Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:14 (2759192): wrapper (7.7.26015): starting
19:04:14 (2759192): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 19:04:14] Arguments: --nthreads 12
[2025-06-03 19:04:14] Threads: 12
[2025-06-03 19:04:14] Checking for CVMFS
[2025-06-03 19:04:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:04:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:04:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:04:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:04:15] 2.11.5.0 676980 23009 257972 146763 1 769 45225315 45568000 15872 130560 0 233589518 99.798 139412096 22913 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 19:04:15] CVMFS is ok
[2025-06-03 19:04:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:04:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:04:15] Further information can be found at the LHC@home message board.
[2025-06-03 19:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:04:15] Checking for apptainer binary...
[2025-06-03 19:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:04:15] Running /usr/bin/apptainer --version
[2025-06-03 19:04:15] apptainer version 1.4.0-1.el9
[2025-06-03 19:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:04:16] wns0104.triumf.lcg
[2025-06-03 19:04:16] apptainer works
[2025-06-03 19:04:16] Set ATHENA_PROC_NUMBER=12
[2025-06-03 19:04:16] Set ATHENA_CORE_NUMBER=12
[2025-06-03 19:04:16] Starting ATLAS job with PandaID=6678156175
[2025-06-03 19:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:09:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | WARNING  | wrong length of table data, x=[1749002770.0], y=[1231.0] (must be same and length>=4)
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . Timing measurements:
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . get job = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . initial setup = 4 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload setup = 19 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-in = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload execution = 46 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-out = 1 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . log creation = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678156175/pilotlog.txt
[2025-06-03 19:09:14] 2025-06-04 02:08:59,050 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 19:09:14] - Log from pilotlog.txt -
[2025-06-03 19:09:14] 2025-06-04 02:08:58,933 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 19:09:14] 2025-06-04 02:08:58,933 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678156175/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | INFO     | extracted standard info from prmon json
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | WARNING  | wrong length of table data, x=[1749002770.0], y=[1231.0] (must be same and length>=4)
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . Timing measurements:
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . get job = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . initial setup = 4 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload setup = 19 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-in = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload execution = 46 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-out = 1 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . log creation = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678156175/pilotlog.txt
[2025-06-03 19:09:14] 2025-06-04 02:08:59,050 | WARNING  | 
[2025-06-03 19:09:14] [begin log extracts]
[2025-06-03 19:09:14] - Log from pilotlog.txt -
[2025-06-03 19:09:14] 2025-06-04 02:08:58,933 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 19:09:14] 2025-06-04 02:08:58,933 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678156175/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | INFO     | extracted standard info from prmon json
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:09:14] 2025-06-04 02:08:58,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | WARNING  | wrong length of table data, x=[1749002770.0], y=[1231.0] (must be same and length>=4)
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . Timing measurements:
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . get job = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,935 | INFO     | . initial setup = 4 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload setup = 19 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-in = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . payload execution = 46 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . stage-out = 1 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | . log creation = 0 s
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | ..............................
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:09:14] 2025-06-04 02:08:58,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678156175/pilotlog.txt
[2025-06-03 19:09:14] [end log extracts]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,051 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 19:09:14] 2025-06-04 02:08:59,051 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | 
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | job summary report
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | --------------------------------------------------
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | PanDA job id: 6678156175
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | task id: 45006595
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 19:06:30,737 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | pilot state: failed 
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | transexitcode: 65
[2025-06-03 19:09:14] 2025-06-04 02:08:59,476 | INFO     | exeerrorcode: 65
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | exitcode: 65
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | nevents: 0
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | neventsw: 0
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | pid: 2772051
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | pgrp: 2772051
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | corecount: 12
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | event service: False
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | sizes: {0: 2404356, 1: 2405038, 2: 2405237, 13: 2405471, 24: 2405499, 69: 2428760, 70: 2428864, 73: 2433127, 74: 2433155, 208: 2433297}
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | --------------------------------------------------
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | 
[2025-06-03 19:09:14] 2025-06-04 02:08:59,477 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 19:09:14] 2025-06-04 02:08:59,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:09:14] 2025-06-04 02:08:59,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:09:14] 2025-06-04 02:08:59,562 | INFO     | job 6678156175 has completed (purged errors)
[2025-06-03 19:09:14] 2025-06-04 02:08:59,562 | INFO     | overall cleanup function is called
[2025-06-03 19:09:14] 2025-06-04 02:09:00,089 | INFO     | PID=2764994 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 19:09:14] 2025-06-04 02:09:00,089 | INFO     | .. there are 34 such processes running
[2025-06-03 19:09:14] 2025-06-04 02:09:00,581 | INFO     | --- collectZombieJob: --- 10, [2772051]
[2025-06-03 19:09:14] 2025-06-04 02:09:00,581 | INFO     | zombie collector waiting for pid 2772051
[2025-06-03 19:09:14] 2025-06-04 02:09:00,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:09:14] 2025-06-04 02:09:00,581 | INFO     | collected zombie processes
[2025-06-03 19:09:14] 2025-06-04 02:09:00,581 | INFO     | will attempt to kill all subprocesses of pid=2772051
[2025-06-03 19:09:14] 2025-06-04 02:09:01,090 | INFO     | 260s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 19:09:14] 2025-06-04 02:09:01,110 | INFO     | process IDs to be killed: [2772051] (in reverse order)
[2025-06-03 19:09:14] 2025-06-04 02:09:01,402 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:09:14] 2025-06-04 02:09:01,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:09:14] 2025-06-04 02:09:01,446 | INFO     | did not find any defunct processes belonging to 2772051
[2025-06-03 19:09:14] 2025-06-04 02:09:01,493 | INFO     | did not find any defunct processes belonging to 2772051
[2025-06-03 19:09:14] 2025-06-04 02:09:01,494 | INFO     | ready for new job
[2025-06-03 19:09:14] 2025-06-04 02:09:01,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:09:14] 2025-06-04 02:09:01,508 | INFO     | **************************************
[2025-06-03 19:09:14] 2025-06-04 02:09:01,508 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:09:14] 2025-06-04 02:09:01,508 | INFO     | **************************************
[2025-06-03 19:09:14] 2025-06-04 02:09:01,508 | INFO     | 
[2025-06-03 19:09:14] 2025-06-04 02:09:01,510 | INFO     | architecture information:
[2025-06-03 19:09:14] 2025-06-04 02:09:01,516 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:09:14] 2025-06-04 02:09:01,608 | INFO     | cat /etc/os-release:
[2025-06-03 19:09:14] NAME="CentOS Linux"
[2025-06-03 19:09:14] VERSION="7 (Core)"
[2025-06-03 19:09:14] ID="centos"
[2025-06-03 19:09:14] ID_LIKE="rhel fedora"
[2025-06-03 19:09:14] VERSION_ID="7"
[2025-06-03 19:09:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:09:14] ANSI_COLOR="0;31"
[2025-06-03 19:09:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:09:14] HOME_URL="https://www.centos.org/"
[2025-06-03 19:09:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:09:14] 
[2025-06-03 19:09:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:09:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:09:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:09:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:09:14] 
[2025-06-03 19:09:14] 2025-06-04 02:09:01,608 | INFO     | **************************************
[2025-06-03 19:09:14] 2025-06-04 02:09:02,112 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 19:09:14] 2025-06-04 02:09:02,158 | INFO     | sufficient remaining disk space (1952314294272 B)
[2025-06-03 19:09:14] 2025-06-04 02:09:02,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:09:14] 2025-06-04 02:09:02,159 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:09:14] 2025-06-04 02:09:02,159 | INFO     | update_server=False
[2025-06-03 19:09:14] 2025-06-04 02:09:02,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:09:14] 2025-06-04 02:09:02,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:09:14] 2025-06-04 02:09:02,160 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:09:14] 2025-06-04 02:09:02,160 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:09:14] 2025-06-04 02:09:02,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:09:14] 2025-06-04 02:09:02,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:09:14] 2025-06-04 02:09:02,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:09:14] 2025-06-04 02:09:02,400 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 19:09:14] 2025-06-04 02:09:02,400 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 19:09:14] 2025-06-04 02:09:02,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:14] 2025-06-04 02:09:02,401 | INFO     | will abort loop
[2025-06-03 19:09:14] 2025-06-04 02:09:02,557 | INFO     | all data control threads have been joined
[2025-06-03 19:09:14] 2025-06-04 02:09:03,042 | INFO     | all job control threads have been joined
[2025-06-03 19:09:14] 2025-06-04 02:09:03,165 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:03,406 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:03,417 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:03,440 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:03,563 | INFO     | [data] control thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:03,584 | INFO     | all payload control threads have been joined
[2025-06-03 19:09:14] 2025-06-04 02:09:04,002 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,048 | INFO     | [job] control thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,067 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,068 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,407 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:14] 2025-06-04 02:09:04,590 | INFO     | [payload] control thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,595 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:04,596 | INFO     | [job] validate thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:05,503 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:06,168 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:09:14] 2025-06-04 02:09:07,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289937438528)>', '<ExcThread(monitor, started 140289251464960)>']
[2025-06-03 19:09:14] 2025-06-04 02:09:08,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:09:14] 2025-06-04 02:09:08,204 | INFO     | [monitor] control thread has ended
[2025-06-03 19:09:14] 2025-06-04 02:09:12,551 | INFO     | all workflow threads have been joined
[2025-06-03 19:09:14] 2025-06-04 02:09:12,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:09:14] 2025-06-04 02:09:12,551 | INFO     | traces error code: 0
[2025-06-03 19:09:14] 2025-06-04 02:09:12,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:09:14] 2025-06-04 02:09:12,810 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:09:14] 2025-06-04 02:09:12,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:09:14] 2025-06-04 02:09:12,860 [wrapper] pilotpid: 2764994
[2025-06-03 19:09:14] 2025-06-04 02:09:12,894 [wrapper] Pilot exit status: 0
[2025-06-03 19:09:14] 2025-06-04 02:09:12,985 [wrapper] pandaids: 6678156175
[2025-06-03 19:09:14] 2025-06-04 02:09:13,381 [wrapper] cleanup supervisor_pilot 2765009 2764995
[2025-06-03 19:09:14] 2025-06-04 02:09:13,395 [wrapper] Test setup, not cleaning
[2025-06-03 19:09:14] 2025-06-04 02:09:13,438 [wrapper] apfmon messages muted
[2025-06-03 19:09:14] 2025-06-04 02:09:13,461 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:09:14] 2025-06-04 02:09:13,492 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:09:14]  *** Error codes and diagnostics ***
[2025-06-03 19:09:14]     "exeErrorCode": 65,
[2025-06-03 19:09:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 19:09:14]     "pilotErrorCode": 1305,
[2025-06-03 19:09:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 19:09:14]  *** Listing of results directory ***
[2025-06-03 19:09:14] total 217336
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:42 pilot3.tar.gz
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:43 queuedata.json
[2025-06-03 19:09:14] -rwx------. 1 boinc boinc     37140 Jun  3 16:43 runpilot2-wrapper.sh
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc       100 Jun  3 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:09:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 19:04 run_atlas
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc       105 Jun  3 19:04 job.xml
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc      6600 Jun  3 19:04 init_data.xml
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc 218512154 Jun  3 19:04 EVNT.45006593._001934.pool.root.1
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:04 start_atlas.sh
[2025-06-03 19:09:14] drwxrwx--x. 2 boinc boinc      4096 Jun  3 19:04 shared
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc    508879 Jun  3 19:04 input.tar.gz
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc         0 Jun  3 19:04 boinc_lockfile
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc      2525 Jun  3 19:04 pandaJob.out
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc    986077 Jun  3 19:04 agis_schedconf.cvmfs.json
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc   1603667 Jun  3 19:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:09:14] drwx------. 4 boinc boinc      4096 Jun  3 19:04 pilot3
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc       523 Jun  3 19:06 boinc_task_state.xml
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc       961 Jun  3 19:06 memory_monitor_summary.json
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc     21489 Jun  3 19:06 log.45006595._048162.job.log.tgz.1
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc        95 Jun  3 19:08 pilot_heartbeat.json
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc      8346 Jun  3 19:08 heartbeat.json
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc      4661 Jun  3 19:09 pilotlog.txt
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc     79869 Jun  3 19:09 log.45006595._048162.job.log.1
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc        22 Jun  3 19:09 wrapper_checkpoint.txt
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:09 boinc_mmap_file
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc       188 Jun  3 19:09 output.list
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:09 runtime_log
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc    122880 Jun  3 19:09 result.tar.gz
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc      8484 Jun  3 19:09 runtime_log.err
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc       645 Jun  3 19:09 OWsKDm7Sqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoVmKDm1yEAFo.diag
[2025-06-03 19:09:14] -rw-r--r--. 1 boinc boinc     21836 Jun  3 19:09 stderr.txt
[2025-06-03 19:09:14] No HITS result produced
[2025-06-03 19:09:14]  *** Contents of shared directory: ***
[2025-06-03 19:09:14] total 214032
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc 218512154 Jun  3 19:04 ATLAS.root_0
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:04 start_atlas.sh
[2025-06-03 19:09:14] -rw-r--r--. 2 boinc boinc    508879 Jun  3 19:04 input.tar.gz
[2025-06-03 19:09:14] -rw-------. 1 boinc boinc    122880 Jun  3 19:09 result.tar.gz
19:09:15 (2759192): run_atlas exited; CPU time 27.020629
19:09:15 (2759192): called boinc_finish(0)

</stderr_txt>
]]>

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