Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:31:10 (936422): wrapper (7.7.26015): starting
14:31:10 (936422): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:31:10] Arguments: --nthreads 8
[2025-06-03 14:31:10] Threads: 8
[2025-06-03 14:31:10] Checking for CVMFS
[2025-06-03 14:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:31:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:31:10] 2.12.6.0 5613 262 63868 146752 2 186 27198383 40960001 2953 16776704 0 1801672 99.999 79403 48983 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:31:10] CVMFS is ok
[2025-06-03 14:31:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:31:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:31:10] Further information can be found at the LHC@home message board.
[2025-06-03 14:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:31:10] Checking for apptainer binary...
[2025-06-03 14:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:31:10] Running /usr/bin/apptainer --version
[2025-06-03 14:31:10] apptainer version 1.4.1-1.el9
[2025-06-03 14:31:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:31:10] c6-8-12-2.aglt2.org
[2025-06-03 14:31:10] apptainer works
[2025-06-03 14:31:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:31:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:31:10] Starting ATLAS job with PandaID=6677616708
[2025-06-03 14:31:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:48:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:48:20]  protocol_id=None
[2025-06-03 15:48:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 15:48:20]  replicas=None
[2025-06-03 15:48:20]  scope=mc23_13p6TeV
[2025-06-03 15:48:20]  status=None
[2025-06-03 15:48:20]  status_code=0
[2025-06-03 15:48:20]  storage_token=
[2025-06-03 15:48:20]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677616708/log.45006595._031539.job.log.tgz.1
[2025-06-03 15:48:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/56/log.45006595._031539.job.log.tgz.1
[2025-06-03 15:48:20]  workdir=None
[2025-06-03 15:48:20] ]
[2025-06-03 15:48:20] 2025-06-03 19:47:55,176 | INFO     | transferring file log.45006595._031539.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677616708/log.45006595._031539.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 15:48:20] 2025-06-03 19:47:55,176 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677616708/log.45006595._031539.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._031539.job
[2025-06-03 15:48:20] 2025-06-03 19:47:55,188 | INFO     | adding to output.list: log.45006595._031539.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/56/log.45006595._031539.job.log.tg
[2025-06-03 15:48:20] 2025-06-03 19:47:55,188 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 15:48:20] 2025-06-03 19:47:55,188 | INFO     | summary of transferred files:
[2025-06-03 15:48:20] 2025-06-03 19:47:55,188 | INFO     |  -- lfn=log.45006595._031539.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 15:48:20] 2025-06-03 19:47:55,188 | INFO     | stage-out finished correctly
[2025-06-03 15:48:20] 2025-06-03 19:47:56,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 15:48:20] 2025-06-03 19:47:57,600 | INFO     | job 6677616708 has state=finished
[2025-06-03 15:48:20] 2025-06-03 19:47:57,600 | INFO     | preparing for final server update for job 6677616708 in state='finished'
[2025-06-03 15:48:20] 2025-06-03 19:47:57,649 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 15:48:20] 2025-06-03 19:47:57,650 | INFO     | this job has now completed (state=finished)
[2025-06-03 15:48:20] 2025-06-03 19:47:57,650 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 15:48:20] 2025-06-03 19:47:57,650 | INFO     | log transfer has been attempted: DONE
[2025-06-03 15:48:20] 2025-06-03 19:47:57,650 | INFO     | job 6677616708 has finished - writing final server update
[2025-06-03 15:48:20] 2025-06-03 19:47:57,650 | INFO     | total number of processed events: 400 (read)
[2025-06-03 15:48:20] 2025-06-03 19:47:57,664 | INFO     | executing command: lscpu
[2025-06-03 15:48:20] 2025-06-03 19:47:57,720 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 15:48:20] 2025-06-03 19:47:59,807 | INFO     | PID=944133 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 15:48:20] 2025-06-03 19:47:59,807 | INFO     | .. there are 6 such processes running
[2025-06-03 15:48:20] 2025-06-03 19:48:00,102 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 15:48:20] 2025-06-03 19:48:00,102 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677616708/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:48:20] 2025-06-03 19:48:00,103 | INFO     | extracted standard info from prmon json
[2025-06-03 15:48:20] 2025-06-03 19:48:00,103 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:48:20] 2025-06-03 19:48:00,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:48:20] 2025-06-03 19:48:00,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:48:20] 2025-06-03 19:48:00,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | sum of square deviations: 97479037.0
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | sum of deviations: 7086583530.499999
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | mean x: 1748977846.5
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | mean y: 2126229.8088235296
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | -- intersect: -127146007191.0851
[2025-06-03 15:48:20] 2025-06-03 19:48:00,104 | INFO     | intersect: -127146007191.0851
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | chi2: 0.8054796398307407
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | -- intersect: -127146007191.0851
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | current memory leak: 72.70 B/s (using 68 data points, chi2=0.81)
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | ..............................
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . Timing measurements:
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . get job = 0 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . initial setup = 2 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . payload setup = 4 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . stage-in = 0 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . payload execution = 4576 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . stage-out = 0 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | . log creation = 0 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,105 | INFO     | ..............................
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | 
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | job summary report
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | --------------------------------------------------
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | PanDA job id: 6677616708
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | task id: 45006595
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | errors: (none)
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | pilot state: finished 
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | transexitcode: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | exeerrorcode: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | exeerrordiag: 
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | exitcode: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | exitmsg: OK
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | cpuconsumptiontime: 31302 s
[2025-06-03 15:48:20] 2025-06-03 19:48:00,637 | INFO     | nevents: 400
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | neventsw: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | pid: 974570
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | pgrp: 974570
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | corecount: 8
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | event service: False
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | sizes: {0: 2405133, 3: 2405339, 11: 2405367, 4584: 2440393, 4585: 2440393, 4589: 2440563}
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | --------------------------------------------------
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | 
[2025-06-03 15:48:20] 2025-06-03 19:48:00,638 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | job 6677616708 has completed (purged errors)
[2025-06-03 15:48:20] 2025-06-03 19:48:00,651 | INFO     | overall cleanup function is called
[2025-06-03 15:48:20] 2025-06-03 19:48:01,149 | WARNING  | process 974570 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 15:48:20] 2025-06-03 19:48:01,256 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:48:20] 2025-06-03 19:48:01,257 | INFO     | reaping zombies for max 20 seconds
[2025-06-03 15:48:20] 2025-06-03 19:48:01,267 | INFO     | checking for looping job (in state=finished)
[2025-06-03 15:48:20] 2025-06-03 19:48:01,267 | INFO     | using looping job limit: 7200 s
[2025-06-03 15:48:20] 2025-06-03 19:48:01,397 | INFO     | number of running child processes to parent process 974570: 1
[2025-06-03 15:48:20] 2025-06-03 19:48:01,397 | INFO     | maximum number of monitored processes: 6
[2025-06-03 15:48:20] 2025-06-03 19:48:01,397 | INFO     | aborting job monitoring since job object (job id=6677616708) has expired
[2025-06-03 15:48:20] 2025-06-03 19:48:01,658 | INFO     | --- collectZombieJob: --- 10, [974570]
[2025-06-03 15:48:20] 2025-06-03 19:48:01,658 | INFO     | zombie collector waiting for pid 974570
[2025-06-03 15:48:20] 2025-06-03 19:48:01,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:48:20] 2025-06-03 19:48:01,659 | INFO     | collected zombie processes
[2025-06-03 15:48:20] 2025-06-03 19:48:01,659 | INFO     | will attempt to kill all subprocesses of pid=974570
[2025-06-03 15:48:20] 2025-06-03 19:48:01,792 | INFO     | process IDs to be killed: [974570] (in reverse order)
[2025-06-03 15:48:20] 2025-06-03 19:48:01,838 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:48:20] 2025-06-03 19:48:01,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:48:20] 2025-06-03 19:48:01,844 | INFO     | did not find any defunct processes belonging to 974570
[2025-06-03 15:48:20] 2025-06-03 19:48:01,848 | INFO     | did not find any defunct processes belonging to 974570
[2025-06-03 15:48:20] 2025-06-03 19:48:01,848 | INFO     | ready for new job
[2025-06-03 15:48:20] 2025-06-03 19:48:01,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:48:20] 2025-06-03 19:48:01,849 | INFO     | **************************************
[2025-06-03 15:48:20] 2025-06-03 19:48:01,850 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:48:20] 2025-06-03 19:48:01,850 | INFO     | **************************************
[2025-06-03 15:48:20] 2025-06-03 19:48:01,850 | INFO     | 
[2025-06-03 15:48:20] 2025-06-03 19:48:01,863 | INFO     | architecture information:
[2025-06-03 15:48:20] 2025-06-03 19:48:01,863 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:48:20] 2025-06-03 19:48:01,872 | INFO     | cat /etc/os-release:
[2025-06-03 15:48:20] NAME="CentOS Linux"
[2025-06-03 15:48:20] VERSION="7 (Core)"
[2025-06-03 15:48:20] ID="centos"
[2025-06-03 15:48:20] ID_LIKE="rhel fedora"
[2025-06-03 15:48:20] VERSION_ID="7"
[2025-06-03 15:48:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:48:20] ANSI_COLOR="0;31"
[2025-06-03 15:48:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:48:20] HOME_URL="https://www.centos.org/"
[2025-06-03 15:48:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:48:20] 
[2025-06-03 15:48:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:48:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:48:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:48:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:48:20] 
[2025-06-03 15:48:20] 2025-06-03 19:48:01,872 | INFO     | **************************************
[2025-06-03 15:48:20] 2025-06-03 19:48:02,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | INFO     | sufficient remaining disk space (53249835008 B)
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | INFO     | update_server=False
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:48:20] 2025-06-03 19:48:02,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:48:20] 2025-06-03 19:48:02,385 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:48:20] 2025-06-03 19:48:02,385 | INFO     | will abort loop
[2025-06-03 15:48:20] 2025-06-03 19:48:02,385 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:48:20] 2025-06-03 19:48:02,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:48:20] 2025-06-03 19:48:02,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:48:20] 2025-06-03 19:48:02,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:48:20] 2025-06-03 19:48:02,716 | INFO     | all data control threads have been joined
[2025-06-03 15:48:20] 2025-06-03 19:48:03,055 | INFO     | all job control threads have been joined
[2025-06-03 15:48:20] 2025-06-03 19:48:03,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:48:20] 2025-06-03 19:48:03,389 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:03,391 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:03,417 | INFO     | all payload control threads have been joined
[2025-06-03 15:48:20] 2025-06-03 19:48:03,721 | INFO     | [data] control thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:03,771 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:03,787 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,060 | INFO     | [job] control thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,297 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,422 | INFO     | [payload] control thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,746 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,757 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,771 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:04,851 | INFO     | [job] validate thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:05,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:48:20] 2025-06-03 19:48:05,249 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:06,166 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:06,401 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:12,693 | INFO     | job.realtimelogging is not enabled
[2025-06-03 15:48:20] 2025-06-03 19:48:13,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:48:20] 2025-06-03 19:48:15,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717921474368)>', '<ExcThread(monitor, started 140717280192256)>']
[2025-06-03 15:48:20] 2025-06-03 19:48:16,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:48:20] 2025-06-03 19:48:16,456 | INFO     | [monitor] control thread has ended
[2025-06-03 15:48:20] 2025-06-03 19:48:20,709 | INFO     | all workflow threads have been joined
[2025-06-03 15:48:20] 2025-06-03 19:48:20,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:48:20] 2025-06-03 19:48:20,710 | INFO     | traces error code: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:20,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:48:20] 2025-06-03 19:48:20,792 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:48:20] 2025-06-03 19:48:20,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:48:20] 2025-06-03 19:48:20,795 [wrapper] pilotpid: 944133
[2025-06-03 15:48:20] 2025-06-03 19:48:20,797 [wrapper] Pilot exit status: 0
[2025-06-03 15:48:20] 2025-06-03 19:48:20,803 [wrapper] pandaids: 6677616708
[2025-06-03 15:48:20] 2025-06-03 19:48:20,835 [wrapper] cleanup supervisor_pilot 1178110 944134
[2025-06-03 15:48:20] 2025-06-03 19:48:20,837 [wrapper] Test setup, not cleaning
[2025-06-03 15:48:20] 2025-06-03 19:48:20,839 [wrapper] apfmon messages muted
[2025-06-03 15:48:20] 2025-06-03 19:48:20,841 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:48:20] 2025-06-03 19:48:20,842 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:48:20]  *** Error codes and diagnostics ***
[2025-06-03 15:48:20]     "exeErrorCode": 0,
[2025-06-03 15:48:20]     "exeErrorDiag": "",
[2025-06-03 15:48:20]     "pilotErrorCode": 0,
[2025-06-03 15:48:20]     "pilotErrorDiag": "",
[2025-06-03 15:48:20]  *** Listing of results directory ***
[2025-06-03 15:48:20] total 386532
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:55 queuedata.json
[2025-06-03 15:48:20] -rwx------. 1 boincer umatlas     37140 Jun  3 07:56 runpilot2-wrapper.sh
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:48:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:31 run_atlas
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:31 job.xml
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas 212761042 Jun  3 14:31 EVNT.45006593._001268.pool.root.1
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:31 start_atlas.sh
[2025-06-03 15:48:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:31 shared
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 14:31 input.tar.gz
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:31 boinc_lockfile
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 14:31 pandaJob.out
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas    986893 Jun  3 14:31 agis_schedconf.cvmfs.json
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas   1603667 Jun  3 14:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:48:20] drwx------. 4 boincer umatlas      4096 Jun  3 14:31 pilot3
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 15:36 init_data.xml
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:47 boinc_task_state.xml
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas 177668394 Jun  3 15:47 HITS.45006595._031539.pool.root.1
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas        95 Jun  3 15:47 pilot_heartbeat.json
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas      1032 Jun  3 15:47 memory_monitor_summary.json
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas    316911 Jun  3 15:47 log.45006595._031539.job.log.tgz.1
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas      7711 Jun  3 15:48 heartbeat.json
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas        27 Jun  3 15:48 wrapper_checkpoint.txt
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 15:48 boinc_mmap_file
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas      4550 Jun  3 15:48 pilotlog.txt
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas    454058 Jun  3 15:48 log.45006595._031539.job.log.1
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas       357 Jun  3 15:48 output.list
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:48 runtime_log
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas    788480 Jun  3 15:48 result.tar.gz
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas       652 Jun  3 15:48 wpOLDmSRfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWXYKDm3FjY6m.diag
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 15:48 runtime_log.err
[2025-06-03 15:48:20] -rw-r--r--. 1 boincer umatlas     21670 Jun  3 15:48 stderr.txt
[2025-06-03 15:48:20] HITS file was successfully produced:
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas 177668394 Jun  3 15:47 shared/HITS.pool.root.1
[2025-06-03 15:48:20]  *** Contents of shared directory: ***
[2025-06-03 15:48:20] total 382580
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas 212761042 Jun  3 14:31 ATLAS.root_0
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:31 start_atlas.sh
[2025-06-03 15:48:20] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 14:31 input.tar.gz
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas 177668394 Jun  3 15:47 HITS.pool.root.1
[2025-06-03 15:48:20] -rw-------. 1 boincer umatlas    788480 Jun  3 15:48 result.tar.gz
15:48:22 (936422): run_atlas exited; CPU time 31400.756837
15:48:22 (936422): called boinc_finish(0)

</stderr_txt>
]]>

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