     | overall cleanup function is called
[2025-06-04 17:45:26] 2025-06-04 21:45:11,654 | INFO     | PID=3574598 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:45:26] 2025-06-04 21:45:11,655 | INFO     | .. there are 8 such processes running
[2025-06-04 17:45:26] 2025-06-04 21:45:12,097 | INFO     | --- collectZombieJob: --- 10, [3583224]
[2025-06-04 17:45:26] 2025-06-04 21:45:12,097 | INFO     | zombie collector waiting for pid 3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:12,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:45:26] 2025-06-04 21:45:12,097 | INFO     | collected zombie processes
[2025-06-04 17:45:26] 2025-06-04 21:45:12,097 | INFO     | will attempt to kill all subprocesses of pid=3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:12,344 | INFO     | process IDs to be killed: [3583224] (in reverse order)
[2025-06-04 17:45:26] 2025-06-04 21:45:12,421 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:45:26] 2025-06-04 21:45:12,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:45:26] 2025-06-04 21:45:12,430 | INFO     | did not find any defunct processes belonging to 3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:12,438 | INFO     | did not find any defunct processes belonging to 3583224
[2025-06-04 17:45:26] 2025-06-04 21:45:12,439 | INFO     | ready for new job
[2025-06-04 17:45:26] 2025-06-04 21:45:12,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:45:26] 2025-06-04 21:45:12,441 | INFO     | **************************************
[2025-06-04 17:45:26] 2025-06-04 21:45:12,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:45:26] 2025-06-04 21:45:12,441 | INFO     | **************************************
[2025-06-04 17:45:26] 2025-06-04 21:45:12,441 | INFO     | 
[2025-06-04 17:45:26] 2025-06-04 21:45:12,458 | INFO     | architecture information:
[2025-06-04 17:45:26] 2025-06-04 21:45:12,459 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:45:26] 2025-06-04 21:45:12,477 | INFO     | cat /etc/os-release:
[2025-06-04 17:45:26] NAME="CentOS Linux"
[2025-06-04 17:45:26] VERSION="7 (Core)"
[2025-06-04 17:45:26] ID="centos"
[2025-06-04 17:45:26] ID_LIKE="rhel fedora"
[2025-06-04 17:45:26] VERSION_ID="7"
[2025-06-04 17:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:45:26] ANSI_COLOR="0;31"
[2025-06-04 17:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:45:26] HOME_URL="https://www.centos.org/"
[2025-06-04 17:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:45:26] 
[2025-06-04 17:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:45:26] 
[2025-06-04 17:45:26] 2025-06-04 21:45:12,477 | INFO     | **************************************
[2025-06-04 17:45:26] 2025-06-04 21:45:12,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 17:45:26] 2025-06-04 21:45:13,001 | INFO     | sufficient remaining disk space (76474744832 B)
[2025-06-04 17:45:26] 2025-06-04 21:45:13,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:45:26] 2025-06-04 21:45:13,001 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:45:26] 2025-06-04 21:45:13,001 | INFO     | update_server=False
[2025-06-04 17:45:26] 2025-06-04 21:45:13,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:45:26] 2025-06-04 21:45:13,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:45:26] 2025-06-04 21:45:13,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:45:26] 2025-06-04 21:45:13,003 | INFO     | aborting loop
[2025-06-04 17:45:26] 2025-06-04 21:45:13,083 | INFO     | all data control threads have been joined
[2025-06-04 17:45:26] 2025-06-04 21:45:13,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:45:26] 2025-06-04 21:45:13,660 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:45:26] 2025-06-04 21:45:13,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:45:26] 2025-06-04 21:45:13,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:45:26] 2025-06-04 21:45:13,803 | INFO     | all payload control threads have been joined
[2025-06-04 17:45:26] 2025-06-04 21:45:14,007 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,007 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,008 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,089 | INFO     | [data] control thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,185 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,404 | INFO     | all job control threads have been joined
[2025-06-04 17:45:26] 2025-06-04 21:45:14,448 | INFO     | [job] validate thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,626 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,756 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,806 | INFO     | [payload] control thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,973 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:14,976 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:15,092 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:15,314 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:15,409 | INFO     | [job] control thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:16,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:45:26] 2025-06-04 21:45:20,160 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:45:26] 2025-06-04 21:45:21,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719953676096)>', '<ExcThread(monitor, started 139719245559552)>']
[2025-06-04 17:45:26] 2025-06-04 21:45:21,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:45:26] 2025-06-04 21:45:21,700 | INFO     | [monitor] control thread has ended
[2025-06-04 17:45:26] 2025-06-04 21:45:26,331 | INFO     | all workflow threads have been joined
[2025-06-04 17:45:26] 2025-06-04 21:45:26,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:45:26] 2025-06-04 21:45:26,332 | INFO     | traces error code: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:26,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:45:26] 2025-06-04 21:45:26,499 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:45:26] 2025-06-04 21:45:26,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:45:26] 2025-06-04 21:45:26,505 [wrapper] pilotpid: 3574598
[2025-06-04 17:45:26] 2025-06-04 21:45:26,508 [wrapper] Pilot exit status: 0
[2025-06-04 17:45:26] 2025-06-04 21:45:26,520 [wrapper] pandaids: 6668531311
[2025-06-04 17:45:26] 2025-06-04 21:45:26,573 [wrapper] cleanup supervisor_pilot 3718038 3574599
[2025-06-04 17:45:26] 2025-06-04 21:45:26,576 [wrapper] Test setup, not cleaning
[2025-06-04 17:45:26] 2025-06-04 21:45:26,579 [wrapper] apfmon messages muted
[2025-06-04 17:45:26] 2025-06-04 21:45:26,582 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:45:26] 2025-06-04 21:45:26,585 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:45:26]  *** Error codes and diagnostics ***
[2025-06-04 17:45:26]     "exeErrorCode": 0,
[2025-06-04 17:45:26]     "exeErrorDiag": "",
[2025-06-04 17:45:26]     "pilotErrorCode": 0,
[2025-06-04 17:45:26]     "pilotErrorDiag": "",
[2025-06-04 17:45:26]  *** Listing of results directory ***
[2025-06-04 17:45:26] total 420976
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:50 queuedata.json
[2025-06-04 17:45:26] -rwx------. 1 boincer umatlas     37140 May 28 09:50 runpilot2-wrapper.sh
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:45:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:36 run_atlas
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:36 job.xml
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas 224404465 Jun  4 16:36 EVNT.44871834._003319.pool.root.1
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:36 start_atlas.sh
[2025-06-04 17:45:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 16:36 shared
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 16:36 input.tar.gz
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:36 boinc_lockfile
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 16:36 pandaJob.out
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas    987032 Jun  4 16:36 agis_schedconf.cvmfs.json
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas   1598969 Jun  4 16:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:45:26] drwx------. 4 boincer umatlas      4096 Jun  4 16:36 pilot3
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 17:38 init_data.xml
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas       529 Jun  4 17:44 boinc_task_state.xml
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas 201262563 Jun  4 17:44 HITS.44871837._085137.pool.root.1
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas      1049 Jun  4 17:45 memory_monitor_summary.json
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas        95 Jun  4 17:45 pilot_heartbeat.json
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas    374908 Jun  4 17:45 log.44871837._085137.job.log.tgz.1
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas      7725 Jun  4 17:45 heartbeat.json
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 17:45 boinc_mmap_file
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas        27 Jun  4 17:45 wrapper_checkpoint.txt
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas      4353 Jun  4 17:45 pilotlog.txt
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas    413682 Jun  4 17:45 log.44871837._085137.job.log.1
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas       357 Jun  4 17:45 output.list
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas       620 Jun  4 17:45 runtime_log
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas    808960 Jun  4 17:45 result.tar.gz
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 17:45 runtime_log.err
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas       655 Jun  4 17:45 OamLDm8LWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZHcKDmPfplpm.diag
[2025-06-04 17:45:26] -rw-r--r--. 1 boincer umatlas     21297 Jun  4 17:45 stderr.txt
[2025-06-04 17:45:26] HITS file was successfully produced:
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas 201262563 Jun  4 17:44 shared/HITS.pool.root.1
[2025-06-04 17:45:26]  *** Contents of shared directory: ***
[2025-06-04 17:45:26] total 417012
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas 224404465 Jun  4 16:36 ATLAS.root_0
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:36 start_atlas.sh
[2025-06-04 17:45:26] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 16:36 input.tar.gz
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas 201262563 Jun  4 17:44 HITS.pool.root.1
[2025-06-04 17:45:26] -rw-------. 1 boincer umatlas    808960 Jun  4 17:45 result.tar.gz
17:45:28 (3570344): run_atlas exited; CPU time 45009.330484
17:45:28 (3570344): called boinc_finish(0)

</stderr_txt>
]]>

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