Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:48 (27093): wrapper (7.7.26015): starting
18:54:48 (27093): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:54:48] Arguments: --nthreads 8
[2025-06-04 18:54:48] Threads: 8
[2025-06-04 18:54:48] Checking for CVMFS
[2025-06-04 18:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:54:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:54:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:54:50] 2.11.2.0 15599 33487 89780 146788 2 158 22090257 25165825 3240 130560 0 17670569 99.787 20086832 2004 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:54:50] CVMFS is ok
[2025-06-04 18:54:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:54:50] Checking for apptainer binary...
[2025-06-04 18:54:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:54:50] Running /usr/bin/apptainer --version
[2025-06-04 18:54:51] apptainer version 1.3.2-1.el7
[2025-06-04 18:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:55:03] cg-vwn263.simple-grid.lan
[2025-06-04 18:55:03] apptainer works
[2025-06-04 18:55:03] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:55:03] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:55:03] Starting ATLAS job with PandaID=6678151033
[2025-06-04 18:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:59:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:59:47] 2025-06-04 20:37:33,816 | INFO     | monitor loop #934: job 0:6678151033 is in state 'finished'
[2025-06-04 22:59:47] 2025-06-04 20:37:33,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:59:47] 2025-06-04 20:37:36,324 | INFO     | monitor loop #935: job 0:6678151033 is in state 'finished'
[2025-06-04 22:59:47] 2025-06-04 20:37:36,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:59:47] 2025-06-04 20:37:38,829 | INFO     | monitor loop #936: job 0:6678151033 is in state 'finished'
[2025-06-04 22:59:47] 2025-06-04 20:37:38,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,277 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 22:59:47] 2025-06-04 20:37:40,277 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6678151033/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,278 | INFO     | extracted standard info from prmon json
[2025-06-04 22:59:47] 2025-06-04 20:37:40,278 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:59:47] 2025-06-04 20:37:40,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:59:47] 2025-06-04 20:37:40,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:59:47] 2025-06-04 20:37:40,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:59:47] 2025-06-04 20:37:40,284 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:59:47] 2025-06-04 20:37:40,284 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,286 | INFO     | sum of deviations: 39178769876.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,286 | INFO     | mean x: 1749062756.5
[2025-06-04 22:59:47] 2025-06-04 20:37:40,286 | INFO     | mean y: 2470251.574074074
[2025-06-04 22:59:47] 2025-06-04 20:37:40,286 | INFO     | -- intersect: -21926882793.357063
[2025-06-04 22:59:47] 2025-06-04 20:37:40,287 | INFO     | intersect: -21926882793.357063
[2025-06-04 22:59:47] 2025-06-04 20:37:40,287 | INFO     | chi2: 1.913589800307965
[2025-06-04 22:59:47] 2025-06-04 20:37:40,287 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,289 | INFO     | sum of deviations: 37738936490.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,289 | INFO     | mean x: 1749062604.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,289 | INFO     | mean y: 2469218.5071090045
[2025-06-04 22:59:47] 2025-06-04 20:37:40,290 | INFO     | -- intersect: -22658525874.51566
[2025-06-04 22:59:47] 2025-06-04 20:37:40,290 | INFO     | intersect: -22658525874.51566
[2025-06-04 22:59:47] 2025-06-04 20:37:40,291 | INFO     | chi2: 1.9149154265851964
[2025-06-04 22:59:47] 2025-06-04 20:37:40,291 | INFO     | current chi2=1.9149154265851964 (change=-0.06927431767341612 %)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,291 | INFO     | right removable region: 210
[2025-06-04 22:59:47] 2025-06-04 20:37:40,292 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,294 | INFO     | sum of deviations: -1434555178.0000002
[2025-06-04 22:59:47] 2025-06-04 20:37:40,294 | INFO     | mean x: 1749062909.0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,294 | INFO     | mean y: 2499222.8009478673
[2025-06-04 22:59:47] 2025-06-04 20:37:40,297 | INFO     | -- intersect: 863902763.5906311
[2025-06-04 22:59:47] 2025-06-04 20:37:40,297 | INFO     | intersect: 863902763.5906311
[2025-06-04 22:59:47] 2025-06-04 20:37:40,298 | INFO     | chi2: 0.08816463398940105
[2025-06-04 22:59:47] 2025-06-04 20:37:40,298 | INFO     | current chi2=0.08816463398940105 (change=95.39270987046376 %)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,298 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 22:59:47] 2025-06-04 20:37:40,300 | INFO     | sum of deviations: 933556688.0000004
[2025-06-04 22:59:47] 2025-06-04 20:37:40,300 | INFO     | mean x: 1749063061.5
[2025-06-04 22:59:47] 2025-06-04 20:37:40,300 | INFO     | mean y: 2497397.019417476
[2025-06-04 22:59:47] 2025-06-04 20:37:40,300 | INFO     | -- intersect: -599890602.8573235
[2025-06-04 22:59:47] 2025-06-04 20:37:40,300 | INFO     | intersect: -599890602.8573235
[2025-06-04 22:59:47] 2025-06-04 20:37:40,301 | INFO     | chi2: 0.0701223780423052
[2025-06-04 22:59:47] 2025-06-04 20:37:40,301 | INFO     | current chi2=0.0701223780423052 (change=20.464278169934726 %)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,301 | INFO     | left removable region: 20
[2025-06-04 22:59:47] 2025-06-04 20:37:40,301 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 22:59:47] 2025-06-04 20:37:40,303 | INFO     | sum of deviations: 9318736247.999998
[2025-06-04 22:59:47] 2025-06-04 20:37:40,303 | INFO     | mean x: 1749063183.5
[2025-06-04 22:59:47] 2025-06-04 20:37:40,303 | INFO     | mean y: 2489346.642105263
[2025-06-04 22:59:47] 2025-06-04 20:37:40,303 | INFO     | -- intersect: -7661154646.847348
[2025-06-04 22:59:47] 2025-06-04 20:37:40,303 | INFO     | intersect: -7661154646.847348
[2025-06-04 22:59:47] 2025-06-04 20:37:40,304 | INFO     | chi2: 0.0004288565232207518
[2025-06-04 22:59:47] 2025-06-04 20:37:40,304 | INFO     | -- intersect: -7661154646.847348
[2025-06-04 22:59:47] 2025-06-04 20:37:40,304 | INFO     | current memory leak: 4.38 B/s (using 190 data points, chi2=0.00)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,305 | INFO     | ..............................
[2025-06-04 22:59:47] 2025-06-04 20:37:40,305 | INFO     | . Timing measurements:
[2025-06-04 22:59:47] 2025-06-04 20:37:40,311 | INFO     | . get job = 0 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,311 | INFO     | . initial setup = 2 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,311 | INFO     | . payload setup = 15 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,312 | INFO     | . stage-in = 0 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,312 | INFO     | . payload execution = 13195 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,312 | INFO     | . stage-out = 3 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,312 | INFO     | . log creation = 1 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,312 | INFO     | ..............................
[2025-06-04 22:59:47] 2025-06-04 20:37:40,466 | INFO     | 
[2025-06-04 22:59:47] 2025-06-04 20:37:40,466 | INFO     | job summary report
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | --------------------------------------------------
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | PanDA job id: 6678151033
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | task id: 45006595
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | errors: (none)
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | pilot state: finished 
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | transexitcode: 0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | exeerrorcode: 0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | exeerrordiag: 
[2025-06-04 22:59:47] 2025-06-04 20:37:40,467 | INFO     | exitcode: 0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | exitmsg: OK
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | cpuconsumptiontime: 50117 s
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | nevents: 400
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | neventsw: 0
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | pid: 8543
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | pgrp: 8543
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | corecount: 8
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | event service: False
[2025-06-04 22:59:47] 2025-06-04 20:37:40,468 | INFO     | sizes: {0: 2397166, 1: 2397365, 12: 2397365, 14: 2397599, 23: 2397627, 13214: 2427295, 13217: 2436294, 13304: 2436408}
[2025-06-04 22:59:47] 2025-06-04 20:37:40,469 | INFO     | --------------------------------------------------
[2025-06-04 22:59:47] 2025-06-04 20:37:40,469 | INFO     | 
[2025-06-04 22:59:47] 2025-06-04 20:37:40,469 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 22:59:47] 2025-06-04 20:37:41,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | job 6678151033 has completed (purged errors)
[2025-06-04 22:59:47] 2025-06-04 20:37:41,021 | INFO     | overall cleanup function is called
[2025-06-04 22:59:47] 2025-06-04 20:37:42,030 | INFO     | --- collectZombieJob: --- 10, [8543]
[2025-06-04 22:59:47] 2025-06-04 20:37:42,030 | INFO     | zombie collector waiting for pid 8543
[2025-06-04 22:59:47] 2025-06-04 20:37:42,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:59:47] 2025-06-04 20:37:42,031 | INFO     | collected zombie processes
[2025-06-04 22:59:47] 2025-06-04 20:37:42,031 | INFO     | will attempt to kill all subprocesses of pid=8543
[2025-06-04 22:59:47] 2025-06-04 20:37:42,168 | INFO     | process IDs to be killed: [8543] (in reverse order)
[2025-06-04 22:59:47] 2025-06-04 20:37:42,947 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:59:47] 2025-06-04 20:37:42,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:59:47] 2025-06-04 20:37:42,951 | INFO     | did not find any defunct processes belonging to 8543
[2025-06-04 22:59:47] 2025-06-04 20:37:42,954 | INFO     | did not find any defunct processes belonging to 8543
[2025-06-04 22:59:47] 2025-06-04 20:37:42,955 | INFO     | ready for new job
[2025-06-04 22:59:47] 2025-06-04 20:37:42,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:59:47] 2025-06-04 20:37:42,957 | INFO     | **************************************
[2025-06-04 22:59:47] 2025-06-04 20:37:42,957 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:59:47] 2025-06-04 20:37:42,957 | INFO     | **************************************
[2025-06-04 22:59:47] 2025-06-04 20:37:42,957 | INFO     | 
[2025-06-04 22:59:47] 2025-06-04 20:37:42,958 | INFO     | pilot is running in a VM
[2025-06-04 22:59:47] 2025-06-04 20:37:42,958 | INFO     | architecture information:
[2025-06-04 22:59:47] 2025-06-04 20:37:42,972 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:59:47] 2025-06-04 20:37:43,135 | INFO     | cat /etc/os-release:
[2025-06-04 22:59:47] NAME="CentOS Linux"
[2025-06-04 22:59:47] VERSION="7 (Core)"
[2025-06-04 22:59:47] ID="centos"
[2025-06-04 22:59:47] ID_LIKE="rhel fedora"
[2025-06-04 22:59:47] VERSION_ID="7"
[2025-06-04 22:59:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:59:47] ANSI_COLOR="0;31"
[2025-06-04 22:59:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:59:47] HOME_URL="https://www.centos.org/"
[2025-06-04 22:59:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:59:47] 
[2025-06-04 22:59:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:59:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:59:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:59:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:59:47] 
[2025-06-04 22:59:47] 2025-06-04 20:37:43,135 | INFO     | **************************************
[2025-06-04 22:59:47] 2025-06-04 20:37:43,640 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 22:59:47] 2025-06-04 20:37:43,878 | INFO     | sufficient remaining disk space (497260953600 B)
[2025-06-04 22:59:47] 2025-06-04 20:37:43,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:59:47] 2025-06-04 20:37:43,879 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:59:47] 2025-06-04 20:37:43,879 | INFO     | update_server=False
[2025-06-04 22:59:47] 2025-06-04 20:37:43,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:59:47] 2025-06-04 20:37:44,383 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:59:47] 2025-06-04 20:37:44,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:59:47] 2025-06-04 20:37:44,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:59:47] 2025-06-04 20:37:44,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:59:47] 2025-06-04 20:37:44,723 | INFO     | all payload control threads have been joined
[2025-06-04 22:59:47] 2025-06-04 20:37:44,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:59:47] 2025-06-04 20:37:44,850 | INFO     | aborting loop
[2025-06-04 22:59:47] 2025-06-04 20:37:44,885 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:44,948 | INFO     | all data control threads have been joined
[2025-06-04 22:59:47] 2025-06-04 20:37:45,207 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:45,267 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:45,325 | INFO     | all job control threads have been joined
[2025-06-04 22:59:47] 2025-06-04 20:37:45,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:59:47] 2025-06-04 20:37:45,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:59:47] 2025-06-04 20:37:45,729 | INFO     | [payload] control thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:45,856 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:45,954 | INFO     | [data] control thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,064 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,127 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,211 | INFO     | [job] validate thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,257 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,331 | INFO     | [job] control thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,360 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,486 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:46,669 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:49,723 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:54,383 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:59:47] 2025-06-04 20:37:55,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:59:47] 2025-06-04 20:37:55,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321646532416)>', '<ExcThread(monitor, started 140321069459200)>']
[2025-06-04 22:59:47] 2025-06-04 20:37:56,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:59:47] 2025-06-04 20:37:56,454 | INFO     | [monitor] control thread has ended
[2025-06-04 22:59:47] 2025-06-04 20:38:00,578 | INFO     | all workflow threads have been joined
[2025-06-04 22:59:47] 2025-06-04 20:38:00,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:59:47] 2025-06-04 20:38:00,579 | INFO     | traces error code: 0
[2025-06-04 22:59:47] 2025-06-04 20:38:00,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:59:47] 2025-06-04 20:38:00,986 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:59:47] 2025-06-04 20:38:01,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:59:47] 2025-06-04 20:38:01,160 [wrapper] pilotpid: 32380
[2025-06-04 22:59:47] 2025-06-04 20:38:01,274 [wrapper] Pilot exit status: 0
[2025-06-04 22:59:47] 2025-06-04 20:38:01,774 [wrapper] pandaids: 6678151033
[2025-06-04 22:59:47] 2025-06-04 20:38:02,667 [wrapper] cleanup supervisor_pilot  1978 32381
[2025-06-04 22:59:47] 2025-06-04 20:38:02,761 [wrapper] Test setup, not cleaning
[2025-06-04 22:59:47] 2025-06-04 20:38:02,833 [wrapper] apfmon messages muted
[2025-06-04 22:59:47] 2025-06-04 20:38:02,945 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:59:47] 2025-06-04 20:38:03,038 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:59:47]  *** Error codes and diagnostics ***
[2025-06-04 22:59:47]     "exeErrorCode": 0,
[2025-06-04 22:59:47]     "exeErrorDiag": "",
[2025-06-04 22:59:47]     "pilotErrorCode": 0,
[2025-06-04 22:59:47]     "pilotErrorDiag": "",
[2025-06-04 22:59:47]  *** Listing of results directory ***
[2025-06-04 22:59:47] total 389348
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:27 queuedata.json
[2025-06-04 22:59:47] -rwx------. 1 boinc boinc     37140 Jun  4 00:27 runpilot2-wrapper.sh
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:59:47] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:54 run_atlas
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:54 job.xml
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc 215080399 Jun  4 18:54 EVNT.45006593._001882.pool.root.1
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc      6391 Jun  4 18:54 init_data.xml
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:54 start_atlas.sh
[2025-06-04 22:59:47] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:54 shared
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc    508879 Jun  4 18:54 input.tar.gz
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:54 boinc_lockfile
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc      2522 Jun  4 18:55 pandaJob.out
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc    990984 Jun  4 18:55 agis_schedconf.cvmfs.json
[2025-06-04 22:59:47] drwx------. 4 boinc boinc      4096 Jun  4 18:55 pilot3
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc 176760268 Jun  4 22:35 HITS.45006595._046934.pool.root.1
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:35 boinc_task_state.xml
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc      1014 Jun  4 22:36 memory_monitor_summary.json
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc   1598969 Jun  4 22:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc    362753 Jun  4 22:36 log.45006595._046934.job.log.tgz.1
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc      7694 Jun  4 22:37 heartbeat.json
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc        95 Jun  4 22:37 pilot_heartbeat.json
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc      4489 Jun  4 22:38 pilotlog.txt
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc   1154538 Jun  4 22:38 log.45006595._046934.job.log.1
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc       357 Jun  4 22:38 output.list
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:38 runtime_log
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc   1536000 Jun  4 22:38 result.tar.gz
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc      8673 Jun  4 22:38 runtime_log.err
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc       657 Jun  4 22:38 Ir8NDmEHpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzLmKDmepwKFm.diag
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:59 boinc_mmap_file
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc        28 Jun  4 22:59 wrapper_checkpoint.txt
[2025-06-04 22:59:47] -rw-r--r--. 1 boinc boinc     20703 Jun  4 22:59 stderr.txt
[2025-06-04 22:59:47] HITS file was successfully produced:
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc 176760268 Jun  4 22:35 shared/HITS.pool.root.1
[2025-06-04 22:59:47]  *** Contents of shared directory: ***
[2025-06-04 22:59:47] total 384676
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc 215080399 Jun  4 18:54 ATLAS.root_0
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:54 start_atlas.sh
[2025-06-04 22:59:47] -rw-r--r--. 2 boinc boinc    508879 Jun  4 18:54 input.tar.gz
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc 176760268 Jun  4 22:35 HITS.pool.root.1
[2025-06-04 22:59:47] -rw-------. 1 boinc boinc   1536000 Jun  4 22:38 result.tar.gz
22:59:49 (27093): run_atlas exited; CPU time 50292.914552
22:59:49 (27093): called boinc_finish(0)

</stderr_txt>
]]>

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